Bhi06G000379 (gene) Wax gourd

Overview
NameBhi06G000379
Typegene
OrganismBenincasa hispida (Wax gourd)
Description50S ribosomal protein L16
Locationchr6 : 10296170 .. 10296418 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACACGAAATGCACGACGCGGCGGAAAAATATGGGTACGTATATTTCCAGACAAACCCGTTACACTAAGACCCACAGAAACACGTATGGGTTCAGGGAAAGGATCCCCCGAATATTGGGTAGCTGTTGTTAAACCAGGTAGAATACTTTATGAAATGAATGGAGTAGCTGAAAATATAGCCAGAAAAACTATTTCAATAGCGGCATCCAAAATGCCTATACAAACCCAAATCATTACTTCAAGATAG

mRNA sequence

ATGACACGAAATGCACGACGCGGCGGAAAAATATGGGTACGTATATTTCCAGACAAACCCGTTACACTAAGACCCACAGAAACACGTATGGGTTCAGGGAAAGGATCCCCCGAATATTGGGTAGCTGTTGTTAAACCAGGTAGAATACTTTATGAAATGAATGGAGTAGCTGAAAATATAGCCAGAAAAACTATTTCAATAGCGGCATCCAAAATGCCTATACAAACCCAAATCATTACTTCAAGATAG

Coding sequence (CDS)

ATGACACGAAATGCACGACGCGGCGGAAAAATATGGGTACGTATATTTCCAGACAAACCCGTTACACTAAGACCCACAGAAACACGTATGGGTTCAGGGAAAGGATCCCCCGAATATTGGGTAGCTGTTGTTAAACCAGGTAGAATACTTTATGAAATGAATGGAGTAGCTGAAAATATAGCCAGAAAAACTATTTCAATAGCGGCATCCAAAATGCCTATACAAACCCAAATCATTACTTCAAGATAG

Protein sequence

MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMNGVAENIARKTISIAASKMPIQTQIITSR
Homology
[Close]
BLAST of Bhi06G000379 vs. Swiss-Prot
Match: sp|Q4VZN1|RK16_CUCSA (50S ribosomal protein L16, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl16 PE=3 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.6e-38
Identity = 77/81 (95.06%), Postives = 79/81 (97.53%), Query Frame = 0 

Query: 1   MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMNGVAENI 60
           MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEM+GVAENI
Sbjct: 54  MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENI 113

Query: 61  ARKTISIAASKMPIQTQIITS 82
           ARK ISIAASKMPI+TQ ITS
Sbjct: 114 ARKAISIAASKMPIRTQFITS 134

[Close]
BLAST of Bhi06G000379 vs. Swiss-Prot
Match: sp|B1NWI7|RK16_MANES (50S ribosomal protein L16, chloroplastic OS=Manihot esculenta OX=3983 GN=rpl16 PE=3 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.1e-37
Identity = 76/81 (93.83%), Postives = 77/81 (95.06%), Query Frame = 0 

Query: 1   MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMNGVAENI 60
           MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEM GVAENI
Sbjct: 54  MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENI 113

Query: 61  ARKTISIAASKMPIQTQIITS 82
           ARK ISIAASKMPI+TQ I S
Sbjct: 114 ARKAISIAASKMPIRTQFIIS 134

[Close]
BLAST of Bhi06G000379 vs. Swiss-Prot
Match: sp|Q09ME0|RK16_CITSI (50S ribosomal protein L16, chloroplastic OS=Citrus sinensis OX=2711 GN=rpl16 PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 2.4e-37
Identity = 75/81 (92.59%), Postives = 77/81 (95.06%), Query Frame = 0 

Query: 1   MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMNGVAENI 60
           MTRN RRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEM+GVAENI
Sbjct: 55  MTRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENI 114

Query: 61  ARKTISIAASKMPIQTQIITS 82
           ARK ISIAASKMPI+TQ I S
Sbjct: 115 ARKAISIAASKMPIRTQFIIS 135

[Close]
BLAST of Bhi06G000379 vs. Swiss-Prot
Match: sp|Q2L940|RK16_GOSHI (50S ribosomal protein L16, chloroplastic OS=Gossypium hirsutum OX=3635 GN=rpl16 PE=3 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 5.3e-37
Identity = 74/81 (91.36%), Postives = 77/81 (95.06%), Query Frame = 0 

Query: 1   MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMNGVAENI 60
           MTRN RRGGKIWVRIFPDKPVT+RPTETRMGSGKGSPEYWVAVVKPGRILYEM+GVAENI
Sbjct: 54  MTRNVRRGGKIWVRIFPDKPVTVRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENI 113

Query: 61  ARKTISIAASKMPIQTQIITS 82
           ARK ISIAASKMPI+TQ I S
Sbjct: 114 ARKAISIAASKMPIKTQFIIS 134

[Close]
BLAST of Bhi06G000379 vs. Swiss-Prot
Match: sp|B1A972|RK16_CARPA (50S ribosomal protein L16, chloroplastic OS=Carica papaya OX=3649 GN=rpl16 PE=3 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 6.9e-37
Identity = 74/81 (91.36%), Postives = 77/81 (95.06%), Query Frame = 0 

Query: 1   MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMNGVAENI 60
           MTRN RRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEM+GVAENI
Sbjct: 54  MTRNIRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENI 113

Query: 61  ARKTISIAASKMPIQTQIITS 82
           AR+ ISIAASKMPI+TQ I S
Sbjct: 114 ARRAISIAASKMPIKTQFIIS 134

[Close]
BLAST of Bhi06G000379 vs. TAIR10
Match: ATCG00790.1 (ribosomal protein L16)

HSP 1 Score: 149.1 bits (375), Expect = 1.2e-36
Identity = 71/81 (87.65%), Postives = 74/81 (91.36%), Query Frame = 0 

Query: 1   MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMNGVAENI 60
           MTRN RRGGKIWVRIFPDKPVT+RP ETRMGSGKGSPEYWVAVVKPG+ILYEM GV ENI
Sbjct: 54  MTRNVRRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENI 113

Query: 61  ARKTISIAASKMPIQTQIITS 82
           ARK ISIAASKMPI+TQ I S
Sbjct: 114 ARKAISIAASKMPIKTQFIIS 134

[Close]
BLAST of Bhi06G000379 vs. TAIR10
Match: AT2G28830.1 (PLANT U-BOX 12)

HSP 1 Score: 113.6 bits (283), Expect = 5.7e-26
Identity = 53/82 (64.63%), Postives = 66/82 (80.49%), Query Frame = 0 

Query: 1   MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMNGVAENI 60
           MTRN  RG  + V IF DKPVT+RP ETRMG GKG+P +WVAVVKPG+I+YEM GV+E +
Sbjct: 881 MTRNIGRGLTVRVHIFADKPVTVRPPETRMGRGKGAPAFWVAVVKPGKIIYEMGGVSEKV 940

Query: 61  ARKTISIAASKMPIQTQIITSR 83
           AR+ ISIAASK+P +T+ I S+
Sbjct: 941 AREAISIAASKLPAKTKFIISK 962

[Close]
BLAST of Bhi06G000379 vs. TAIR10
Match: ATMG00080.1 (ribosomal protein L16)

HSP 1 Score: 80.9 bits (198), Expect = 4.1e-16
Identity = 38/79 (48.10%), Postives = 53/79 (67.09%), Query Frame = 0 

Query: 1   MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMNGVAENI 60
           M+   RR GKIWVR+F D P+T +PTE RMG GKG+P  W+A V  G+I +EM+GV+   
Sbjct: 98  MSGQFRRNGKIWVRVFADLPITGKPTEVRMGRGKGNPTGWIARVSTGQIPFEMDGVSLAN 157

Query: 61  ARKTISIAASKMPIQTQII 80
           AR+  ++AA K    T+ +
Sbjct: 158 ARQAATLAAHKPCSSTKFV 176

[Close]
BLAST of Bhi06G000379 vs. TrEMBL
Match: tr|X2EZK1|X2EZK1_LAGSI (50S ribosomal protein L16, chloroplastic OS=Lagenaria siceraria OX=3668 GN=rpl16 PE=3 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 3.3e-36
Identity = 77/81 (95.06%), Postives = 79/81 (97.53%), Query Frame = 0 

Query: 1   MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMNGVAENI 60
           MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEM+GVAENI
Sbjct: 54  MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENI 113

Query: 61  ARKTISIAASKMPIQTQIITS 82
           ARK ISIAASKMPI+TQ ITS
Sbjct: 114 ARKAISIAASKMPIRTQFITS 134

[Close]
BLAST of Bhi06G000379 vs. TrEMBL
Match: tr|A0A286NFT8|A0A286NFT8_CUCME (50S ribosomal protein L16, chloroplastic OS=Cucumis melo var. flexuosus OX=1120798 GN=rpl16 PE=3 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 3.3e-36
Identity = 77/81 (95.06%), Postives = 79/81 (97.53%), Query Frame = 0 

Query: 1   MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMNGVAENI 60
           MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEM+GVAENI
Sbjct: 38  MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENI 97

Query: 61  ARKTISIAASKMPIQTQIITS 82
           ARK ISIAASKMPI+TQ ITS
Sbjct: 98  ARKAISIAASKMPIRTQFITS 118

[Close]
BLAST of Bhi06G000379 vs. TrEMBL
Match: tr|A0A249RY39|A0A249RY39_CUCME (50S ribosomal protein L16, chloroplastic OS=Cucumis melo subsp. agrestis OX=217619 GN=rpl16 PE=3 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 3.3e-36
Identity = 77/81 (95.06%), Postives = 79/81 (97.53%), Query Frame = 0 

Query: 1   MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMNGVAENI 60
           MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEM+GVAENI
Sbjct: 38  MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENI 97

Query: 61  ARKTISIAASKMPIQTQIITS 82
           ARK ISIAASKMPI+TQ ITS
Sbjct: 98  ARKAISIAASKMPIRTQFITS 118

[Close]
BLAST of Bhi06G000379 vs. TrEMBL
Match: tr|A0A1P8LF95|A0A1P8LF95_CITLA (Ribosomal protein L16 OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=rpl16 PE=3 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 3.3e-36
Identity = 77/81 (95.06%), Postives = 79/81 (97.53%), Query Frame = 0 

Query: 1   MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMNGVAENI 60
           MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEM+GVAENI
Sbjct: 38  MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENI 97

Query: 61  ARKTISIAASKMPIQTQIITS 82
           ARK ISIAASKMPI+TQ ITS
Sbjct: 98  ARKAISIAASKMPIRTQFITS 118

[Close]
BLAST of Bhi06G000379 vs. TrEMBL
Match: tr|A0A218KG73|A0A218KG73_CUCSA (50S ribosomal protein L16, chloroplastic OS=Cucumis sativus var. hardwickii OX=319220 GN=rpl16 PE=3 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 3.3e-36
Identity = 77/81 (95.06%), Postives = 79/81 (97.53%), Query Frame = 0 

Query: 1   MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMNGVAENI 60
           MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEM+GVAENI
Sbjct: 54  MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENI 113

Query: 61  ARKTISIAASKMPIQTQIITS 82
           ARK ISIAASKMPI+TQ ITS
Sbjct: 114 ARKAISIAASKMPIRTQFITS 134

[Close]
BLAST of Bhi06G000379 vs. NCBI nr
Match: BAH95844.1 (ribosomal protein L16, partial (chloroplast) [Asparagus officinalis])

HSP 1 Score: 159.5 bits (402), Expect = 5.0e-36
Identity = 77/81 (95.06%), Postives = 79/81 (97.53%), Query Frame = 0 

Query: 1   MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMNGVAENI 60
           MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEM+GVAENI
Sbjct: 37  MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENI 96

Query: 61  ARKTISIAASKMPIQTQIITS 82
           ARK ISIAASKMPI+TQ ITS
Sbjct: 97  ARKAISIAASKMPIRTQFITS 117

[Close]
BLAST of Bhi06G000379 vs. NCBI nr
Match: AHM88685.1 (ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM88744.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM88802.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM88860.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM88917.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM88975.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM89034.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM89093.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM89152.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM89211.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM89270.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM89330.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM89389.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM89448.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM89507.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM89567.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM89626.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM89685.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM89744.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM89803.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM89862.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM89921.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM89980.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM90039.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM90098.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM90157.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM90216.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM90275.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM90334.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM90393.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM90452.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM90511.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM90570.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM90629.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM90688.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM90747.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM90806.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM90865.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM90924.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM90983.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM91042.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM91100.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM91160.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM91218.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM91275.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria])

HSP 1 Score: 159.5 bits (402), Expect = 5.0e-36
Identity = 77/81 (95.06%), Postives = 79/81 (97.53%), Query Frame = 0 

Query: 1   MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMNGVAENI 60
           MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEM+GVAENI
Sbjct: 54  MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENI 113

Query: 61  ARKTISIAASKMPIQTQIITS 82
           ARK ISIAASKMPI+TQ ITS
Sbjct: 114 ARKAISIAASKMPIRTQFITS 134

[Close]
BLAST of Bhi06G000379 vs. NCBI nr
Match: ABI97454.1 (ribosomal protein L16, partial (chloroplast) [Cucumis sativus] >ABI98783.1 ribosomal protein L16, partial (chloroplast) [Cucumis sativus] >ARQ16116.1 ribosomal protein L16, partial (chloroplast) [Cucumis sativus] >ARQ16199.1 ribosomal protein L16, partial (chloroplast) [Cucumis sativus] >ARQ16282.1 ribosomal protein L16, partial (chloroplast) [Cucumis sativus] >ARQ16365.1 ribosomal protein L16, partial (chloroplast) [Cucumis sativus])

HSP 1 Score: 159.5 bits (402), Expect = 5.0e-36
Identity = 77/81 (95.06%), Postives = 79/81 (97.53%), Query Frame = 0 

Query: 1   MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMNGVAENI 60
           MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEM+GVAENI
Sbjct: 52  MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENI 111

Query: 61  ARKTISIAASKMPIQTQIITS 82
           ARK ISIAASKMPI+TQ ITS
Sbjct: 112 ARKAISIAASKMPIRTQFITS 132

[Close]
BLAST of Bhi06G000379 vs. NCBI nr
Match: YP_009326027.1 (ribosomal protein L16 (chloroplast) [Citrullus lanatus] >YP_009348069.1 ribosomal protein L16 (plastid) [Citrullus mucosospermus] >YP_009420832.1 ribosomal protein L16 (chloroplast) [Citrullus colocynthis] >YP_009431680.1 ribosomal protein L16 (chloroplast) [Citrullus rehmii] >YP_009447488.1 ribosomal protein L16 (chloroplast) [Cucurbita maxima] >YP_009456183.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >APD52518.1 ribosomal protein L16 (chloroplast) [Citrullus lanatus] >APW82755.1 ribosomal protein L16 (plastid) [Citrullus mucosospermus] >APW82840.1 ribosomal protein L16 (plastid) [Citrullus mucosospermus] >APW82925.1 ribosomal protein L16 (plastid) [Citrullus lanatus subsp. vulgaris] >APW83010.1 ribosomal protein L16 (plastid) [Citrullus lanatus subsp. vulgaris] >APW83095.1 ribosomal protein L16 (plastid) [Citrullus lanatus subsp. vulgaris] >APW83180.1 ribosomal protein L16 (plastid) [Citrullus lanatus subsp. vulgaris] >APW83265.1 ribosomal protein L16 (plastid) [Citrullus lanatus subsp. vulgaris] >APW83350.1 ribosomal protein L16 (plastid) [Citrullus mucosospermus] >ASP44499.1 ribosomal protein L16 (chloroplast) [Citrullus colocynthis] >ASY96285.1 ribosomal protein L16 (chloroplast) [Citrullus rehmii] >ATY69908.1 ribosomal protein L16 (chloroplast) [Cucurbita maxima] >AUJ21948.1 ribosomal protein L16 (chloroplast) [Lagenaria siceraria])

HSP 1 Score: 159.5 bits (402), Expect = 5.0e-36
Identity = 77/81 (95.06%), Postives = 79/81 (97.53%), Query Frame = 0 

Query: 1   MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMNGVAENI 60
           MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEM+GVAENI
Sbjct: 38  MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENI 97

Query: 61  ARKTISIAASKMPIQTQIITS 82
           ARK ISIAASKMPI+TQ ITS
Sbjct: 98  ARKAISIAASKMPIRTQFITS 118

[Close]
BLAST of Bhi06G000379 vs. NCBI nr
Match: ASY96370.1 (ribosomal protein L16 (chloroplast) [Cucumis melo subsp. agrestis] >ASY96457.1 ribosomal protein L16 (chloroplast) [Cucumis melo subsp. agrestis] >ASY96544.1 ribosomal protein L16 (chloroplast) [Cucumis melo subsp. agrestis] >ASY96630.1 ribosomal protein L16 (chloroplast) [Cucumis melo var. conomon] >ASY96718.1 ribosomal protein L16 (chloroplast) [Cucumis melo var. makuwa] >ASY96805.1 ribosomal protein L16 (chloroplast) [Cucumis melo var. momordica] >ASY96892.1 ribosomal protein L16 (chloroplast) [Cucumis melo var. dudaim] >ASY96979.1 ribosomal protein L16 (chloroplast) [Cucumis melo var. cantalupo] >ASY97066.1 ribosomal protein L16 (chloroplast) [Cucumis melo var. cantalupo] >ASY97153.1 ribosomal protein L16 (chloroplast) [Cucumis melo var. inodorus] >ASY97240.1 ribosomal protein L16 (chloroplast) [Cucumis melo var. cantalupo] >ASY97327.1 ribosomal protein L16 (chloroplast) [Cucumis melo var. flexuosus] >ASY97414.1 ribosomal protein L16 (chloroplast) [Cucumis melo var. flexuosus] >ASY97502.1 ribosomal protein L16 (chloroplast) [Cucumis sativus var. hardwickii])

HSP 1 Score: 159.5 bits (402), Expect = 5.0e-36
Identity = 77/81 (95.06%), Postives = 79/81 (97.53%), Query Frame = 0 

Query: 1   MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMNGVAENI 60
           MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEM+GVAENI
Sbjct: 38  MTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENI 97

Query: 61  ARKTISIAASKMPIQTQIITS 82
           ARK ISIAASKMPI+TQ ITS
Sbjct: 98  ARKAISIAASKMPIRTQFITS 118

The following BLAST results are available for this feature:
BLAST of Bhi06G000379 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q4VZN1|RK16_CUCSA1.6e-3895.0650S ribosomal protein L16, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl16 PE=... [more]
sp|B1NWI7|RK16_MANES1.1e-3793.8350S ribosomal protein L16, chloroplastic OS=Manihot esculenta OX=3983 GN=rpl16 P... [more]
sp|Q09ME0|RK16_CITSI2.4e-3792.5950S ribosomal protein L16, chloroplastic OS=Citrus sinensis OX=2711 GN=rpl16 PE=... [more]
sp|Q2L940|RK16_GOSHI5.3e-3791.3650S ribosomal protein L16, chloroplastic OS=Gossypium hirsutum OX=3635 GN=rpl16 ... [more]
sp|B1A972|RK16_CARPA6.9e-3791.3650S ribosomal protein L16, chloroplastic OS=Carica papaya OX=3649 GN=rpl16 PE=3 ... [more]
BLAST of Bhi06G000379 vs. TAIR10
Match NameE-valueIdentityDescription
ATCG00790.11.2e-3687.65ribosomal protein L16[more]
AT2G28830.15.7e-2664.63PLANT U-BOX 12[more]
ATMG00080.14.1e-1648.10ribosomal protein L16[more]
BLAST of Bhi06G000379 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|X2EZK1|X2EZK1_LAGSI3.3e-3695.0650S ribosomal protein L16, chloroplastic OS=Lagenaria siceraria OX=3668 GN=rpl16... [more]
tr|A0A286NFT8|A0A286NFT8_CUCME3.3e-3695.0650S ribosomal protein L16, chloroplastic OS=Cucumis melo var. flexuosus OX=11207... [more]
tr|A0A249RY39|A0A249RY39_CUCME3.3e-3695.0650S ribosomal protein L16, chloroplastic OS=Cucumis melo subsp. agrestis OX=2176... [more]
tr|A0A1P8LF95|A0A1P8LF95_CITLA3.3e-3695.06Ribosomal protein L16 OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=rpl16 PE... [more]
tr|A0A218KG73|A0A218KG73_CUCSA3.3e-3695.0650S ribosomal protein L16, chloroplastic OS=Cucumis sativus var. hardwickii OX=3... [more]
BLAST of Bhi06G000379 vs. NCBI nr
Match NameE-valueIdentityDescription
BAH95844.15.0e-3695.06ribosomal protein L16, partial (chloroplast) [Asparagus officinalis][more]
AHM88685.15.0e-3695.06ribosomal protein L16 (chloroplast) [Lagenaria siceraria] >AHM88744.1 ribosomal ... [more]
ABI97454.15.0e-3695.06ribosomal protein L16, partial (chloroplast) [Cucumis sativus] >ABI98783.1 ribos... [more]
YP_009326027.15.0e-3695.06ribosomal protein L16 (chloroplast) [Citrullus lanatus] >YP_009348069.1 ribosoma... [more]
ASY96370.15.0e-3695.06ribosomal protein L16 (chloroplast) [Cucumis melo subsp. agrestis] >ASY96457.1 r... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0019843rRNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR020798Ribosomal_L16_CS
IPR016180Ribosomal_L10e/L16
IPR036920Ribosomal_L10e/L16_sf
IPR000114Ribosomal_L16
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0009507 chloroplast
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi06M000379Bhi06M000379mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000114Ribosomal protein L16PRINTSPR00060RIBOSOMALL16coord: 35..64
score: 55.6
coord: 5..34
score: 67.87
IPR000114Ribosomal protein L16TIGRFAMTIGR01164TIGR01164coord: 1..74
e-value: 6.7E-35
score: 117.9
IPR000114Ribosomal protein L16PANTHERPTHR1222050S/60S RIBOSOMAL PROTEIN L16coord: 1..81
IPR036920Ribosomal protein L10e/L16 superfamilyGENE3DG3DSA:3.90.1170.10coord: 1..82
e-value: 4.4E-32
score: 113.4
IPR036920Ribosomal protein L10e/L16 superfamilySUPERFAMILYSSF54686Ribosomal protein L16p/L10ecoord: 1..81
IPR016180Ribosomal protein L10e/L16PFAMPF00252Ribosomal_L16coord: 2..79
e-value: 3.7E-28
score: 98.1
IPR016180Ribosomal protein L10e/L16CDDcd01433Ribosomal_L16_L10ecoord: 1..79
e-value: 3.34614E-32
score: 108.733
IPR020798Ribosomal protein L16, conserved sitePROSITEPS00586RIBOSOMAL_L16_1coord: 6..17
IPR020798Ribosomal protein L16, conserved sitePROSITEPS00701RIBOSOMAL_L16_2coord: 29..40

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi06G000379Wild cucumber (PI 183967)cpiwgoB267
Bhi06G000379Wild cucumber (PI 183967)cpiwgoB473
Bhi06G000379Cucumber (Chinese Long) v3cucwgoB003
Bhi06G000379Cucumber (Chinese Long) v3cucwgoB270
Bhi06G000379Cucumber (Chinese Long) v3cucwgoB482
Bhi06G000379Cucumber (Chinese Long) v2cuwgoB002
Bhi06G000379Cucumber (Chinese Long) v2cuwgoB267
Bhi06G000379Cucumber (Chinese Long) v2cuwgoB470
Bhi06G000379Bottle gourd (USVL1VR-Ls)lsiwgoB207
Bhi06G000379Bottle gourd (USVL1VR-Ls)lsiwgoB210
Bhi06G000379Bottle gourd (USVL1VR-Ls)lsiwgoB313
Bhi06G000379Melon (DHL92) v3.6.1medwgoB020
Bhi06G000379Melon (DHL92) v3.6.1medwgoB152
Bhi06G000379Melon (DHL92) v3.6.1medwgoB392
Bhi06G000379Melon (DHL92) v3.5.1mewgoB149
Bhi06G000379Melon (DHL92) v3.5.1mewgoB391
Bhi06G000379Watermelon (Charleston Gray)wcgwgoB016
Bhi06G000379Watermelon (Charleston Gray)wcgwgoB111
Bhi06G000379Watermelon (97103) v2wgowmbB114
Bhi06G000379Watermelon (97103) v2wgowmbB151
Bhi06G000379Watermelon (97103) v1wgowmB115
Bhi06G000379Watermelon (97103) v1wgowmB122
Bhi06G000379Silver-seed gourdcarwgoB0339
Bhi06G000379Silver-seed gourdcarwgoB0597
Bhi06G000379Silver-seed gourdcarwgoB0801
Bhi06G000379Silver-seed gourdcarwgoB1174
Bhi06G000379Melon (DHL92) v3.5.1mewgoB022
Bhi06G000379Wax gourdwgowgoB000
Bhi06G000379Cucumber (Gy14) v1cgywgoB138
Bhi06G000379Cucumber (Gy14) v1cgywgoB308
Bhi06G000379Cucumber (Gy14) v1cgywgoB679
Bhi06G000379Cucumber (Gy14) v2cgybwgoB002
Bhi06G000379Cucumber (Gy14) v2cgybwgoB255
Bhi06G000379Cucumber (Gy14) v2cgybwgoB447
Bhi06G000379Cucurbita maxima (Rimu)cmawgoB0101
Bhi06G000379Cucurbita maxima (Rimu)cmawgoB0238
Bhi06G000379Cucurbita maxima (Rimu)cmawgoB0314
Bhi06G000379Cucurbita maxima (Rimu)cmawgoB0380
Bhi06G000379Cucurbita maxima (Rimu)cmawgoB0503
Bhi06G000379Cucurbita maxima (Rimu)cmawgoB0839
Bhi06G000379Cucurbita moschata (Rifu)cmowgoB0094
Bhi06G000379Cucurbita moschata (Rifu)cmowgoB0231
Bhi06G000379Cucurbita moschata (Rifu)cmowgoB0302
Bhi06G000379Cucurbita moschata (Rifu)cmowgoB0374
Bhi06G000379Cucurbita moschata (Rifu)cmowgoB0836
Bhi06G000379Cucurbita pepo (Zucchini)cpewgoB0024
Bhi06G000379Cucurbita pepo (Zucchini)cpewgoB0239
Bhi06G000379Cucurbita pepo (Zucchini)cpewgoB0502
Bhi06G000379Cucurbita pepo (Zucchini)cpewgoB0625
Bhi06G000379Wild cucumber (PI 183967)cpiwgoB003