Bhi05G001394 (gene) Wax gourd

NameBhi05G001394
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionExpansin-like
Locationchr5 : 53315772 .. 53315993 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAGAAGTTATGGAGCTGTTTGGAAAACAGACCATGTACCTGAAGGTACATTACAATTGAGAATGGTGGTGACTTCTAGATACAATGGAAAATGGGTTTGGGCAAAGTCTATACTTCCTGTCAATTGGAGAGCTGGAGCGATTTACGATACTGGAGTTCAAATCAAAGATATTGTCAAAAAAGAGTTGCCCTCTTGGCAATGTGGTGGTGCACAATGA

mRNA sequence

ATGAAGAGAAGTTATGGAGCTGTTTGGAAAACAGACCATGTACCTGAAGGTACATTACAATTGAGAATGGTGGTGACTTCTAGATACAATGGAAAATGGGTTTGGGCAAAGTCTATACTTCCTGTCAATTGGAGAGCTGGAGCGATTTACGATACTGGAGTTCAAATCAAAGATATTGTCAAAAAAGAGTTGCCCTCTTGGCAATGTGGTGGTGCACAATGA

Coding sequence (CDS)

ATGAAGAGAAGTTATGGAGCTGTTTGGAAAACAGACCATGTACCTGAAGGTACATTACAATTGAGAATGGTGGTGACTTCTAGATACAATGGAAAATGGGTTTGGGCAAAGTCTATACTTCCTGTCAATTGGAGAGCTGGAGCGATTTACGATACTGGAGTTCAAATCAAAGATATTGTCAAAAAAGAGTTGCCCTCTTGGCAATGTGGTGGTGCACAATGA

Protein sequence

MKRSYGAVWKTDHVPEGTLQLRMVVTSRYNGKWVWAKSILPVNWRAGAIYDTGVQIKDIVKKELPSWQCGGAQ
BLAST of Bhi05G001394 vs. Swiss-Prot
Match: sp|Q9LZT4|EXLA1_ARATH (Expansin-like A1 OS=Arabidopsis thaliana OX=3702 GN=EXLA1 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 3.2e-17
Identity = 37/62 (59.68%), Postives = 46/62 (74.19%), Query Frame = 0

Query: 1   MKRSYGAVWKTDHVPEGTLQLRMVVTSRYNGKWVWAKSILPVNWRAGAIYDTGVQIKDIV 60
           M RS+GAVW TD VP G +Q R VVT  Y+GK +W++S+LP NW AG IYD GVQI DI 
Sbjct: 193 MTRSHGAVWVTDKVPTGAIQFRFVVTGGYDGKMIWSQSVLPSNWEAGKIYDAGVQITDIA 252

Query: 61  KK 63
           ++
Sbjct: 253 QE 254

BLAST of Bhi05G001394 vs. Swiss-Prot
Match: sp|Q9SVE5|EXLA2_ARATH (Expansin-like A2 OS=Arabidopsis thaliana OX=3702 GN=EXLA2 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 9.2e-17
Identity = 37/62 (59.68%), Postives = 45/62 (72.58%), Query Frame = 0

Query: 1   MKRSYGAVWKTDHVPEGTLQLRMVVTSRYNGKWVWAKSILPVNWRAGAIYDTGVQIKDIV 60
           M RS+GAVW TD VP G LQ R VVT+ Y+GK VW++ +LP NW AG  YD GVQI DI 
Sbjct: 193 MTRSHGAVWVTDKVPNGALQFRFVVTAGYDGKMVWSQRVLPANWEAGKSYDAGVQITDIA 252

Query: 61  KK 63
           ++
Sbjct: 253 QE 254

BLAST of Bhi05G001394 vs. Swiss-Prot
Match: sp|Q9LZT5|EXLA3_ARATH (Expansin-like A3 OS=Arabidopsis thaliana OX=3702 GN=EXLA3 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.2e-16
Identity = 36/62 (58.06%), Postives = 44/62 (70.97%), Query Frame = 0

Query: 1   MKRSYGAVWKTDHVPEGTLQLRMVVTSRYNGKWVWAKSILPVNWRAGAIYDTGVQIKDIV 60
           M RS+GAVW TD VP G LQ +  VT  Y+GK VW+K +LP NW +G IYD GVQI DI 
Sbjct: 192 MSRSHGAVWATDKVPTGALQFKFTVTGGYDGKTVWSKRVLPANWNSGRIYDAGVQITDIA 251

Query: 61  KK 63
           ++
Sbjct: 252 QE 253

BLAST of Bhi05G001394 vs. Swiss-Prot
Match: sp|Q8H274|EXLA3_ORYSJ (Expansin-like A3 OS=Oryza sativa subsp. japonica OX=39947 GN=EXLA3 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 3.0e-15
Identity = 33/63 (52.38%), Postives = 42/63 (66.67%), Query Frame = 0

Query: 1   MKRSYGAVWKTDHVPEGTLQLRMVVTSRYNGKWVWA-KSILPVNWRAGAIYDTGVQIKDI 60
           M R YG VW  D  P G LQ R VVT  Y+GKWVWA + +LP NW+ G +YDTG +I D+
Sbjct: 203 MTRVYGPVWSIDRAPNGPLQFRAVVTGGYDGKWVWADREVLPANWQPGQVYDTGARIADV 262

Query: 61  VKK 63
            ++
Sbjct: 263 ARE 265

BLAST of Bhi05G001394 vs. Swiss-Prot
Match: sp|Q10S70|EXLA1_ORYSJ (Expansin-like A1 OS=Oryza sativa subsp. japonica OX=39947 GN=EXLA1 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 8.6e-15
Identity = 34/63 (53.97%), Postives = 44/63 (69.84%), Query Frame = 0

Query: 1   MKRSYGAVWKTDHVPEGTLQLRMVVTSRYNGKWVWA-KSILPVNWRAGAIYDTGVQIKDI 60
           M R +G  W   + P G LQ+R+VVT  Y+GKWVWA + +LP  WRAG +YDTGVQI DI
Sbjct: 206 MTREHGPSWSMANAPPGPLQMRLVVTGGYDGKWVWADREVLPRRWRAGEVYDTGVQITDI 265

Query: 61  VKK 63
            ++
Sbjct: 266 AQE 268

BLAST of Bhi05G001394 vs. TAIR10
Match: AT3G45970.1 (expansin-like A1)

HSP 1 Score: 88.6 bits (218), Expect = 1.8e-18
Identity = 37/62 (59.68%), Postives = 46/62 (74.19%), Query Frame = 0

Query: 1   MKRSYGAVWKTDHVPEGTLQLRMVVTSRYNGKWVWAKSILPVNWRAGAIYDTGVQIKDIV 60
           M RS+GAVW TD VP G +Q R VVT  Y+GK +W++S+LP NW AG IYD GVQI DI 
Sbjct: 193 MTRSHGAVWVTDKVPTGAIQFRFVVTGGYDGKMIWSQSVLPSNWEAGKIYDAGVQITDIA 252

Query: 61  KK 63
           ++
Sbjct: 253 QE 254

BLAST of Bhi05G001394 vs. TAIR10
Match: AT4G38400.1 (expansin-like A2)

HSP 1 Score: 87.0 bits (214), Expect = 5.1e-18
Identity = 37/62 (59.68%), Postives = 45/62 (72.58%), Query Frame = 0

Query: 1   MKRSYGAVWKTDHVPEGTLQLRMVVTSRYNGKWVWAKSILPVNWRAGAIYDTGVQIKDIV 60
           M RS+GAVW TD VP G LQ R VVT+ Y+GK VW++ +LP NW AG  YD GVQI DI 
Sbjct: 193 MTRSHGAVWVTDKVPNGALQFRFVVTAGYDGKMVWSQRVLPANWEAGKSYDAGVQITDIA 252

Query: 61  KK 63
           ++
Sbjct: 253 QE 254

BLAST of Bhi05G001394 vs. TAIR10
Match: AT3G45960.2 (expansin-like A3)

HSP 1 Score: 86.7 bits (213), Expect = 6.7e-18
Identity = 36/62 (58.06%), Postives = 44/62 (70.97%), Query Frame = 0

Query: 1   MKRSYGAVWKTDHVPEGTLQLRMVVTSRYNGKWVWAKSILPVNWRAGAIYDTGVQIKDIV 60
           M RS+GAVW TD VP G LQ +  VT  Y+GK VW+K +LP NW +G IYD GVQI DI 
Sbjct: 192 MSRSHGAVWATDKVPTGALQFKFTVTGGYDGKTVWSKRVLPANWNSGRIYDAGVQITDIA 251

Query: 61  KK 63
           ++
Sbjct: 252 QE 253

BLAST of Bhi05G001394 vs. TrEMBL
Match: tr|A0A1S3BHW6|A0A1S3BHW6_CUCME (expansin-like A2 OS=Cucumis melo OX=3656 GN=LOC107990293 PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 4.6e-29
Identity = 58/70 (82.86%), Postives = 63/70 (90.00%), Query Frame = 0

Query: 1   MKRSYGAVWKTDHVPEGTLQLRMVVTSRYNGKWVWAKSILPVNWRAGAIYDTGVQIKDIV 60
           MKRSYGAVW+TD+VPEG LQLRMVVTS Y+GKWVWAKS+LP NWRAGAIYDTGVQIKDI 
Sbjct: 189 MKRSYGAVWETDNVPEGALQLRMVVTSGYDGKWVWAKSVLPANWRAGAIYDTGVQIKDIA 248

Query: 61  KKELPSWQCG 71
           K+  P WQCG
Sbjct: 249 KESCPPWQCG 258

BLAST of Bhi05G001394 vs. TrEMBL
Match: tr|A0A1S3BJD7|A0A1S3BJD7_CUCME (expansin-like A2 OS=Cucumis melo OX=3656 GN=LOC103490240 PE=3 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 6.2e-26
Identity = 51/70 (72.86%), Postives = 62/70 (88.57%), Query Frame = 0

Query: 1   MKRSYGAVWKTDHVPEGTLQLRMVVTSRYNGKWVWAKSILPVNWRAGAIYDTGVQIKDIV 60
           MKRSYGAVW+ +++PEG+LQLRMVVTS Y+GKWVWAKS+LP +W++GAIYDTGVQI DI 
Sbjct: 188 MKRSYGAVWEINNIPEGSLQLRMVVTSGYDGKWVWAKSVLPADWKSGAIYDTGVQINDIA 247

Query: 61  KKELPSWQCG 71
           K+  P WQCG
Sbjct: 248 KESCPPWQCG 257

BLAST of Bhi05G001394 vs. TrEMBL
Match: tr|A0A0A0K645|A0A0A0K645_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G019860 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 3.1e-25
Identity = 53/70 (75.71%), Postives = 58/70 (82.86%), Query Frame = 0

Query: 1  MKRSYGAVWKTDHVPEGTLQLRMVVTSRYNGKWVWAKSILPVNWRAGAIYDTGVQIKDIV 60
          MKRSYGAVW+TD+VPEG LQLRMVVTS Y+G  VWAKS+LP  WRAG IYDTGVQI DI 
Sbjct: 17 MKRSYGAVWETDNVPEGALQLRMVVTSGYDGNLVWAKSVLPATWRAGGIYDTGVQINDIA 76

Query: 61 KKELPSWQCG 71
          K+  P WQCG
Sbjct: 77 KESCPPWQCG 86

BLAST of Bhi05G001394 vs. TrEMBL
Match: tr|A0A1S3BIG0|A0A1S3BIG0_CUCME (expansin-like A1 OS=Cucumis melo OX=3656 GN=LOC103490238 PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 4.1e-22
Identity = 49/72 (68.06%), Postives = 56/72 (77.78%), Query Frame = 0

Query: 1   MKRSYGAVWKTDHVPEGTLQLRMVVTSRY-NGKWVWAKSILPVNWRAGAIYDTGVQIKDI 60
           MKR+YGA+W  + VPEG LQLRMVVTSRY NGKW+WA S+LP  W+ G IYDTGVQI DI
Sbjct: 192 MKRNYGAIWDINGVPEGGLQLRMVVTSRYDNGKWIWAGSVLPSGWKNGEIYDTGVQINDI 251

Query: 61  VKKELPSWQCGG 72
             +  P WQCGG
Sbjct: 252 AYEYCPPWQCGG 263

BLAST of Bhi05G001394 vs. TrEMBL
Match: tr|A0A0A0K2Q2|A0A0A0K2Q2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G019840 PE=3 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 2.7e-21
Identity = 47/72 (65.28%), Postives = 56/72 (77.78%), Query Frame = 0

Query: 1   MKRSYGAVWKTDHVPEGTLQLRMVVTSRY-NGKWVWAKSILPVNWRAGAIYDTGVQIKDI 60
           MKR+YG +W  + VP+G LQLRMVVTSRY NGKW+WA S+LP +W+ G IYDTGVQI DI
Sbjct: 165 MKRNYGGIWDINGVPKGGLQLRMVVTSRYDNGKWIWAGSVLPSDWKNGEIYDTGVQINDI 224

Query: 61  VKKELPSWQCGG 72
             +  P WQCGG
Sbjct: 225 AYEYCPPWQCGG 236

BLAST of Bhi05G001394 vs. NCBI nr
Match: XP_008447887.1 (PREDICTED: expansin-like A2 [Cucumis melo])

HSP 1 Score: 135.6 bits (340), Expect = 6.9e-29
Identity = 58/70 (82.86%), Postives = 63/70 (90.00%), Query Frame = 0

Query: 1   MKRSYGAVWKTDHVPEGTLQLRMVVTSRYNGKWVWAKSILPVNWRAGAIYDTGVQIKDIV 60
           MKRSYGAVW+TD+VPEG LQLRMVVTS Y+GKWVWAKS+LP NWRAGAIYDTGVQIKDI 
Sbjct: 189 MKRSYGAVWETDNVPEGALQLRMVVTSGYDGKWVWAKSVLPANWRAGAIYDTGVQIKDIA 248

Query: 61  KKELPSWQCG 71
           K+  P WQCG
Sbjct: 249 KESCPPWQCG 258

BLAST of Bhi05G001394 vs. NCBI nr
Match: XP_022952636.1 (expansin-like A2 [Cucurbita moschata])

HSP 1 Score: 127.5 bits (319), Expect = 1.9e-26
Identity = 54/73 (73.97%), Postives = 61/73 (83.56%), Query Frame = 0

Query: 1   MKRSYGAVWKTDHVPEGTLQLRMVVTSRYNGKWVWAKSILPVNWRAGAIYDTGVQIKDIV 60
           MKRSYGAVW+TD+VPEG LQLRMVVTS Y+GKWVWAKS+LP NW  GAI++TGVQI DI 
Sbjct: 188 MKRSYGAVWETDNVPEGALQLRMVVTSGYDGKWVWAKSVLPANWGVGAIFNTGVQINDIA 247

Query: 61  KKELPSWQCGGAQ 74
           K+  P WQCG  Q
Sbjct: 248 KESCPPWQCGDGQ 260

BLAST of Bhi05G001394 vs. NCBI nr
Match: XP_022969220.1 (expansin-like A2 [Cucurbita maxima])

HSP 1 Score: 127.5 bits (319), Expect = 1.9e-26
Identity = 54/73 (73.97%), Postives = 61/73 (83.56%), Query Frame = 0

Query: 1   MKRSYGAVWKTDHVPEGTLQLRMVVTSRYNGKWVWAKSILPVNWRAGAIYDTGVQIKDIV 60
           MKRSYGAVW+TD+VPEG LQLRMVVTS Y+GKWVWAKS+LP NW  GAI++TGVQI DI 
Sbjct: 188 MKRSYGAVWETDNVPEGALQLRMVVTSGYDGKWVWAKSVLPANWGVGAIFNTGVQINDIA 247

Query: 61  KKELPSWQCGGAQ 74
           K+  P WQCG  Q
Sbjct: 248 KESCPPWQCGDGQ 260

BLAST of Bhi05G001394 vs. NCBI nr
Match: XP_023554598.1 (expansin-like A2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 127.5 bits (319), Expect = 1.9e-26
Identity = 54/73 (73.97%), Postives = 61/73 (83.56%), Query Frame = 0

Query: 1   MKRSYGAVWKTDHVPEGTLQLRMVVTSRYNGKWVWAKSILPVNWRAGAIYDTGVQIKDIV 60
           MKRSYGAVW+TD+VPEG LQLRMVVTS Y+GKWVWAKS+LP NW  GAI++TGVQI DI 
Sbjct: 188 MKRSYGAVWETDNVPEGALQLRMVVTSGYDGKWVWAKSVLPANWGVGAIFNTGVQINDIA 247

Query: 61  KKELPSWQCGGAQ 74
           K+  P WQCG  Q
Sbjct: 248 KESCPPWQCGDGQ 260

BLAST of Bhi05G001394 vs. NCBI nr
Match: XP_022136197.1 (expansin-like A2 [Momordica charantia])

HSP 1 Score: 126.3 bits (316), Expect = 4.2e-26
Identity = 52/73 (71.23%), Postives = 62/73 (84.93%), Query Frame = 0

Query: 1   MKRSYGAVWKTDHVPEGTLQLRMVVTSRYNGKWVWAKSILPVNWRAGAIYDTGVQIKDIV 60
           MKR+YGAVW T+++PEG LQLRMVVTS Y+GKWVWAKS+LP +W++GAIYDTGVQI DI 
Sbjct: 188 MKRNYGAVWDTNNIPEGALQLRMVVTSGYDGKWVWAKSVLPADWKSGAIYDTGVQITDIA 247

Query: 61  KKELPSWQCGGAQ 74
           K+  P WQCG  Q
Sbjct: 248 KESCPPWQCGDGQ 260

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
sp|Q9LZT4|EXLA1_ARATH3.2e-1759.68Expansin-like A1 OS=Arabidopsis thaliana OX=3702 GN=EXLA1 PE=2 SV=1[more]
sp|Q9SVE5|EXLA2_ARATH9.2e-1759.68Expansin-like A2 OS=Arabidopsis thaliana OX=3702 GN=EXLA2 PE=2 SV=1[more]
sp|Q9LZT5|EXLA3_ARATH1.2e-1658.06Expansin-like A3 OS=Arabidopsis thaliana OX=3702 GN=EXLA3 PE=2 SV=1[more]
sp|Q8H274|EXLA3_ORYSJ3.0e-1552.38Expansin-like A3 OS=Oryza sativa subsp. japonica OX=39947 GN=EXLA3 PE=2 SV=1[more]
sp|Q10S70|EXLA1_ORYSJ8.6e-1553.97Expansin-like A1 OS=Oryza sativa subsp. japonica OX=39947 GN=EXLA1 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
AT3G45970.11.8e-1859.68expansin-like A1[more]
AT4G38400.15.1e-1859.68expansin-like A2[more]
AT3G45960.26.7e-1858.06expansin-like A3[more]
Match NameE-valueIdentityDescription
tr|A0A1S3BHW6|A0A1S3BHW6_CUCME4.6e-2982.86expansin-like A2 OS=Cucumis melo OX=3656 GN=LOC107990293 PE=3 SV=1[more]
tr|A0A1S3BJD7|A0A1S3BJD7_CUCME6.2e-2672.86expansin-like A2 OS=Cucumis melo OX=3656 GN=LOC103490240 PE=3 SV=1[more]
tr|A0A0A0K645|A0A0A0K645_CUCSA3.1e-2575.71Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G019860 PE=4 SV=1[more]
tr|A0A1S3BIG0|A0A1S3BIG0_CUCME4.1e-2268.06expansin-like A1 OS=Cucumis melo OX=3656 GN=LOC103490238 PE=3 SV=1[more]
tr|A0A0A0K2Q2|A0A0A0K2Q2_CUCSA2.7e-2165.28Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G019840 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
XP_008447887.16.9e-2982.86PREDICTED: expansin-like A2 [Cucumis melo][more]
XP_022952636.11.9e-2673.97expansin-like A2 [Cucurbita moschata][more]
XP_022969220.11.9e-2673.97expansin-like A2 [Cucurbita maxima][more]
XP_023554598.11.9e-2673.97expansin-like A2 [Cucurbita pepo subsp. pepo][more]
XP_022136197.14.2e-2671.23expansin-like A2 [Momordica charantia][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036749Expansin_CBD_sf
IPR007117Expansin_CBD
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005576 extracellular region
cellular_component GO:0009505 plant-type cell wall
cellular_component GO:0009506 plasmodesma

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi05M001394Bhi05M001394mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007117Expansin, cellulose-binding-like domainPFAMPF01357Pollen_allerg_1coord: 1..41
e-value: 1.4E-5
score: 25.0
IPR007117Expansin, cellulose-binding-like domainPROSITEPS50843EXPANSIN_CBDcoord: 1..52
score: 12.863
IPR036749Expansin, cellulose-binding-like domain superfamilyGENE3DG3DSA:2.60.40.760coord: 1..57
e-value: 2.7E-16
score: 61.2
IPR036749Expansin, cellulose-binding-like domain superfamilySUPERFAMILYSSF49590PHL pollen allergencoord: 1..52
NoneNo IPR availablePANTHERPTHR31692FAMILY NOT NAMEDcoord: 1..63
NoneNo IPR availablePANTHERPTHR31692:SF4EXPANSIN-LIKE A1-RELATEDcoord: 1..63