Bhi05G001703 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi05G001703
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Unknown protein
Location	chr5 : 60904862 .. 60905155 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACGTGGCAGACCACGCAAGCAACCAATAGGGACTCCAGATGTTACCCCCGAAAGAGACCAAGGCGAATCAAGCCATCCACAGCCAGAGGCTAGAGCTGACGAGCAAATGATGGGAAGATTTGCTCGGTGCCTAGCCGAAAACCTAGGAAGGGTTACAGTAGACCCCGAAAAGCGGTTTAGTATTGAAAGGTTGAAAGACTTAGAAGCCTCAACTTTTGAAGGAACCACGAACCCAGCTGATGCTGAAGCTTGGTTCGTGATGGTAGAGAAATGCTTCAGGGTAATGTAA

mRNA sequence

ATGGCACGTGGCAGACCACGCAAGCAACCAATAGGGACTCCAGATGTTACCCCCGAAAGAGACCAAGGCGAATCAAGCCATCCACAGCCAGAGGCTAGAGCTGACGAGCAAATGATGGGAAGATTTGCTCGGTGCCTAGCCGAAAACCTAGGAAGGGTTACAGTAGACCCCGAAAAGCGGTTTAGTATTGAAAGGTTGAAAGACTTAGAAGCCTCAACTTTTGAAGGAACCACGAACCCAGCTGATGCTGAAGCTTGGTTCGTGATGGTAGAGAAATGCTTCAGGGTAATGTAA

Coding sequence (CDS)

ATGGCACGTGGCAGACCACGCAAGCAACCAATAGGGACTCCAGATGTTACCCCCGAAAGAGACCAAGGCGAATCAAGCCATCCACAGCCAGAGGCTAGAGCTGACGAGCAAATGATGGGAAGATTTGCTCGGTGCCTAGCCGAAAACCTAGGAAGGGTTACAGTAGACCCCGAAAAGCGGTTTAGTATTGAAAGGTTGAAAGACTTAGAAGCCTCAACTTTTGAAGGAACCACGAACCCAGCTGATGCTGAAGCTTGGTTCGTGATGGTAGAGAAATGCTTCAGGGTAATGTAA

Protein sequence

MARGRPRKQPIGTPDVTPERDQGESSHPQPEARADEQMMGRFARCLAENLGRVTVDPEKRFSIERLKDLEASTFEGTTNPADAEAWFVMVEKCFRVM

Homology

[Close]

BLAST of Bhi05G001703 vs. TrEMBL
Match: tr|A0A1S4E0X6|A0A1S4E0X6_CUCME (uncharacterized protein LOC107991320 OS=Cucumis melo OX=3656 GN=LOC107991320 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.0e-08
Identity = 38/93 (40.86%), Postives = 53/93 (56.99%), Query Frame = 0


Query: 5   RPRKQPIGTPDVTPERDQGESSHPQPEARADEQMMGRFARCLAENLGRVTVDPEKRFSIE 64
           R R+   GT D T  + +  SS P+ +  A  +   R A+ +         DPEK + IE
Sbjct: 8   RHRQNQDGTQDPTQGQSERGSSTPRGQNEAGSERFSRSAQEIGRPEKAGPSDPEKMYGIE 67

Query: 65  RLKDLEASTFEGTTNPADAEAWFVMVEKCFRVM 98
           RLK LEA+ F+G+T+ ADAE W  M+EKCF +M
Sbjct: 68  RLKKLEATVFDGSTDLADAEVWLNMLEKCFDLM 100

[Close]

BLAST of Bhi05G001703 vs. TrEMBL
Match: tr|A0A1S3BJ07|A0A1S3BJ07_CUCME (uncharacterized protein LOC103490604 OS=Cucumis melo OX=3656 GN=LOC103490604 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 5.9e-08
Identity = 41/89 (46.07%), Postives = 54/89 (60.67%), Query Frame = 0


Query: 13  TPDVTPERDQGESSHPQPEARADEQMMGRFARCLAENLGRV----TVDPEKRFSIERLKD 72
           T D T  + +  SS P+ +  A  +   RFAR  A+ +GR       DPEK + IERLK 
Sbjct: 16  TQDPTQGQSERGSSTPRGQNEAGSE---RFARS-AQEIGRPERVGPSDPEKMYGIERLKK 75

Query: 73  LEASTFEGTTNPADAEAWFVMVEKCFRVM 98
           L A+ FEG+T+PA+AE W  M+EKCF VM
Sbjct: 76  LGATVFEGSTDPANAEVWLNMLEKCFDVM 100

[Close]

BLAST of Bhi05G001703 vs. TrEMBL
Match: tr|A0A1S4DWJ7|A0A1S4DWJ7_CUCME (uncharacterized protein LOC107990863 OS=Cucumis melo OX=3656 GN=LOC107990863 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.6e-05
Identity = 33/81 (40.74%), Postives = 43/81 (53.09%), Query Frame = 0


Query: 17 TPERDQGESSHPQPEARADEQMMGRFARCLAENLGRVTVDPEKRFSIERLKDLEASTFEG 76
          T  +  GESS P+ +     +   R  + +         D EK + IERLK L A  FEG
Sbjct: 5  TQGQSVGESSTPRVQVGVGNERFTRTTQEIGRPERAEPSDLEKAYGIERLKKLGAIVFEG 64

Query: 77 TTNPADAEAWFVMVEKCFRVM 98
          + +PADAE W  M+EKCF VM
Sbjct: 65 SIDPADAEEWCNMLEKCFNVM 85

[Close]

BLAST of Bhi05G001703 vs. TrEMBL
Match: tr|A0A1S4DV40|A0A1S4DV40_CUCME (uncharacterized protein LOC103487680 OS=Cucumis melo OX=3656 GN=LOC103487680 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 4.7e-05
Identity = 33/93 (35.48%), Postives = 50/93 (53.76%), Query Frame = 0


Query: 5   RPRKQPIGTPDVTPERDQGESSHPQPEARADEQMMGRFARCLAENLGRVTVDPEKRFSIE 64
           R R+   G    T  + +  SS P+ +     +   R A+ ++        D +K + IE
Sbjct: 8   RRRQNQDGMQYPTQGQSERGSSTPRGQNEVGSERFARSAQEISRPERARPSDLDKMYGIE 67

Query: 65  RLKDLEASTFEGTTNPADAEAWFVMVEKCFRVM 98
           +LK L A+ F+G+T+PADAE W  M+EKCF VM
Sbjct: 68  QLKKLGATVFQGSTDPADAEVWLNMLEKCFDVM 100

[Close]

BLAST of Bhi05G001703 vs. TrEMBL
Match: tr|A0A1S4DXX0|A0A1S4DXX0_CUCME (uncharacterized protein LOC107991043 OS=Cucumis melo OX=3656 GN=LOC107991043 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 6.1e-05
Identity = 35/93 (37.63%), Postives = 45/93 (48.39%), Query Frame = 0


Query: 5   RPRKQPIGTPDVTPERDQGESSHPQPEARADEQMMGRFARCLAENLGRVTVDPEKRFSIE 64
           R R+   G    T     GESS  +    A  +      + +         DPEK + IE
Sbjct: 13  RRRQNQDGMQGPTQGPSVGESSTLEVRGGAGNEQFAGTTQEIERPDRAEPSDPEKAYGIE 72

Query: 65  RLKDLEASTFEGTTNPADAEAWFVMVEKCFRVM 98
           RLK L A+ FEG+ +PAD E W  M+EKCF VM
Sbjct: 73  RLKKLGATVFEGSIDPADVENWLNMLEKCFDVM 105

[Close]

BLAST of Bhi05G001703 vs. NCBI nr
Match: XP_016901625.1 (PREDICTED: uncharacterized protein LOC107991320 [Cucumis melo])

HSP 1 Score: 67.4 bits (163), Expect = 3.1e-08
Identity = 38/93 (40.86%), Postives = 53/93 (56.99%), Query Frame = 0


Query: 5   RPRKQPIGTPDVTPERDQGESSHPQPEARADEQMMGRFARCLAENLGRVTVDPEKRFSIE 64
           R R+   GT D T  + +  SS P+ +  A  +   R A+ +         DPEK + IE
Sbjct: 8   RHRQNQDGTQDPTQGQSERGSSTPRGQNEAGSERFSRSAQEIGRPEKAGPSDPEKMYGIE 67

Query: 65  RLKDLEASTFEGTTNPADAEAWFVMVEKCFRVM 98
           RLK LEA+ F+G+T+ ADAE W  M+EKCF +M
Sbjct: 68  RLKKLEATVFDGSTDLADAEVWLNMLEKCFDLM 100

[Close]

BLAST of Bhi05G001703 vs. NCBI nr
Match: XP_008448403.1 (PREDICTED: uncharacterized protein LOC103490604 [Cucumis melo])

HSP 1 Score: 65.9 bits (159), Expect = 8.9e-08
Identity = 41/89 (46.07%), Postives = 54/89 (60.67%), Query Frame = 0


Query: 13  TPDVTPERDQGESSHPQPEARADEQMMGRFARCLAENLGRV----TVDPEKRFSIERLKD 72
           T D T  + +  SS P+ +  A  +   RFAR  A+ +GR       DPEK + IERLK 
Sbjct: 16  TQDPTQGQSERGSSTPRGQNEAGSE---RFARS-AQEIGRPERVGPSDPEKMYGIERLKK 75

Query: 73  LEASTFEGTTNPADAEAWFVMVEKCFRVM 98
           L A+ FEG+T+PA+AE W  M+EKCF VM
Sbjct: 76  LGATVFEGSTDPANAEVWLNMLEKCFDVM 100

[Close]

BLAST of Bhi05G001703 vs. NCBI nr
Match: XP_016900338.1 (PREDICTED: uncharacterized protein LOC107990863 [Cucumis melo])

HSP 1 Score: 57.8 bits (138), Expect = 2.4e-05
Identity = 33/81 (40.74%), Postives = 43/81 (53.09%), Query Frame = 0


Query: 17 TPERDQGESSHPQPEARADEQMMGRFARCLAENLGRVTVDPEKRFSIERLKDLEASTFEG 76
          T  +  GESS P+ +     +   R  + +         D EK + IERLK L A  FEG
Sbjct: 5  TQGQSVGESSTPRVQVGVGNERFTRTTQEIGRPERAEPSDLEKAYGIERLKKLGAIVFEG 64

Query: 77 TTNPADAEAWFVMVEKCFRVM 98
          + +PADAE W  M+EKCF VM
Sbjct: 65 SIDPADAEEWCNMLEKCFNVM 85

[Close]

BLAST of Bhi05G001703 vs. NCBI nr
Match: XP_016899851.1 (PREDICTED: uncharacterized protein LOC103487680 [Cucumis melo])

HSP 1 Score: 56.2 bits (134), Expect = 7.1e-05
Identity = 33/93 (35.48%), Postives = 50/93 (53.76%), Query Frame = 0


Query: 5   RPRKQPIGTPDVTPERDQGESSHPQPEARADEQMMGRFARCLAENLGRVTVDPEKRFSIE 64
           R R+   G    T  + +  SS P+ +     +   R A+ ++        D +K + IE
Sbjct: 8   RRRQNQDGMQYPTQGQSERGSSTPRGQNEVGSERFARSAQEISRPERARPSDLDKMYGIE 67

Query: 65  RLKDLEASTFEGTTNPADAEAWFVMVEKCFRVM 98
           +LK L A+ F+G+T+PADAE W  M+EKCF VM
Sbjct: 68  QLKKLGATVFQGSTDPADAEVWLNMLEKCFDVM 100

[Close]

BLAST of Bhi05G001703 vs. NCBI nr
Match: XP_016900827.1 (PREDICTED: uncharacterized protein LOC107991043 [Cucumis melo])

HSP 1 Score: 55.8 bits (133), Expect = 9.2e-05
Identity = 35/93 (37.63%), Postives = 45/93 (48.39%), Query Frame = 0


Query: 5   RPRKQPIGTPDVTPERDQGESSHPQPEARADEQMMGRFARCLAENLGRVTVDPEKRFSIE 64
           R R+   G    T     GESS  +    A  +      + +         DPEK + IE
Sbjct: 13  RRRQNQDGMQGPTQGPSVGESSTLEVRGGAGNEQFAGTTQEIERPDRAEPSDPEKAYGIE 72

Query: 65  RLKDLEASTFEGTTNPADAEAWFVMVEKCFRVM 98
           RLK L A+ FEG+ +PAD E W  M+EKCF VM
Sbjct: 73  RLKKLGATVFEGSIDPADVENWLNMLEKCFDVM 105

The following BLAST results are available for this feature:

BLAST of Bhi05G001703 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi05G001703 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi05G001703 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4E0X6\|A0A1S4E0X6_CUCME	2.0e-08	40.86	uncharacterized protein LOC107991320 OS=Cucumis melo OX=3656 GN=LOC107991320 PE=...	[more]
tr\|A0A1S3BJ07\|A0A1S3BJ07_CUCME	5.9e-08	46.07	uncharacterized protein LOC103490604 OS=Cucumis melo OX=3656 GN=LOC103490604 PE=...	[more]
tr\|A0A1S4DWJ7\|A0A1S4DWJ7_CUCME	1.6e-05	40.74	uncharacterized protein LOC107990863 OS=Cucumis melo OX=3656 GN=LOC107990863 PE=...	[more]
tr\|A0A1S4DV40\|A0A1S4DV40_CUCME	4.7e-05	35.48	uncharacterized protein LOC103487680 OS=Cucumis melo OX=3656 GN=LOC103487680 PE=...	[more]
tr\|A0A1S4DXX0\|A0A1S4DXX0_CUCME	6.1e-05	37.63	uncharacterized protein LOC107991043 OS=Cucumis melo OX=3656 GN=LOC107991043 PE=...	[more]

BLAST of Bhi05G001703 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016901625.1	3.1e-08	40.86	PREDICTED: uncharacterized protein LOC107991320 [Cucumis melo]	[more]
XP_008448403.1	8.9e-08	46.07	PREDICTED: uncharacterized protein LOC103490604 [Cucumis melo]	[more]
XP_016900338.1	2.4e-05	40.74	PREDICTED: uncharacterized protein LOC107990863 [Cucumis melo]	[more]
XP_016899851.1	7.1e-05	35.48	PREDICTED: uncharacterized protein LOC103487680 [Cucumis melo]	[more]
XP_016900827.1	9.2e-05	37.63	PREDICTED: uncharacterized protein LOC107991043 [Cucumis melo]	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi05M001703	Bhi05M001703	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi05G001703	Watermelon (Charleston Gray)	wcgwgoB042
Bhi05G001703	Watermelon (97103) v2	wgowmbB271
Bhi05G001703	Watermelon (97103) v1	wgowmB251
Bhi05G001703	Silver-seed gourd	carwgoB0641
Bhi05G001703	Cucumber (Gy14) v2	cgybwgoB642
Bhi05G001703	Cucurbita maxima (Rimu)	cmawgoB0654
Bhi05G001703	Cucurbita moschata (Rifu)	cmowgoB0655
Bhi05G001703	Cucurbita pepo (Zucchini)	cpewgoB0328
Bhi05G001703	Wild cucumber (PI 183967)	cpiwgoB682
Bhi05G001703	Cucumber (Chinese Long) v3	cucwgoB696
Bhi05G001703	Cucumber (Chinese Long) v2	cuwgoB671
Bhi05G001703	Bottle gourd (USVL1VR-Ls)	lsiwgoB114
Bhi05G001703	Melon (DHL92) v3.6.1	medwgoB214
Bhi05G001703	Melon (DHL92) v3.5.1	mewgoB214