Bhi05G001573 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi05G001573
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Wound-responsive family protein
Location	chr5 : 57528421 .. 57529200 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAGATTTTGTCACGCAGCGGTTTAGTCTCCAAATTAAAAACCATGTGCCCAACTCTACCCCTCCCATCTCTTGCCCTGATACGTGGACCTCAAGGGCATTTATGTCCATTTTGACCACTGAAAACAAAGAAAACCAGGGGCTTTTTCCCCTGTTTAATCTGATCTAATTTGTGTGTGTGTATATATATAATCACCAAATCCCAATTCATTTTCAAGCATTCAGAATATTGAAGACGCAAGAGAAAAAAATTGAAGTGAGAGAGCGCAAAAATGAGTTGTTCGAGAAGAGCTTGGGTTGTAGCAGCCAGTGTTGGAGTGGTGGAGGCCTTGAAAGATCAAGGGATTTGCCGGTGGAATCATACCATTAGATCGCTTCAACAGTACGCTAAAAACCATGTTAGATCGGTTTCTCAGGCTAGGAAGCTTTCTTCTCCGTCGGCTACGGCGGTTTCCGATCAGAAGTGGAAGCAATCGGAGGAATCTTTGAGAACTGTCATGTACTTGAGCTGTTGGGGGCCCAATAACTGACCCACATCAGTTGTTTTTTGACGCAGATCATAGTTCTTATCACATATGTATTTGTACAAACCAAAACCAACTCATATCAATGGAAGAGTTTTTATCACATTTCTTTTCTGGTTCTCTTAAAGTTAGAATTTTAATTAGTTTTTTTTCTCCTTTTCTTTTTTTTAGTTTAATGAAATAAGTTATCTTGAGAGATTTGGAAATCTTGGAAGATTGATCAATCTTAATCAATTTTTGGAGATTATACATCACA

mRNA sequence

AAGAGATTTTGTCACGCAGCGGTTTAGTCTCCAAATTAAAAACCATGTGCCCAACTCTACCCCTCCCATCTCTTGCCCTGATACGTGGACCTCAAGGGCATTTATGTCCATTTTGACCACTGAAAACAAAGAAAACCAGGGGCTTTTTCCCCTGTTTAATCTGATCTAATTTGTGTGTGTGTATATATATAATCACCAAATCCCAATTCATTTTCAAGCATTCAGAATATTGAAGACGCAAGAGAAAAAAATTGAAGTGAGAGAGCGCAAAAATGAGTTGTTCGAGAAGAGCTTGGGTTGTAGCAGCCAGTGTTGGAGTGGTGGAGGCCTTGAAAGATCAAGGGATTTGCCGGTGGAATCATACCATTAGATCGCTTCAACAGTACGCTAAAAACCATGTTAGATCGGTTTCTCAGGCTAGGAAGCTTTCTTCTCCGTCGGCTACGGCGGTTTCCGATCAGAAGTGGAAGCAATCGGAGGAATCTTTGAGAACTGTCATGTACTTGAGCTGTTGGGGGCCCAATAACTGACCCACATCAGTTGTTTTTTGACGCAGATCATAGTTCTTATCACATATGTATTTGTACAAACCAAAACCAACTCATATCAATGGAAGAGTTTTTATCACATTTCTTTTCTGGTTCTCTTAAAGTTAGAATTTTAATTAGTTTTTTTTCTCCTTTTCTTTTTTTTAGTTTAATGAAATAAGTTATCTTGAGAGATTTGGAAATCTTGGAAGATTGATCAATCTTAATCAATTTTTGGAGATTATACATCACA

Coding sequence (CDS)

ATGAGTTGTTCGAGAAGAGCTTGGGTTGTAGCAGCCAGTGTTGGAGTGGTGGAGGCCTTGAAAGATCAAGGGATTTGCCGGTGGAATCATACCATTAGATCGCTTCAACAGTACGCTAAAAACCATGTTAGATCGGTTTCTCAGGCTAGGAAGCTTTCTTCTCCGTCGGCTACGGCGGTTTCCGATCAGAAGTGGAAGCAATCGGAGGAATCTTTGAGAACTGTCATGTACTTGAGCTGTTGGGGGCCCAATAACTGA

Protein sequence

MSCSRRAWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSVSQARKLSSPSATAVSDQKWKQSEESLRTVMYLSCWGPNN

Homology

[Close]

BLAST of Bhi05G001573 vs. TAIR10
Match: AT4G10265.1 (Wound-responsive family protein)

HSP 1 Score: 109.0 bits (271), Expect = 1.5e-24
Identity = 55/85 (64.71%), Postives = 68/85 (80.00%), Query Frame = 0


Query: 1  MSCSRRAWVVAASVGVVEALKDQ-GICRWNHTIRSLQQYAKNHVRSVSQARKLSSPSATA 60
          MS + + W+VAAS+G VEALKDQ G+CRWN+ IRS  QY +N++RSVSQA+KLSS S   
Sbjct: 1  MSSASKTWMVAASIGAVEALKDQLGVCRWNYVIRSANQYLRNNLRSVSQAKKLSSSSIDY 60

Query: 61 VSDQKWKQSEESLRTVMYLSCWGPN 85
           +  K KQ+EESLRTVMYLSCWGP+
Sbjct: 61 TN--KTKQAEESLRTVMYLSCWGPS 83

[Close]

BLAST of Bhi05G001573 vs. TAIR10
Match: AT4G10270.1 (Wound-responsive family protein)

HSP 1 Score: 105.1 bits (261), Expect = 2.1e-23
Identity = 52/90 (57.78%), Postives = 68/90 (75.56%), Query Frame = 0


Query: 1  MSCSRRAWVVAASVGVVEALKDQ-GICRWNHTIRSLQQYAKNHVRSVSQARKLSSPSATA 60
          MS + +AW VA S+G VEALKDQ G+CRWN+ +RS+ Q+ +N+VRSVSQ ++ SS S +A
Sbjct: 1  MSSTSKAWTVAVSIGAVEALKDQLGLCRWNYILRSVNQHLRNNVRSVSQGKRFSSSSVSA 60

Query: 61 V-----SDQKWKQSEESLRTVMYLSCWGPN 85
                  +K K++EESLRTVMYLSCWGPN
Sbjct: 61 AVTSSGESEKAKKAEESLRTVMYLSCWGPN 90

[Close]

BLAST of Bhi05G001573 vs. TAIR10
Match: AT4G33560.1 (Wound-responsive family protein)

HSP 1 Score: 55.5 bits (132), Expect = 1.9e-08
Identity = 31/83 (37.35%), Postives = 46/83 (55.42%), Query Frame = 0


Query: 7  AWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSVSQARKLSSP----SATAVSD 66
          +W VA ++  VE LKDQG+ RWN+  R L + A   VR+++   + S P    SAT++  
Sbjct: 8  SWAVATAIAAVEVLKDQGVARWNYLFRLLHKEAMARVRTITVPSRPSPPTSSSSATSIRS 67

Query: 67 QKWKQS--EESLRTVMYLSCWGP 84
          +    +  E S    M LSC+GP
Sbjct: 68 KPLSTTPFETSFEKAMGLSCFGP 90

[Close]

BLAST of Bhi05G001573 vs. TrEMBL
Match: tr|A0A1S3C0Q4|A0A1S3C0Q4_CUCME (uncharacterized protein LOC103495542 OS=Cucumis melo OX=3656 GN=LOC103495542 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.1e-37
Identity = 77/85 (90.59%), Postives = 81/85 (95.29%), Query Frame = 0


Query: 1  MSCSRRAWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSVSQARKLSSPSATAV 60
          MSCSR+ WVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRS+SQA+KLSSPSA  V
Sbjct: 1  MSCSRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAATV 60

Query: 61 SDQKWKQSEESLRTVMYLSCWGPNN 86
          SD +WKQSEESLRTVMYLSCWGPNN
Sbjct: 61 SDHRWKQSEESLRTVMYLSCWGPNN 85

[Close]

BLAST of Bhi05G001573 vs. TrEMBL
Match: tr|A0A0A0K3P5|A0A0A0K3P5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046670 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.4e-37
Identity = 77/85 (90.59%), Postives = 80/85 (94.12%), Query Frame = 0


Query: 1  MSCSRRAWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSVSQARKLSSPSATAV 60
          MSC R+ WVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRS+SQA+KLSSPSA AV
Sbjct: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60

Query: 61 SDQKWKQSEESLRTVMYLSCWGPNN 86
          SD KW QSEESLRTVMYLSCWGPNN
Sbjct: 61 SDHKWNQSEESLRTVMYLSCWGPNN 85

[Close]

BLAST of Bhi05G001573 vs. TrEMBL
Match: tr|A0A1S3C1F8|A0A1S3C1F8_CUCME (uncharacterized protein LOC103495543 OS=Cucumis melo OX=3656 GN=LOC103495543 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.0e-28
Identity = 67/85 (78.82%), Postives = 73/85 (85.88%), Query Frame = 0


Query: 1  MSCSRRAWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSVSQARKLSSPSATAV 60
          MS SRRAW+VAASVGVVEALKDQGICRWNHTIRS  QYA+NHVRSV QA +L+  SA  V
Sbjct: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYARNHVRSVPQATRLTGSSAAVV 60

Query: 61 SDQ-KWKQSEESLRTVMYLSCWGPN 85
          S + + KQSEESLRTVMYLSCWGPN
Sbjct: 61 SSKPQQKQSEESLRTVMYLSCWGPN 85

[Close]

BLAST of Bhi05G001573 vs. TrEMBL
Match: tr|A0A218X2B0|A0A218X2B0_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr002782 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 7.7e-28
Identity = 67/88 (76.14%), Postives = 74/88 (84.09%), Query Frame = 0


Query: 1  MSCSRRAWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSVSQARKLSSPSATAV 60
          MS S+RAWVVA SVG VEALKDQG CRWN+TIRSL Q+AKNH RSVSQA+KLSS SA AV
Sbjct: 1  MSLSKRAWVVAVSVGAVEALKDQGFCRWNYTIRSLHQHAKNHARSVSQAKKLSSQSAAAV 60

Query: 61 S----DQKWKQSEESLRTVMYLSCWGPN 85
          S    D+K K++EESLR VMYLSCWGPN
Sbjct: 61 SRVRDDEKVKRAEESLRKVMYLSCWGPN 88

[Close]

BLAST of Bhi05G001573 vs. TrEMBL
Match: tr|A0A0D2PKH2|A0A0D2PKH2_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_005G206000 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.7e-27
Identity = 64/86 (74.42%), Postives = 74/86 (86.05%), Query Frame = 0


Query: 1  MSCSRRAWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSVSQARKLSSPSATAV 60
          MS + RAWVVAAS+G VEALKDQGICRWN+T+RS+ Q+AKNHVRS SQA+ LSS S+ A+
Sbjct: 1  MSSTSRAWVVAASIGAVEALKDQGICRWNYTVRSVVQHAKNHVRSASQAKNLSSQSSAAI 60

Query: 61 SD--QKWKQSEESLRTVMYLSCWGPN 85
          S    K+KQSEESLRTVMYLSCWGPN
Sbjct: 61 SKGLNKYKQSEESLRTVMYLSCWGPN 86

[Close]

BLAST of Bhi05G001573 vs. NCBI nr
Match: XP_008455355.1 (PREDICTED: uncharacterized protein LOC103495542 [Cucumis melo])

HSP 1 Score: 164.5 bits (415), Expect = 1.6e-37
Identity = 77/85 (90.59%), Postives = 81/85 (95.29%), Query Frame = 0


Query: 1  MSCSRRAWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSVSQARKLSSPSATAV 60
          MSCSR+ WVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRS+SQA+KLSSPSA  V
Sbjct: 1  MSCSRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAATV 60

Query: 61 SDQKWKQSEESLRTVMYLSCWGPNN 86
          SD +WKQSEESLRTVMYLSCWGPNN
Sbjct: 61 SDHRWKQSEESLRTVMYLSCWGPNN 85

[Close]

BLAST of Bhi05G001573 vs. NCBI nr
Match: XP_023554652.1 (uncharacterized protein LOC111811840 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 164.1 bits (414), Expect = 2.1e-37
Identity = 78/85 (91.76%), Postives = 82/85 (96.47%), Query Frame = 0


Query: 1  MSCSRRAWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSVSQARKLSSPSATAV 60
          MS SRRAWVVAASVGVVEALKDQG+CRWNHTI+S+QQYAKNHVRSVSQA+KLSSPS  AV
Sbjct: 1  MSSSRRAWVVAASVGVVEALKDQGVCRWNHTIKSVQQYAKNHVRSVSQAKKLSSPSTAAV 60

Query: 61 SDQKWKQSEESLRTVMYLSCWGPNN 86
          SDQKWKQSEESLRTVMYLSCWGPNN
Sbjct: 61 SDQKWKQSEESLRTVMYLSCWGPNN 85

[Close]

BLAST of Bhi05G001573 vs. NCBI nr
Match: XP_004136809.1 (PREDICTED: uncharacterized protein LOC101202743 [Cucumis sativus] >KGN43579.1 hypothetical protein Csa_7G046670 [Cucumis sativus])

HSP 1 Score: 163.3 bits (412), Expect = 3.6e-37
Identity = 77/85 (90.59%), Postives = 80/85 (94.12%), Query Frame = 0


Query: 1  MSCSRRAWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSVSQARKLSSPSATAV 60
          MSC R+ WVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRS+SQA+KLSSPSA AV
Sbjct: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60

Query: 61 SDQKWKQSEESLRTVMYLSCWGPNN 86
          SD KW QSEESLRTVMYLSCWGPNN
Sbjct: 61 SDHKWNQSEESLRTVMYLSCWGPNN 85

[Close]

BLAST of Bhi05G001573 vs. NCBI nr
Match: XP_022952158.1 (uncharacterized protein LOC111454919 [Cucurbita moschata])

HSP 1 Score: 162.2 bits (409), Expect = 8.0e-37
Identity = 77/85 (90.59%), Postives = 81/85 (95.29%), Query Frame = 0


Query: 1  MSCSRRAWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSVSQARKLSSPSATAV 60
          MS SRRAWVVAASVGVVEALKDQG+CRWNH I+S+QQYAKNHVRSVSQA+KLSSPS  AV
Sbjct: 1  MSSSRRAWVVAASVGVVEALKDQGVCRWNHAIKSVQQYAKNHVRSVSQAKKLSSPSTAAV 60

Query: 61 SDQKWKQSEESLRTVMYLSCWGPNN 86
          SDQKWKQSEESLRTVMYLSCWGPNN
Sbjct: 61 SDQKWKQSEESLRTVMYLSCWGPNN 85

[Close]

BLAST of Bhi05G001573 vs. NCBI nr
Match: XP_022969311.1 (uncharacterized protein LOC111468355 [Cucurbita maxima])

HSP 1 Score: 161.0 bits (406), Expect = 1.8e-36
Identity = 77/85 (90.59%), Postives = 81/85 (95.29%), Query Frame = 0


Query: 1  MSCSRRAWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSVSQARKLSSPSATAV 60
          MS SRRAWVVAASVGVVEALKDQG+CRWNHTI+S+QQYAKNHVRSVSQA+KLSS S  AV
Sbjct: 1  MSSSRRAWVVAASVGVVEALKDQGVCRWNHTIKSVQQYAKNHVRSVSQAKKLSSTSTAAV 60

Query: 61 SDQKWKQSEESLRTVMYLSCWGPNN 86
          SDQKWKQSEESLRTVMYLSCWGPNN
Sbjct: 61 SDQKWKQSEESLRTVMYLSCWGPNN 85

The following BLAST results are available for this feature:

BLAST of Bhi05G001573 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi05G001573 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G10265.1	1.5e-24	64.71	Wound-responsive family protein	[more]
AT4G10270.1	2.1e-23	57.78	Wound-responsive family protein	[more]
AT4G33560.1	1.9e-08	37.35	Wound-responsive family protein	[more]

BLAST of Bhi05G001573 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C0Q4\|A0A1S3C0Q4_CUCME	1.1e-37	90.59	uncharacterized protein LOC103495542 OS=Cucumis melo OX=3656 GN=LOC103495542 PE=...	[more]
tr\|A0A0A0K3P5\|A0A0A0K3P5_CUCSA	2.4e-37	90.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046670 PE=4 SV=1	[more]
tr\|A0A1S3C1F8\|A0A1S3C1F8_CUCME	2.0e-28	78.82	uncharacterized protein LOC103495543 OS=Cucumis melo OX=3656 GN=LOC103495543 PE=...	[more]
tr\|A0A218X2B0\|A0A218X2B0_PUNGR	7.7e-28	76.14	Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr002782 PE=4 SV=1	[more]
tr\|A0A0D2PKH2\|A0A0D2PKH2_GOSRA	1.7e-27	74.42	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_005G206000 PE=4 ...	[more]

BLAST of Bhi05G001573 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455355.1	1.6e-37	90.59	PREDICTED: uncharacterized protein LOC103495542 [Cucumis melo]	[more]
XP_023554652.1	2.1e-37	91.76	uncharacterized protein LOC111811840 [Cucurbita pepo subsp. pepo]	[more]
XP_004136809.1	3.6e-37	90.59	PREDICTED: uncharacterized protein LOC101202743 [Cucumis sativus] >KGN43579.1 hy...	[more]
XP_022952158.1	8.0e-37	90.59	uncharacterized protein LOC111454919 [Cucurbita moschata]	[more]
XP_022969311.1	1.8e-36	90.59	uncharacterized protein LOC111468355 [Cucurbita maxima]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR022251	DUF3774_wound-induced

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi05M001573	Bhi05M001573	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022251	Protein of unknown function wound-induced	PFAM	PF12609	DUF3774	coord: 10..83 e-value: 6.4E-34 score: 116.7
IPR022251	Protein of unknown function wound-induced	PANTHER	PTHR33090	FAMILY NOT NAMED	coord: 1..84
None	No IPR available	PANTHER	PTHR33090:SF8	SUBFAMILY NOT NAMED	coord: 1..84

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi05G001573	Cucumber (Chinese Long) v3	cucwgoB687
Bhi05G001573	Cucumber (Chinese Long) v2	cuwgoB662
Bhi05G001573	Bottle gourd (USVL1VR-Ls)	lsiwgoB063
Bhi05G001573	Bottle gourd (USVL1VR-Ls)	lsiwgoB116
Bhi05G001573	Melon (DHL92) v3.6.1	medwgoB221
Bhi05G001573	Melon (DHL92) v3.5.1	mewgoB221
Bhi05G001573	Watermelon (Charleston Gray)	wcgwgoB276
Bhi05G001573	Watermelon (97103) v2	wgowmbB251
Bhi05G001573	Watermelon (97103) v1	wgowmB274
Bhi05G001573	Silver-seed gourd	carwgoB0030
Bhi05G001573	Silver-seed gourd	carwgoB0847
Bhi05G001573	Silver-seed gourd	carwgoB1021
Bhi05G001573	Wax gourd	wgowgoB071
Bhi05G001573	Cucumber (Gy14) v1	cgywgoB288
Bhi05G001573	Cucumber (Gy14) v2	cgybwgoB633
Bhi05G001573	Cucurbita maxima (Rimu)	cmawgoB0117
Bhi05G001573	Cucurbita maxima (Rimu)	cmawgoB0643
Bhi05G001573	Cucurbita maxima (Rimu)	cmawgoB0740
Bhi05G001573	Cucurbita moschata (Rifu)	cmowgoB0109
Bhi05G001573	Cucurbita moschata (Rifu)	cmowgoB0643
Bhi05G001573	Cucurbita moschata (Rifu)	cmowgoB0730
Bhi05G001573	Cucurbita pepo (Zucchini)	cpewgoB0318
Bhi05G001573	Cucurbita pepo (Zucchini)	cpewgoB0844
Bhi05G001573	Cucurbita pepo (Zucchini)	cpewgoB0858
Bhi05G001573	Cucurbita pepo (Zucchini)	cpewgoB0933
Bhi05G001573	Wild cucumber (PI 183967)	cpiwgoB673