Bhi05G001429 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi05G001429
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Myb/SANT-like domain containing protein
Location	chr5 : 54262840 .. 54263090 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATGAATGTCAACAAACAATCTACAGCTGATTCAAGTAGGTTGAAACATATGTGGAGTAAGATAGAAGATGAGAAATTAGTAGAATGCTTATTGGAGTTATCTAACATTGGCACATGGAAGGCTGATAATGGTACTTTCAAATCAGGATTTCTCAATCAAATAGAGAAATGGATGGTTGAAAAAATTCATAATTGTGAAGTTAAGGCTCAACCACACAAAGAGTCTAGAGTTAAACTGTTGAAGAAATAG

mRNA sequence

ATATGAATGTCAACAAACAATCTACAGCTGATTCAAGTAGGTTGAAACATATGTGGAGTAAGATAGAAGATGAGAAATTAGTAGAATGCTTATTGGAGTTATCTAACATTGGCACATGGAAGGCTGATAATGGTACTTTCAAATCAGGATTTCTCAATCAAATAGAGAAATGGATGGTTGAAAAAATTCATAATTGTGAAGTTAAGGCTCAACCACACAAAGAGTCTAGAGTTAAACTGTTGAAGAAATAG

Coding sequence (CDS)

ATATGAATGTCAACAAACAATCTACAGCTGATTCAAGTAGGTTGAAACATATGTGGAGTAAGATAGAAGATGAGAAATTAGTAGAATGCTTATTGGAGTTATCTAACATTGGCACATGGAAGGCTGATAATGGTACTTTCAAATCAGGATTTCTCAATCAAATAGAGAAATGGATGGTTGAAAAAATTCATAATTGTGAAGTTAAGGCTCAACCACACAAAGAGTCTAGAGTTAAACTGTTGAAGAAATAG

Protein sequence

MNVNKQSTADSSRLKHMWSKIEDEKLVECLLELSNIGTWKADNGTFKSGFLNQIEKWMVEKIHNCEVKAQPHKESRVKLLKK

Homology

[Close]

BLAST of Bhi05G001429 vs. TrEMBL
Match: tr|A0A2P5FL77|A0A2P5FL77_9ROSA (Myb/SANT-like domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_057890 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.5e-17
Identity = 42/68 (61.76%), Postives = 55/68 (80.88%), Query Frame = 0


Query: 15 KHMWSKIEDEKLVECLLELSNIGTWKADNGTFKSGFLNQIEKWMVEKIHNCEVKAQPHKE 74
          KH W+ +ED KLVECLL+++N G WKA+NGTFK G+L Q+EK + EKI  C +KAQPH +
Sbjct: 14 KHQWTALEDSKLVECLLDITNSGKWKANNGTFKHGYLQQLEKLLNEKIPRCGLKAQPHID 73

Query: 75 SRVKLLKK 83
          SR+K+LKK
Sbjct: 74 SRIKILKK 81

[Close]

BLAST of Bhi05G001429 vs. TrEMBL
Match: tr|A0A2P5D960|A0A2P5D960_PARAD (Myb/SANT-like domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_085920 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.5e-17
Identity = 42/68 (61.76%), Postives = 55/68 (80.88%), Query Frame = 0


Query: 15 KHMWSKIEDEKLVECLLELSNIGTWKADNGTFKSGFLNQIEKWMVEKIHNCEVKAQPHKE 74
          KH W+ +ED KLVECLL+++N G WKA+NGTFK G+L Q+EK + EKI  C +KAQPH +
Sbjct: 14 KHQWTALEDSKLVECLLDITNSGKWKANNGTFKHGYLQQLEKLLNEKIPRCGLKAQPHID 73

Query: 75 SRVKLLKK 83
          SR+K+LKK
Sbjct: 74 SRIKILKK 81

[Close]

BLAST of Bhi05G001429 vs. TrEMBL
Match: tr|A0A199UW10|A0A199UW10_ANACO (Uncharacterized protein OS=Ananas comosus OX=4615 GN=ACMD2_25538 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.8e-16
Identity = 42/79 (53.16%), Postives = 56/79 (70.89%), Query Frame = 0


Query: 4  NKQSTADSSRLKHMWSKIEDEKLVECLLELSNIGTWKADNGTFKSGFLNQIEKWMVEKIH 63
          N Q    +  +KH W+K ED+KL+ECLL L+N G W+ADNG F+ GFL Q+EK M EK+ 
Sbjct: 6  NPQGKPRNRGIKHQWTKEEDDKLIECLLGLTNSGHWRADNGNFRCGFLQQLEKLMSEKLP 65

Query: 64 NCEVKAQPHKESRVKLLKK 83
           C +KA+PH  SR+KL K+
Sbjct: 66 GCGLKARPHITSRIKLWKR 84

[Close]

BLAST of Bhi05G001429 vs. TrEMBL
Match: tr|A0A2N9FKA2|A0A2N9FKA2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15417 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 9.4e-15
Identity = 45/84 (53.57%), Postives = 62/84 (73.81%), Query Frame = 0


Query: 3  VNKQSTADSSR---LKHMWSKIEDEKLVECLLELSNIG-TWKADNGTFKSGFLNQIEKWM 62
          VN   + D S     KH W+  EDEKLVECL++++N G TWKA+NG FKSG+L ++E+ M
Sbjct: 6  VNSTGSKDGSMQSGSKHQWTTTEDEKLVECLVDMANSGPTWKAENG-FKSGYLLELERMM 65

Query: 63 VEKIHNCEVKAQPHKESRVKLLKK 83
          +EKI  C+++AQPH E+R +LLKK
Sbjct: 66 LEKIPGCKLRAQPHIENRYRLLKK 88

[Close]

BLAST of Bhi05G001429 vs. TrEMBL
Match: tr|A0A2N9G0Q3|A0A2N9G0Q3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20741 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.1e-14
Identity = 44/84 (52.38%), Postives = 62/84 (73.81%), Query Frame = 0


Query: 3  VNKQSTADSSR---LKHMWSKIEDEKLVECLLELSNIG-TWKADNGTFKSGFLNQIEKWM 62
          VN   + D S     KH W+  EDEKLVECL++++N G TW+A+NG FKSG+L ++E+ M
Sbjct: 6  VNSTGSKDGSMQSGSKHQWTTTEDEKLVECLVDMANSGPTWRAENG-FKSGYLLELERMM 65

Query: 63 VEKIHNCEVKAQPHKESRVKLLKK 83
          +EKI  C+++AQPH E+R +LLKK
Sbjct: 66 LEKIPGCKLRAQPHIENRYRLLKK 88

[Close]

BLAST of Bhi05G001429 vs. NCBI nr
Match: XP_020101014.1 (uncharacterized protein LOC109718933 isoform X1 [Ananas comosus] >XP_020101016.1 uncharacterized protein LOC109718933 isoform X1 [Ananas comosus])

HSP 1 Score: 104.8 bits (260), Expect = 1.5e-19
Identity = 46/76 (60.53%), Postives = 60/76 (78.95%), Query Frame = 0


Query: 7   STADSSRLKHMWSKIEDEKLVECLLELSNIGTWKADNGTFKSGFLNQIEKWMVEKIHNCE 66
           S A +  +KH W+K EDEKL+ECLL+LSN G W+ADNGTF++G+L Q+E+WM EKI +CE
Sbjct: 32  SKAKNKGIKHQWTKHEDEKLIECLLDLSNSGQWRADNGTFRNGYLQQLERWMHEKIPDCE 91

Query: 67  VKAQPHKESRVKLLKK 83
           +K  PH ESR KL K+
Sbjct: 92  LKGVPHIESRFKLWKR 107

[Close]

BLAST of Bhi05G001429 vs. NCBI nr
Match: XP_020101017.1 (uncharacterized protein LOC109718933 isoform X2 [Ananas comosus] >XP_020101018.1 uncharacterized protein LOC109718933 isoform X2 [Ananas comosus])

HSP 1 Score: 104.8 bits (260), Expect = 1.5e-19
Identity = 46/76 (60.53%), Postives = 60/76 (78.95%), Query Frame = 0


Query: 7  STADSSRLKHMWSKIEDEKLVECLLELSNIGTWKADNGTFKSGFLNQIEKWMVEKIHNCE 66
          S A +  +KH W+K EDEKL+ECLL+LSN G W+ADNGTF++G+L Q+E+WM EKI +CE
Sbjct: 10 SKAKNKGIKHQWTKHEDEKLIECLLDLSNSGQWRADNGTFRNGYLQQLERWMHEKIPDCE 69

Query: 67 VKAQPHKESRVKLLKK 83
          +K  PH ESR KL K+
Sbjct: 70 LKGVPHIESRFKLWKR 85

[Close]

BLAST of Bhi05G001429 vs. NCBI nr
Match: XP_024022021.1 (uncharacterized protein LOC112091787 [Morus notabilis])

HSP 1 Score: 102.1 bits (253), Expect = 9.5e-19
Identity = 46/73 (63.01%), Postives = 58/73 (79.45%), Query Frame = 0


Query: 10  DSSRLKHMWSKIEDEKLVECLLELSNIGTWKADNGTFKSGFLNQIEKWMVEKIHNCEVKA 69
           D++  KH W+ +ED KLVECLL+++N G WKADNGTFK G+L Q+EK M EKI  C +KA
Sbjct: 49  DANVRKHQWTTLEDSKLVECLLDMANSGKWKADNGTFKPGYLQQLEKMMNEKIPQCGLKA 108

Query: 70  QPHKESRVKLLKK 83
           QPH +SRVK+LKK
Sbjct: 109 QPHIDSRVKILKK 121

[Close]

BLAST of Bhi05G001429 vs. NCBI nr
Match: PON69808.1 (Myb/SANT-like domain containing protein [Parasponia andersonii])

HSP 1 Score: 97.4 bits (241), Expect = 2.3e-17
Identity = 42/68 (61.76%), Postives = 55/68 (80.88%), Query Frame = 0


Query: 15 KHMWSKIEDEKLVECLLELSNIGTWKADNGTFKSGFLNQIEKWMVEKIHNCEVKAQPHKE 74
          KH W+ +ED KLVECLL+++N G WKA+NGTFK G+L Q+EK + EKI  C +KAQPH +
Sbjct: 14 KHQWTALEDSKLVECLLDITNSGKWKANNGTFKHGYLQQLEKLLNEKIPRCGLKAQPHID 73

Query: 75 SRVKLLKK 83
          SR+K+LKK
Sbjct: 74 SRIKILKK 81

[Close]

BLAST of Bhi05G001429 vs. NCBI nr
Match: PON98555.1 (Myb/SANT-like domain containing protein [Trema orientalis])

HSP 1 Score: 97.4 bits (241), Expect = 2.3e-17
Identity = 42/68 (61.76%), Postives = 55/68 (80.88%), Query Frame = 0


Query: 15 KHMWSKIEDEKLVECLLELSNIGTWKADNGTFKSGFLNQIEKWMVEKIHNCEVKAQPHKE 74
          KH W+ +ED KLVECLL+++N G WKA+NGTFK G+L Q+EK + EKI  C +KAQPH +
Sbjct: 14 KHQWTALEDSKLVECLLDITNSGKWKANNGTFKHGYLQQLEKLLNEKIPRCGLKAQPHID 73

Query: 75 SRVKLLKK 83
          SR+K+LKK
Sbjct: 74 SRIKILKK 81

The following BLAST results are available for this feature:

BLAST of Bhi05G001429 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi05G001429 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi05G001429 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2P5FL77\|A0A2P5FL77_9ROSA	1.5e-17	61.76	Myb/SANT-like domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x...	[more]
tr\|A0A2P5D960\|A0A2P5D960_PARAD	1.5e-17	61.76	Myb/SANT-like domain containing protein OS=Parasponia andersonii OX=3476 GN=PanW...	[more]
tr\|A0A199UW10\|A0A199UW10_ANACO	3.8e-16	53.16	Uncharacterized protein OS=Ananas comosus OX=4615 GN=ACMD2_25538 PE=4 SV=1	[more]
tr\|A0A2N9FKA2\|A0A2N9FKA2_FAGSY	9.4e-15	53.57	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15417 PE=4 SV=1	[more]
tr\|A0A2N9G0Q3\|A0A2N9G0Q3_FAGSY	2.1e-14	52.38	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20741 PE=4 SV=1	[more]

BLAST of Bhi05G001429 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_020101014.1	1.5e-19	60.53	uncharacterized protein LOC109718933 isoform X1 [Ananas comosus] >XP_020101016.1...	[more]
XP_020101017.1	1.5e-19	60.53	uncharacterized protein LOC109718933 isoform X2 [Ananas comosus] >XP_020101018.1...	[more]
XP_024022021.1	9.5e-19	63.01	uncharacterized protein LOC112091787 [Morus notabilis]	[more]
PON69808.1	2.3e-17	61.76	Myb/SANT-like domain containing protein [Parasponia andersonii]	[more]
PON98555.1	2.3e-17	61.76	Myb/SANT-like domain containing protein [Trema orientalis]	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi05M001429	Bhi05M001429	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31704	FAMILY NOT NAMED	coord: 9..82
None	No IPR available	PANTHER	PTHR31704:SF62	SUBFAMILY NOT NAMED	coord: 9..82

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi05G001429	Cucumber (Gy14) v1	cgywgoB145
Bhi05G001429	Cucumber (Gy14) v2	cgybwgoB641
Bhi05G001429	Cucurbita maxima (Rimu)	cmawgoB0115
Bhi05G001429	Cucurbita maxima (Rimu)	cmawgoB0652
Bhi05G001429	Cucurbita moschata (Rifu)	cmowgoB0115
Bhi05G001429	Cucurbita moschata (Rifu)	cmowgoB0653
Bhi05G001429	Cucurbita pepo (Zucchini)	cpewgoB0326
Bhi05G001429	Cucurbita pepo (Zucchini)	cpewgoB0851
Bhi05G001429	Wild cucumber (PI 183967)	cpiwgoB681
Bhi05G001429	Cucumber (Chinese Long) v3	cucwgoB695
Bhi05G001429	Cucumber (Chinese Long) v2	cuwgoB670
Bhi05G001429	Bottle gourd (USVL1VR-Ls)	lsiwgoB118
Bhi05G001429	Melon (DHL92) v3.6.1	medwgoB213
Bhi05G001429	Melon (DHL92) v3.5.1	mewgoB213
Bhi05G001429	Watermelon (Charleston Gray)	wcgwgoB266
Bhi05G001429	Watermelon (97103) v2	wgowmbB241
Bhi05G001429	Watermelon (97103) v1	wgowmB272