Bhi06G000128 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi06G000128
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Thaumatin
Location	chr6 : 3247972 .. 3248133 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTTAATAAGCCGGAATATTGTTGCAGTGGAGACCATAATCAGCCGGAAACTTGCCCGCCGACGAATTATTCGAAGGTATTCAAGAGCCAATGTCCTCAAGCTTATAGTTATGCATATGATGATAAGAAGTACATTTACTTGCTCGGGTGGAGCTAA

mRNA sequence

ATGGCTTTTAATAAGCCGGAATATTGTTGCAGTGGAGACCATAATCAGCCGGAAACTTGCCCGCCGACGAATTATTCGAAGGTATTCAAGAGCCAATGTCCTCAAGCTTATAGTTATGCATATGATGATAAGAAGTACATTTACTTGCTCGGGTGGAGCTAA

Coding sequence (CDS)

ATGGCTTTTAATAAGCCGGAATATTGTTGCAGTGGAGACCATAATCAGCCGGAAACTTGCCCGCCGACGAATTATTCGAAGGTATTCAAGAGCCAATGTCCTCAAGCTTATAGTTATGCATATGATGATAAGAAGTACATTTACTTGCTCGGGTGGAGCTAA

Protein sequence

MAFNKPEYCCSGDHNQPETCPPTNYSKVFKSQCPQAYSYAYDDKKYIYLLGWS

Homology

[Close]

BLAST of Bhi06G000128 vs. Swiss-Prot
Match: sp|O80327|TLP1_PYRPY (Thaumatin-like protein 1 OS=Pyrus pyrifolia OX=3767 GN=TL1 PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 3.7e-15
Identity = 31/44 (70.45%), Postives = 40/44 (90.91%), Query Frame = 0


Query: 1   MAFNKPEYCCSGDHNQPETCPPTNYSKVFKSQCPQAYSYAYDDK 45
           +A N+P+YCC+G +  P+TCPPT++SKVFK+QCPQAYSYAYDDK
Sbjct: 183 LALNQPQYCCTGAYGTPDTCPPTDFSKVFKNQCPQAYSYAYDDK 226

[Close]

BLAST of Bhi06G000128 vs. Swiss-Prot
Match: sp|P83332|TLP1_PRUPE (Thaumatin-like protein 1 OS=Prunus persica OX=3760 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 6.2e-15
Identity = 31/44 (70.45%), Postives = 41/44 (93.18%), Query Frame = 0


Query: 1   MAFNKPEYCCSGDHNQPETCPPTNYSKVFKSQCPQAYSYAYDDK 45
           +AFN+P+YCC+  +++PETCPP +YSK+FK+QCPQAYSYAYDDK
Sbjct: 185 LAFNQPKYCCTPPNDKPETCPPPDYSKLFKTQCPQAYSYAYDDK 228

[Close]

BLAST of Bhi06G000128 vs. Swiss-Prot
Match: sp|Q9FSG7|TP1A_MALDO (Thaumatin-like protein 1a OS=Malus domestica OX=3750 GN=TL1 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 3.4e-13
Identity = 29/44 (65.91%), Postives = 36/44 (81.82%), Query Frame = 0


Query: 1   MAFNKPEYCCSGDHNQPETCPPTNYSKVFKSQCPQAYSYAYDDK 45
           +AF   +YCC+  +N PETCPPT YS++F+ QCPQAYSYAYDDK
Sbjct: 185 LAFGDSKYCCTPPNNTPETCPPTEYSEIFEKQCPQAYSYAYDDK 228

[Close]

BLAST of Bhi06G000128 vs. Swiss-Prot
Match: sp|P50694|TLP_PRUAV (Glucan endo-1,3-beta-glucosidase OS=Prunus avium OX=42229 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 7.6e-13
Identity = 28/43 (65.12%), Postives = 34/43 (79.07%), Query Frame = 0


Query: 3   FNKPEYCCSGDHNQPETCPPTNYSKVFKSQCPQAYSYAYDDKK 46
           F  P+YCC+   N PETCPPTNYS++F + CP AYSYAYDDK+
Sbjct: 186 FGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKR 228

[Close]

BLAST of Bhi06G000128 vs. Swiss-Prot
Match: sp|P83336|TP1B_MALDO (Thaumatin-like protein 1b (Fragment) OS=Malus domestica OX=3750 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.3e-12
Identity = 28/44 (63.64%), Postives = 36/44 (81.82%), Query Frame = 0


Query: 1   MAFNKPEYCCSGDHNQPETCPPTNYSKVFKSQCPQAYSYAYDDK 45
           +AF   +YCC+  ++ PETCPPT YS++F+ QCPQAYSYAYDDK
Sbjct: 151 LAFGDSKYCCTPPNDTPETCPPTEYSEIFEKQCPQAYSYAYDDK 194

[Close]

BLAST of Bhi06G000128 vs. TAIR10
Match: AT1G19320.1 (Pathogenesis-related thaumatin superfamily protein)

HSP 1 Score: 80.9 bits (198), Expect = 2.6e-16
Identity = 32/42 (76.19%), Postives = 36/42 (85.71%), Query Frame = 0


Query: 2   AFNKPEYCCSGDHNQPETCPPTNYSKVFKSQCPQAYSYAYDD 44
           AFNKPEYCC+G ++ P TCPPTNYSK+FK  CP AYSYAYDD
Sbjct: 188 AFNKPEYCCTGAYSTPATCPPTNYSKIFKQACPSAYSYAYDD 229

[Close]

BLAST of Bhi06G000128 vs. TAIR10
Match: AT1G20030.2 (Pathogenesis-related thaumatin superfamily protein)

HSP 1 Score: 73.9 bits (180), Expect = 3.2e-14
Identity = 29/43 (67.44%), Postives = 35/43 (81.40%), Query Frame = 0


Query: 2   AFNKPEYCCSGDHNQPETCPPTNYSKVFKSQCPQAYSYAYDDK 45
           AF +PEYCCSG    P+TC P+ YS++FKS CP+AYSYAYDDK
Sbjct: 185 AFRQPEYCCSGAFGSPDTCKPSTYSRIFKSACPRAYSYAYDDK 227

[Close]

BLAST of Bhi06G000128 vs. TAIR10
Match: AT1G75040.1 (pathogenesis-related gene 5)

HSP 1 Score: 72.4 bits (176), Expect = 9.4e-14
Identity = 27/42 (64.29%), Postives = 36/42 (85.71%), Query Frame = 0


Query: 3   FNKPEYCCSGDHNQPETCPPTNYSKVFKSQCPQAYSYAYDDK 45
           FN  +YCC G +++PETCPPT+YS++FK+ CP AYSYAYDD+
Sbjct: 181 FNTDQYCCRGANDKPETCPPTDYSRIFKNACPDAYSYAYDDE 222

[Close]

BLAST of Bhi06G000128 vs. TAIR10
Match: AT1G75800.1 (Pathogenesis-related thaumatin superfamily protein)

HSP 1 Score: 71.6 bits (174), Expect = 1.6e-13
Identity = 28/43 (65.12%), Postives = 35/43 (81.40%), Query Frame = 0


Query: 2   AFNKPEYCCSGDHNQPETCPPTNYSKVFKSQCPQAYSYAYDDK 45
           AF  PEYCCSG H  P+TC P++YS +FK+ CP+AYSYAYDD+
Sbjct: 188 AFRTPEYCCSGAHGTPDTCKPSSYSLMFKTACPRAYSYAYDDQ 230

[Close]

BLAST of Bhi06G000128 vs. TAIR10
Match: AT4G36000.1 (Pathogenesis-related thaumatin superfamily protein)

HSP 1 Score: 70.1 bits (170), Expect = 4.7e-13
Identity = 27/42 (64.29%), Postives = 35/42 (83.33%), Query Frame = 0


Query: 2   AFNKPEYCCSGDHNQPETCPPTNYSKVFKSQCPQAYSYAYDD 44
           AF +PEYCCSG +  P++C P+ YS+VFKS CP++YSYAYDD
Sbjct: 79  AFGRPEYCCSGAYGSPDSCKPSMYSQVFKSACPKSYSYAYDD 120

[Close]

BLAST of Bhi06G000128 vs. TrEMBL
Match: tr|A0A1S3C9V1|A0A1S3C9V1_CUCME (thaumatin-like protein 1b OS=Cucumis melo OX=3656 GN=LOC103498630 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 3.4e-18
Identity = 40/44 (90.91%), Postives = 43/44 (97.73%), Query Frame = 0


Query: 1   MAFNKPEYCCSGDHNQPETCPPTNYSKVFKSQCPQAYSYAYDDK 45
           MAFN PEYCCSGDHN+PETCPPTNYSK+FK+QCPQAYSYAYDDK
Sbjct: 185 MAFNTPEYCCSGDHNRPETCPPTNYSKIFKAQCPQAYSYAYDDK 228

[Close]

BLAST of Bhi06G000128 vs. TrEMBL
Match: tr|A0A0A0KXS6|A0A0A0KXS6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G647340 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 5.8e-18
Identity = 40/44 (90.91%), Postives = 42/44 (95.45%), Query Frame = 0


Query: 1   MAFNKPEYCCSGDHNQPETCPPTNYSKVFKSQCPQAYSYAYDDK 45
           MAFNKPEYCCSGDHN PETCPPTNYS++FK QCPQAYSYAYDDK
Sbjct: 184 MAFNKPEYCCSGDHNLPETCPPTNYSRIFKRQCPQAYSYAYDDK 227

[Close]

BLAST of Bhi06G000128 vs. TrEMBL
Match: tr|A0A2J6KWG0|A0A2J6KWG0_LACSA (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_2X20961 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 5.5e-16
Identity = 37/44 (84.09%), Postives = 41/44 (93.18%), Query Frame = 0


Query: 1   MAFNKPEYCCSGDHNQPETCPPTNYSKVFKSQCPQAYSYAYDDK 45
           +AFNKPEYCCSGDHN PETCPPTNYS+ FK+ CP+AYSYAYDDK
Sbjct: 187 VAFNKPEYCCSGDHNTPETCPPTNYSQFFKNLCPKAYSYAYDDK 230

[Close]

BLAST of Bhi06G000128 vs. TrEMBL
Match: tr|A0A0A0KF73|A0A0A0KF73_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G448170 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 7.2e-16
Identity = 36/44 (81.82%), Postives = 43/44 (97.73%), Query Frame = 0


Query: 1   MAFNKPEYCCSGDHNQPETCPPTNYSKVFKSQCPQAYSYAYDDK 45
           MAFNKP+YCCSGDH++PETC PT+YS++FK+QCPQAYSYAYDDK
Sbjct: 166 MAFNKPKYCCSGDHSRPETCHPTDYSRIFKNQCPQAYSYAYDDK 209

[Close]

BLAST of Bhi06G000128 vs. TrEMBL
Match: tr|A0A251SFC1|A0A251SFC1_HELAN (Putative thaumatin OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr14g0433501 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.1e-15
Identity = 36/44 (81.82%), Postives = 40/44 (90.91%), Query Frame = 0


Query: 1   MAFNKPEYCCSGDHNQPETCPPTNYSKVFKSQCPQAYSYAYDDK 45
           +AFNKPEYCC+GDH  PETCPPTNYSK FK+ CP+AYSYAYDDK
Sbjct: 178 VAFNKPEYCCTGDHGTPETCPPTNYSKFFKNLCPKAYSYAYDDK 221

[Close]

BLAST of Bhi06G000128 vs. NCBI nr
Match: XP_008459514.1 (PREDICTED: thaumatin-like protein 1b [Cucumis melo])

HSP 1 Score: 99.0 bits (245), Expect = 5.2e-18
Identity = 40/44 (90.91%), Postives = 43/44 (97.73%), Query Frame = 0


Query: 1   MAFNKPEYCCSGDHNQPETCPPTNYSKVFKSQCPQAYSYAYDDK 45
           MAFN PEYCCSGDHN+PETCPPTNYSK+FK+QCPQAYSYAYDDK
Sbjct: 185 MAFNTPEYCCSGDHNRPETCPPTNYSKIFKAQCPQAYSYAYDDK 228

[Close]

BLAST of Bhi06G000128 vs. NCBI nr
Match: XP_004141614.1 (PREDICTED: thaumatin-like protein 1b [Cucumis sativus] >KGN52611.1 hypothetical protein Csa_5G647340 [Cucumis sativus])

HSP 1 Score: 98.2 bits (243), Expect = 8.8e-18
Identity = 40/44 (90.91%), Postives = 42/44 (95.45%), Query Frame = 0


Query: 1   MAFNKPEYCCSGDHNQPETCPPTNYSKVFKSQCPQAYSYAYDDK 45
           MAFNKPEYCCSGDHN PETCPPTNYS++FK QCPQAYSYAYDDK
Sbjct: 184 MAFNKPEYCCSGDHNLPETCPPTNYSRIFKRQCPQAYSYAYDDK 227

[Close]

BLAST of Bhi06G000128 vs. NCBI nr
Match: XP_022925800.1 (thaumatin-like protein 1b [Cucurbita moschata])

HSP 1 Score: 94.7 bits (234), Expect = 9.8e-17
Identity = 38/48 (79.17%), Postives = 45/48 (93.75%), Query Frame = 0


Query: 1   MAFNKPEYCCSGDHNQPETCPPTNYSKVFKSQCPQAYSYAYDDKKYIY 49
           MAFN+PE+CCSGDHNQP+TCPPT+YSK+FK QCPQAYSYAYDD+  I+
Sbjct: 183 MAFNQPEFCCSGDHNQPQTCPPTDYSKMFKDQCPQAYSYAYDDQTSIF 230

[Close]

BLAST of Bhi06G000128 vs. NCBI nr
Match: XP_023545182.1 (thaumatin-like protein 1b [Cucurbita pepo subsp. pepo])

HSP 1 Score: 92.8 bits (229), Expect = 3.7e-16
Identity = 37/48 (77.08%), Postives = 44/48 (91.67%), Query Frame = 0


Query: 1   MAFNKPEYCCSGDHNQPETCPPTNYSKVFKSQCPQAYSYAYDDKKYIY 49
           MAFN+PE+CC G+HNQP+TCPPTNYSK+FK QCPQAYSYAYDD+  I+
Sbjct: 183 MAFNQPEFCCCGNHNQPQTCPPTNYSKMFKDQCPQAYSYAYDDQTSIF 230

[Close]

BLAST of Bhi06G000128 vs. NCBI nr
Match: XP_022143966.1 (thaumatin-like protein 1b [Momordica charantia])

HSP 1 Score: 92.0 bits (227), Expect = 6.3e-16
Identity = 36/44 (81.82%), Postives = 41/44 (93.18%), Query Frame = 0


Query: 1   MAFNKPEYCCSGDHNQPETCPPTNYSKVFKSQCPQAYSYAYDDK 45
           MAFN PE+CCSGDHNQP+TCPPT YS +FK+QCPQAYSYAYDD+
Sbjct: 183 MAFNTPEFCCSGDHNQPQTCPPTRYSMIFKNQCPQAYSYAYDDR 226

The following BLAST results are available for this feature:

BLAST of Bhi06G000128 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O80327\|TLP1_PYRPY	3.7e-15	70.45	Thaumatin-like protein 1 OS=Pyrus pyrifolia OX=3767 GN=TL1 PE=1 SV=1	[more]
sp\|P83332\|TLP1_PRUPE	6.2e-15	70.45	Thaumatin-like protein 1 OS=Prunus persica OX=3760 PE=2 SV=1	[more]
sp\|Q9FSG7\|TP1A_MALDO	3.4e-13	65.91	Thaumatin-like protein 1a OS=Malus domestica OX=3750 GN=TL1 PE=1 SV=1	[more]
sp\|P50694\|TLP_PRUAV	7.6e-13	65.12	Glucan endo-1,3-beta-glucosidase OS=Prunus avium OX=42229 PE=1 SV=1	[more]
sp\|P83336\|TP1B_MALDO	1.3e-12	63.64	Thaumatin-like protein 1b (Fragment) OS=Malus domestica OX=3750 PE=2 SV=1	[more]

BLAST of Bhi06G000128 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G19320.1	2.6e-16	76.19	Pathogenesis-related thaumatin superfamily protein	[more]
AT1G20030.2	3.2e-14	67.44	Pathogenesis-related thaumatin superfamily protein	[more]
AT1G75040.1	9.4e-14	64.29	pathogenesis-related gene 5	[more]
AT1G75800.1	1.6e-13	65.12	Pathogenesis-related thaumatin superfamily protein	[more]
AT4G36000.1	4.7e-13	64.29	Pathogenesis-related thaumatin superfamily protein	[more]

BLAST of Bhi06G000128 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C9V1\|A0A1S3C9V1_CUCME	3.4e-18	90.91	thaumatin-like protein 1b OS=Cucumis melo OX=3656 GN=LOC103498630 PE=4 SV=1	[more]
tr\|A0A0A0KXS6\|A0A0A0KXS6_CUCSA	5.8e-18	90.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G647340 PE=4 SV=1	[more]
tr\|A0A2J6KWG0\|A0A2J6KWG0_LACSA	5.5e-16	84.09	Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_2X20961 PE=4 SV=1	[more]
tr\|A0A0A0KF73\|A0A0A0KF73_CUCSA	7.2e-16	81.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G448170 PE=4 SV=1	[more]
tr\|A0A251SFC1\|A0A251SFC1_HELAN	2.1e-15	81.82	Putative thaumatin OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr14g0433501 PE=4 SV...	[more]

BLAST of Bhi06G000128 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459514.1	5.2e-18	90.91	PREDICTED: thaumatin-like protein 1b [Cucumis melo]	[more]
XP_004141614.1	8.8e-18	90.91	PREDICTED: thaumatin-like protein 1b [Cucumis sativus] >KGN52611.1 hypothetical ...	[more]
XP_022925800.1	9.8e-17	79.17	thaumatin-like protein 1b [Cucurbita moschata]	[more]
XP_023545182.1	3.7e-16	77.08	thaumatin-like protein 1b [Cucurbita pepo subsp. pepo]	[more]
XP_022143966.1	6.3e-16	81.82	thaumatin-like protein 1b [Momordica charantia]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR037176	Osmotin/thaumatin-like_sf
IPR001938	Thaumatin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
cellular_component	GO:0005576	extracellular region

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi06M000128	Bhi06M000128	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001938	Thaumatin family	PFAM	PF00314	Thaumatin	coord: 2..46 e-value: 9.2E-17 score: 61.4
IPR001938	Thaumatin family	PANTHER	PTHR31048	FAMILY NOT NAMED	coord: 2..45
IPR001938	Thaumatin family	PROSITE	PS51367	THAUMATIN_2	coord: 1..44 score: 11.811
IPR037176	Osmotin/thaumatin-like superfamily	GENE3D	G3DSA:2.60.110.10		coord: 1..50 e-value: 3.4E-17 score: 65.1
IPR037176	Osmotin/thaumatin-like superfamily	SUPERFAMILY	SSF49870	Osmotin, thaumatin-like protein	coord: 2..47
None	No IPR available	PANTHER	PTHR31048:SF10	PATHOGENESIS-RELATED PROTEIN 5-RELATED	coord: 2..45

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi06G000128	Cucumber (Gy14) v1	cgywgoB471
Bhi06G000128	Cucumber (Gy14) v1	cgywgoB474
Bhi06G000128	Cucumber (Gy14) v2	cgybwgoB439
Bhi06G000128	Cucurbita maxima (Rimu)	cmawgoB0009
Bhi06G000128	Cucurbita maxima (Rimu)	cmawgoB0556
Bhi06G000128	Cucurbita moschata (Rifu)	cmowgoB0001
Bhi06G000128	Cucurbita moschata (Rifu)	cmowgoB0553
Bhi06G000128	Cucurbita pepo (Zucchini)	cpewgoB0671
Bhi06G000128	Cucurbita pepo (Zucchini)	cpewgoB0974
Bhi06G000128	Wild cucumber (PI 183967)	cpiwgoB465
Bhi06G000128	Cucumber (Chinese Long) v3	cucwgoB474
Bhi06G000128	Cucumber (Chinese Long) v2	cuwgoB461
Bhi06G000128	Bottle gourd (USVL1VR-Ls)	lsiwgoB590
Bhi06G000128	Bottle gourd (USVL1VR-Ls)	lsiwgoB586
Bhi06G000128	Melon (DHL92) v3.6.1	medwgoB027
Bhi06G000128	Melon (DHL92) v3.5.1	mewgoB029
Bhi06G000128	Watermelon (Charleston Gray)	wcgwgoB608
Bhi06G000128	Watermelon (97103) v2	wgowmbB147
Bhi06G000128	Watermelon (97103) v1	wgowmB124
Bhi06G000128	Silver-seed gourd	carwgoB0212
Bhi06G000128	Silver-seed gourd	carwgoB0793