Bhi05G001103 (gene) Wax gourd

Overview
NameBhi05G001103
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionLOW QUALITY PROTEIN: beta-D-xylosidase 1-like
Locationchr5 : 44330917 .. 44331321 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGACCAACAATTTGAAAGCAAAATTAAAGAATATCGATCGATTGCACCTCCATCTTCGATCTCCCTCTCGATATCGAATCAAGAACACCAAAACTATTGACAAATCTCACACCATTATCATCTTTGCAACCACTTCAAACCAGATCTTGTCGCTGGAGAAACACTTAATCGGATTCAAAAAGGTTGTTCTCATGGTCGAGTTCGAGTTAGAATCCACATTTGCGATCATCTCAGGCAAGTTGATCAATTTGACACTTAAAGAAGCCAGACTGGAGTCCATGGTGGATGTCGATGGAGGCATTGATGCATCTCATTCTTGTTTGAGGAGAAAACCATCTCTTTTGATGTCGATGAGGGACTTCAAATGTGAAATTATGGATCAGCTTGGATTTAATAAATGA

mRNA sequence

ATGACGACCAACAATTTGAAAGCAAAATTAAAGAATATCGATCGATTGCACCTCCATCTTCGATCTCCCTCTCGATATCGAATCAAGAACACCAAAACTATTGACAAATCTCACACCATTATCATCTTTGCAACCACTTCAAACCAGATCTTGTCGCTGGAGAAACACTTAATCGGATTCAAAAAGGTTGTTCTCATGGTCGAGTTCGAGTTAGAATCCACATTTGCGATCATCTCAGGCAAGTTGATCAATTTGACACTTAAAGAAGCCAGACTGGAGTCCATGGTGGATGTCGATGGAGGCATTGATGCATCTCATTCTTGTTTGAGGAGAAAACCATCTCTTTTGATGTCGATGAGGGACTTCAAATGTGAAATTATGGATCAGCTTGGATTTAATAAATGA

Coding sequence (CDS)

ATGACGACCAACAATTTGAAAGCAAAATTAAAGAATATCGATCGATTGCACCTCCATCTTCGATCTCCCTCTCGATATCGAATCAAGAACACCAAAACTATTGACAAATCTCACACCATTATCATCTTTGCAACCACTTCAAACCAGATCTTGTCGCTGGAGAAACACTTAATCGGATTCAAAAAGGTTGTTCTCATGGTCGAGTTCGAGTTAGAATCCACATTTGCGATCATCTCAGGCAAGTTGATCAATTTGACACTTAAAGAAGCCAGACTGGAGTCCATGGTGGATGTCGATGGAGGCATTGATGCATCTCATTCTTGTTTGAGGAGAAAACCATCTCTTTTGATGTCGATGAGGGACTTCAAATGTGAAATTATGGATCAGCTTGGATTTAATAAATGA

Protein sequence

MTTNNLKAKLKNIDRLHLHLRSPSRYRIKNTKTIDKSHTIIIFATTSNQILSLEKHLIGFKKVVLMVEFELESTFAIISGKLINLTLKEARLESMVDVDGGIDASHSCLRRKPSLLMSMRDFKCEIMDQLGFNK
Homology
[Close]
BLAST of Bhi05G001103 vs. TrEMBL
Match: tr|A0A1S3C788|A0A1S3C788_CUCME (LOW QUALITY PROTEIN: beta-D-xylosidase 1-like OS=Cucumis melo OX=3656 GN=LOC103497802 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 7.1e-04
Identity = 26/44 (59.09%), Postives = 33/44 (75.00%), Query Frame = 0 

Query: 23  PSRYRIKNTKTIDKSHTIIIFATTSNQILSLEKHLIGFKKVVLM 67
           P +  +KNT T+D SHTI++F+T  N I S EKHLIGF+KV LM
Sbjct: 670 PIQVDVKNTGTVDGSHTILVFSTAPNPIWSPEKHLIGFEKVHLM 713

The following BLAST results are available for this feature:
BLAST of Bhi05G001103 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi05G001103 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi05G001103 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C788|A0A1S3C788_CUCME7.1e-0459.09LOW QUALITY PROTEIN: beta-D-xylosidase 1-like OS=Cucumis melo OX=3656 GN=LOC1034... [more]
BLAST of Bhi05G001103 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi05M001103Bhi05M001103mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi05G001103Wax gourdwgowgoB072
Bhi05G001103Cucumber (Gy14) v1cgywgoB172
Bhi05G001103Cucumber (Gy14) v1cgywgoB753
Bhi05G001103Cucumber (Gy14) v2cgybwgoB142
Bhi05G001103Cucumber (Gy14) v2cgybwgoB639
Bhi05G001103Cucurbita maxima (Rimu)cmawgoB0124
Bhi05G001103Cucurbita maxima (Rimu)cmawgoB0641
Bhi05G001103Cucurbita maxima (Rimu)cmawgoB0682
Bhi05G001103Cucurbita maxima (Rimu)cmawgoB0739
Bhi05G001103Cucurbita moschata (Rifu)cmowgoB0121
Bhi05G001103Cucurbita moschata (Rifu)cmowgoB0641
Bhi05G001103Cucurbita moschata (Rifu)cmowgoB0677
Bhi05G001103Cucurbita moschata (Rifu)cmowgoB0731
Bhi05G001103Cucurbita pepo (Zucchini)cpewgoB0316
Bhi05G001103Cucurbita pepo (Zucchini)cpewgoB0348
Bhi05G001103Cucurbita pepo (Zucchini)cpewgoB0857
Bhi05G001103Cucurbita pepo (Zucchini)cpewgoB0932
Bhi05G001103Wild cucumber (PI 183967)cpiwgoB146
Bhi05G001103Cucumber (Chinese Long) v3cucwgoB154
Bhi05G001103Cucumber (Chinese Long) v3cucwgoB692
Bhi05G001103Cucumber (Chinese Long) v2cuwgoB147
Bhi05G001103Bottle gourd (USVL1VR-Ls)lsiwgoB062
Bhi05G001103Bottle gourd (USVL1VR-Ls)lsiwgoB115
Bhi05G001103Melon (DHL92) v3.6.1medwgoB112
Bhi05G001103Melon (DHL92) v3.6.1medwgoB223
Bhi05G001103Melon (DHL92) v3.5.1mewgoB111
Bhi05G001103Melon (DHL92) v3.5.1mewgoB223
Bhi05G001103Watermelon (Charleston Gray)wcgwgoB157
Bhi05G001103Watermelon (Charleston Gray)wcgwgoB275
Bhi05G001103Watermelon (97103) v2wgowmbB240
Bhi05G001103Watermelon (97103) v2wgowmbB250
Bhi05G001103Watermelon (97103) v1wgowmB280
Bhi05G001103Watermelon (97103) v1wgowmB287
Bhi05G001103Silver-seed gourdcarwgoB0225
Bhi05G001103Silver-seed gourdcarwgoB0398
Bhi05G001103Silver-seed gourdcarwgoB1036