Bhi06G000081 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi06G000081
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Casein kinase I-like
Location	chr6 : 1901613 .. 1902067 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACCTCGCGTCGACAATAAGTTTCGCCTTGGCCAAAAGATCGGTAGCGGCTCATTCGGGGAGATCTATCTTGGTTCGTCTAGTTTTTCTCCATTCCAGCTTCTCATTATGTTGCTCTATTACAACAATTAGATTTCAATGCTTTAATTCCATCTGTAGGTACTAATATACAGACGAATGAAGAGGTGTGCTCGTGCAATTTTAAGTATGTTTCGAAAAGCCGATAGATCAACCTCAAAGTGGCGTGCTCGTTTGTAGTCACCATTTCGCATTCCCACTGCAAGCCAAGGCTTGCGGGTAGTGCAGATGGGGCCATCCTTCGAAGCATTTCTCTGTTTGAGGCATTCGACAACTTTCTGGACATTTTCTTCATGTTCAATCTGCCGCTGCTTATAGGACTTCCTCTCCGATCGTTTGTCGCCAAGATATTGGATGAAGTAGAAACTGAATGA

mRNA sequence

ATGGAACCTCGCGTCGACAATAAGTTTCGCCTTGGCCAAAAGATCGGTAGCGGCTCATTCGGGGAGATCTATCTTGTCACCATTTCGCATTCCCACTGCAAGCCAAGGCTTGCGGGTAGTGCAGATGGGGCCATCCTTCGAAGCATTTCTCTGTTTGAGGCATTCGACAACTTTCTGGACATTTTCTTCATGTTCAATCTGCCGCTGCTTATAGGACTTCCTCTCCGATCGTTTGTCGCCAAGATATTGGATGAAGTAGAAACTGAATGA

Coding sequence (CDS)

ATGGAACCTCGCGTCGACAATAAGTTTCGCCTTGGCCAAAAGATCGGTAGCGGCTCATTCGGGGAGATCTATCTTGTCACCATTTCGCATTCCCACTGCAAGCCAAGGCTTGCGGGTAGTGCAGATGGGGCCATCCTTCGAAGCATTTCTCTGTTTGAGGCATTCGACAACTTTCTGGACATTTTCTTCATGTTCAATCTGCCGCTGCTTATAGGACTTCCTCTCCGATCGTTTGTCGCCAAGATATTGGATGAAGTAGAAACTGAATGA

Protein sequence

MEPRVDNKFRLGQKIGSGSFGEIYLVTISHSHCKPRLAGSADGAILRSISLFEAFDNFLDIFFMFNLPLLIGLPLRSFVAKILDEVETE

Homology

[Close]

BLAST of Bhi06G000081 vs. Swiss-Prot
Match: sp|P42158|CKL1_ARATH (Casein kinase 1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=CKL1 PE=2 SV=2)

HSP 1 Score: 55.5 bits (132), Expect = 3.6e-07
Identity = 25/32 (78.12%), Postives = 28/32 (87.50%), Query Frame = 0


Query: 1  MEPRVDNKFRLGQKIGSGSFGEIYLVTISHSH 33
          MEPRV NKFRLG+KIGSGSFGEIYL T  H++
Sbjct: 1  MEPRVGNKFRLGRKIGSGSFGEIYLGTNIHTN 32

[Close]

BLAST of Bhi06G000081 vs. Swiss-Prot
Match: sp|Q9ZUP4|CKL5_ARATH (Casein kinase 1-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=CKL5 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 1.8e-06
Identity = 24/27 (88.89%), Postives = 25/27 (92.59%), Query Frame = 0


Query: 1  MEPRVDNKFRLGQKIGSGSFGEIYLVT 28
          MEPRV NKFRLG+KIGSGSFGEIYL T
Sbjct: 1  MEPRVGNKFRLGRKIGSGSFGEIYLGT 27

[Close]

BLAST of Bhi06G000081 vs. Swiss-Prot
Match: sp|Q8VYK9|CKL12_ARATH (Casein kinase 1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=CKL12 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 4.0e-06
Identity = 23/27 (85.19%), Postives = 25/27 (92.59%), Query Frame = 0


Query: 1  MEPRVDNKFRLGQKIGSGSFGEIYLVT 28
          MEPRV NK+RLG+KIGSGSFGEIYL T
Sbjct: 1  MEPRVGNKYRLGRKIGSGSFGEIYLGT 27

[Close]

BLAST of Bhi06G000081 vs. Swiss-Prot
Match: sp|Q9CAI5|CKL2_ARATH (Casein kinase 1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=CKL2 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 5.2e-06
Identity = 23/27 (85.19%), Postives = 24/27 (88.89%), Query Frame = 0


Query: 1  MEPRVDNKFRLGQKIGSGSFGEIYLVT 28
          MEPRV NKFRLG+KIG GSFGEIYL T
Sbjct: 1  MEPRVGNKFRLGRKIGGGSFGEIYLGT 27

[Close]

BLAST of Bhi06G000081 vs. Swiss-Prot
Match: sp|O76324|DCO_DROME (Discs overgrown protein kinase OS=Drosophila melanogaster OX=7227 GN=dco PE=1 SV=2)

HSP 1 Score: 47.0 bits (110), Expect = 1.3e-04
Identity = 21/27 (77.78%), Postives = 24/27 (88.89%), Query Frame = 0


Query: 1  MEPRVDNKFRLGQKIGSGSFGEIYLVT 28
          ME RV NK+RLG+KIGSGSFG+IYL T
Sbjct: 1  MELRVGNKYRLGRKIGSGSFGDIYLGT 27

[Close]

BLAST of Bhi06G000081 vs. TAIR10
Match: AT4G26100.1 (casein kinase 1)

HSP 1 Score: 55.5 bits (132), Expect = 2.0e-08
Identity = 25/32 (78.12%), Postives = 28/32 (87.50%), Query Frame = 0


Query: 1  MEPRVDNKFRLGQKIGSGSFGEIYLVTISHSH 33
          MEPRV NKFRLG+KIGSGSFGEIYL T  H++
Sbjct: 1  MEPRVGNKFRLGRKIGSGSFGEIYLGTNIHTN 32

[Close]

BLAST of Bhi06G000081 vs. TAIR10
Match: AT2G19470.1 (casein kinase I-like 5)

HSP 1 Score: 53.1 bits (126), Expect = 9.9e-08
Identity = 24/27 (88.89%), Postives = 25/27 (92.59%), Query Frame = 0


Query: 1  MEPRVDNKFRLGQKIGSGSFGEIYLVT 28
          MEPRV NKFRLG+KIGSGSFGEIYL T
Sbjct: 1  MEPRVGNKFRLGRKIGSGSFGEIYLGT 27

[Close]

BLAST of Bhi06G000081 vs. TAIR10
Match: AT5G57015.1 (casein kinase I-like 12)

HSP 1 Score: 52.0 bits (123), Expect = 2.2e-07
Identity = 23/27 (85.19%), Postives = 25/27 (92.59%), Query Frame = 0


Query: 1  MEPRVDNKFRLGQKIGSGSFGEIYLVT 28
          MEPRV NK+RLG+KIGSGSFGEIYL T
Sbjct: 1  MEPRVGNKYRLGRKIGSGSFGEIYLGT 27

[Close]

BLAST of Bhi06G000081 vs. TAIR10
Match: AT1G72710.1 (casein kinase 1-like protein 2)

HSP 1 Score: 51.6 bits (122), Expect = 2.9e-07
Identity = 23/27 (85.19%), Postives = 24/27 (88.89%), Query Frame = 0


Query: 1  MEPRVDNKFRLGQKIGSGSFGEIYLVT 28
          MEPRV NKFRLG+KIG GSFGEIYL T
Sbjct: 1  MEPRVGNKFRLGRKIGGGSFGEIYLGT 27

[Close]

BLAST of Bhi06G000081 vs. TAIR10
Match: AT4G08800.1 (Protein kinase superfamily protein)

HSP 1 Score: 47.8 bits (112), Expect = 4.2e-06
Identity = 21/27 (77.78%), Postives = 24/27 (88.89%), Query Frame = 0


Query: 1  MEPRVDNKFRLGQKIGSGSFGEIYLVT 28
          ME R+ NKFRLG+KIGSG+FGEIYL T
Sbjct: 1  MELRIGNKFRLGRKIGSGAFGEIYLGT 27

[Close]

BLAST of Bhi06G000081 vs. TrEMBL
Match: tr|A0A166ASX7|A0A166ASX7_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_010508 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 5.6e-05
Identity = 25/31 (80.65%), Postives = 28/31 (90.32%), Query Frame = 0


Query: 1  MEPRVDNKFRLGQKIGSGSFGEIYLVTISHS 32
          MEPRV NKFRLG+KIGSGSFGEIYL TI+ +
Sbjct: 1  MEPRVGNKFRLGRKIGSGSFGEIYLGTINQT 31

[Close]

BLAST of Bhi06G000081 vs. TrEMBL
Match: tr|A0A1J3F2B4|A0A1J3F2B4_NOCCA (Casein kinase I isoform delta-like OS=Noccaea caerulescens OX=107243 GN=GA_TR6541_c0_g1_i1_g.22025 PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 7.3e-05
Identity = 25/32 (78.12%), Postives = 28/32 (87.50%), Query Frame = 0


Query: 1  MEPRVDNKFRLGQKIGSGSFGEIYLVTISHSH 33
          MEPRV NKFRLG+KIGSGSFGEIYL T  H++
Sbjct: 3  MEPRVGNKFRLGRKIGSGSFGEIYLGTHIHTN 34

[Close]

BLAST of Bhi06G000081 vs. TrEMBL
Match: tr|A0A178UYM7|A0A178UYM7_ARATH (CKL1 OS=Arabidopsis thaliana OX=3702 GN=AXX17_At4g30100 PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 7.3e-05
Identity = 25/32 (78.12%), Postives = 28/32 (87.50%), Query Frame = 0


Query: 1  MEPRVDNKFRLGQKIGSGSFGEIYLVTISHSH 33
          MEPRV NKFRLG+KIGSGSFGEIYL T  H++
Sbjct: 1  MEPRVGNKFRLGRKIGSGSFGEIYLGTNIHTN 32

[Close]

BLAST of Bhi06G000081 vs. TrEMBL
Match: tr|A0A1J3JFP0|A0A1J3JFP0_NOCCA (Casein kinase I isoform delta-like OS=Noccaea caerulescens OX=107243 GN=MP_TR23567_c0_g1_i1_g.68669 PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 7.3e-05
Identity = 25/32 (78.12%), Postives = 28/32 (87.50%), Query Frame = 0


Query: 1  MEPRVDNKFRLGQKIGSGSFGEIYLVTISHSH 33
          MEPRV NKFRLG+KIGSGSFGEIYL T  H++
Sbjct: 3  MEPRVGNKFRLGRKIGSGSFGEIYLGTHIHTN 34

[Close]

BLAST of Bhi06G000081 vs. TrEMBL
Match: tr|A0A0K9P677|A0A0K9P677_ZOSMR (Casein kinase I-like OS=Zostera marina OX=29655 GN=ZOSMA_3G02020 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 7.3e-05
Identity = 25/32 (78.12%), Postives = 28/32 (87.50%), Query Frame = 0


Query: 1  MEPRVDNKFRLGQKIGSGSFGEIYLVTISHSH 33
          MEPRV NKFRLG+KIGSGSFGEIYL T  H++
Sbjct: 1  MEPRVGNKFRLGRKIGSGSFGEIYLGTNVHTN 32

[Close]

BLAST of Bhi06G000081 vs. NCBI nr
Match: KZN01754.1 (hypothetical protein DCAR_010508 [Daucus carota subsp. sativus])

HSP 1 Score: 55.8 bits (133), Expect = 8.5e-05
Identity = 25/31 (80.65%), Postives = 28/31 (90.32%), Query Frame = 0


Query: 1  MEPRVDNKFRLGQKIGSGSFGEIYLVTISHS 32
          MEPRV NKFRLG+KIGSGSFGEIYL TI+ +
Sbjct: 1  MEPRVGNKFRLGRKIGSGSFGEIYLGTINQT 31

[Close]

BLAST of Bhi06G000081 vs. NCBI nr
Match: XP_017238524.1 (PREDICTED: casein kinase I isoform X1 [Daucus carota subsp. sativus])

HSP 1 Score: 55.8 bits (133), Expect = 8.5e-05
Identity = 25/31 (80.65%), Postives = 28/31 (90.32%), Query Frame = 0


Query: 1  MEPRVDNKFRLGQKIGSGSFGEIYLVTISHS 32
          MEPRV NKFRLG+KIGSGSFGEIYL TI+ +
Sbjct: 1  MEPRVGNKFRLGRKIGSGSFGEIYLGTINQT 31

[Close]

BLAST of Bhi06G000081 vs. NCBI nr
Match: XP_017238525.1 (PREDICTED: casein kinase I isoform X2 [Daucus carota subsp. sativus])

HSP 1 Score: 55.8 bits (133), Expect = 8.5e-05
Identity = 25/31 (80.65%), Postives = 28/31 (90.32%), Query Frame = 0


Query: 1  MEPRVDNKFRLGQKIGSGSFGEIYLVTISHS 32
          MEPRV NKFRLG+KIGSGSFGEIYL TI+ +
Sbjct: 1  MEPRVGNKFRLGRKIGSGSFGEIYLGTINQT 31

[Close]

BLAST of Bhi06G000081 vs. NCBI nr
Match: XP_020873470.1 (casein kinase 1-like protein 1 [Arabidopsis lyrata subsp. lyrata] >EFH43839.1 hypothetical protein ARALYDRAFT_492204 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 55.5 bits (132), Expect = 1.1e-04
Identity = 25/32 (78.12%), Postives = 28/32 (87.50%), Query Frame = 0


Query: 1  MEPRVDNKFRLGQKIGSGSFGEIYLVTISHSH 33
          MEPRV NKFRLG+KIGSGSFGEIYL T  H++
Sbjct: 1  MEPRVGNKFRLGRKIGSGSFGEIYLGTNIHTN 32

[Close]

BLAST of Bhi06G000081 vs. NCBI nr
Match: XP_010433551.1 (PREDICTED: casein kinase 1-like protein 1 [Camelina sativa])

HSP 1 Score: 55.5 bits (132), Expect = 1.1e-04
Identity = 25/32 (78.12%), Postives = 28/32 (87.50%), Query Frame = 0


Query: 1  MEPRVDNKFRLGQKIGSGSFGEIYLVTISHSH 33
          MEPRV NKFRLG+KIGSGSFGEIYL T  H++
Sbjct: 1  MEPRVGNKFRLGRKIGSGSFGEIYLGTNIHTN 32

The following BLAST results are available for this feature:

BLAST of Bhi06G000081 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P42158\|CKL1_ARATH	3.6e-07	78.13	Casein kinase 1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=CKL1 PE=2 SV=2	[more]
sp\|Q9ZUP4\|CKL5_ARATH	1.8e-06	88.89	Casein kinase 1-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=CKL5 PE=1 SV=1	[more]
sp\|Q8VYK9\|CKL12_ARATH	4.0e-06	85.19	Casein kinase 1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=CKL12 PE=2 SV...	[more]
sp\|Q9CAI5\|CKL2_ARATH	5.2e-06	85.19	Casein kinase 1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=CKL2 PE=1 SV=1	[more]
sp\|O76324\|DCO_DROME	1.3e-04	77.78	Discs overgrown protein kinase OS=Drosophila melanogaster OX=7227 GN=dco PE=1 SV...	[more]

BLAST of Bhi06G000081 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G26100.1	2.0e-08	78.13	casein kinase 1	[more]
AT2G19470.1	9.9e-08	88.89	casein kinase I-like 5	[more]
AT5G57015.1	2.2e-07	85.19	casein kinase I-like 12	[more]
AT1G72710.1	2.9e-07	85.19	casein kinase 1-like protein 2	[more]
AT4G08800.1	4.2e-06	77.78	Protein kinase superfamily protein	[more]

BLAST of Bhi06G000081 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A166ASX7\|A0A166ASX7_DAUCA	5.6e-05	80.65	Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_010508 ...	[more]
tr\|A0A1J3F2B4\|A0A1J3F2B4_NOCCA	7.3e-05	78.13	Casein kinase I isoform delta-like OS=Noccaea caerulescens OX=107243 GN=GA_TR654...	[more]
tr\|A0A178UYM7\|A0A178UYM7_ARATH	7.3e-05	78.13	CKL1 OS=Arabidopsis thaliana OX=3702 GN=AXX17_At4g30100 PE=3 SV=1	[more]
tr\|A0A1J3JFP0\|A0A1J3JFP0_NOCCA	7.3e-05	78.13	Casein kinase I isoform delta-like OS=Noccaea caerulescens OX=107243 GN=MP_TR235...	[more]
tr\|A0A0K9P677\|A0A0K9P677_ZOSMR	7.3e-05	78.13	Casein kinase I-like OS=Zostera marina OX=29655 GN=ZOSMA_3G02020 PE=4 SV=1	[more]

BLAST of Bhi06G000081 vs. NCBI nr


Match Name	E-value	Identity	Description
KZN01754.1	8.5e-05	80.65	hypothetical protein DCAR_010508 [Daucus carota subsp. sativus]	[more]
XP_017238524.1	8.5e-05	80.65	PREDICTED: casein kinase I isoform X1 [Daucus carota subsp. sativus]	[more]
XP_017238525.1	8.5e-05	80.65	PREDICTED: casein kinase I isoform X2 [Daucus carota subsp. sativus]	[more]
XP_020873470.1	1.1e-04	78.13	casein kinase 1-like protein 1 [Arabidopsis lyrata subsp. lyrata] >EFH43839.1 hy...	[more]
XP_010433551.1	1.1e-04	78.13	PREDICTED: casein kinase 1-like protein 1 [Camelina sativa]	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi06M000081	Bhi06M000081	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.30.200.20		coord: 2..36 e-value: 5.5E-6 score: 28.7

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi06G000081	Cucumber (Gy14) v1	cgywgoB471
Bhi06G000081	Cucumber (Gy14) v2	cgybwgoB439
Bhi06G000081	Cucurbita maxima (Rimu)	cmawgoB0384
Bhi06G000081	Cucurbita maxima (Rimu)	cmawgoB0837
Bhi06G000081	Cucurbita moschata (Rifu)	cmowgoB0377
Bhi06G000081	Cucurbita moschata (Rifu)	cmowgoB0834
Bhi06G000081	Cucurbita pepo (Zucchini)	cpewgoB0236
Bhi06G000081	Cucurbita pepo (Zucchini)	cpewgoB0501
Bhi06G000081	Wild cucumber (PI 183967)	cpiwgoB465
Bhi06G000081	Cucumber (Chinese Long) v3	cucwgoB474
Bhi06G000081	Cucumber (Chinese Long) v2	cuwgoB461
Bhi06G000081	Bottle gourd (USVL1VR-Ls)	lsiwgoB310
Bhi06G000081	Melon (DHL92) v3.6.1	medwgoB023
Bhi06G000081	Melon (DHL92) v3.6.1	medwgoB027
Bhi06G000081	Melon (DHL92) v3.5.1	mewgoB025
Bhi06G000081	Melon (DHL92) v3.5.1	mewgoB029
Bhi06G000081	Watermelon (Charleston Gray)	wcgwgoB145
Bhi06G000081	Watermelon (97103) v2	wgowmbB118
Bhi06G000081	Watermelon (97103) v1	wgowmB146
Bhi06G000081	Silver-seed gourd	carwgoB0019
Bhi06G000081	Silver-seed gourd	carwgoB0342