Bhi05G001048 (gene) Wax gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGATTTGGTAAAGCTTTCGAACGAAGTAATGGTGGAGATCATGTCACGGGTGCCGCCGGAGTCTTTGGCTCGATTCAAATGCGTCTCGAAATCCTGGTACGCTCTAATAAACGACCCTCAATTTTGCGGTTTTCTTCGAAACGAAAACGTTTTAGTGAAGCGTGTTGTGAAGAACAATGAGACTGGGAAGATGGAAACTAGATTCTCCTTCTTGAAATATCCTCTCAGAGGCGATGAAGATTCATCCATTGAGTTTGAGGATGTCCAACTTCCATGTTTTGTTGAGGACGAATATCCATATCTCTGCATCCATGGCCATTCTCAAGGCTTAGTTTGCCTCGTCTCCCATGGCAACAACCATATATTTCTCTATAACCCCACCACCGGAGAGATCCGCAAGCTCCCTGCCTCCATTCTTCACATTGAAACCGATTATTCCACCGAACAAGCTGTCTATTCCATCACCAATGCCGTCGGATTCGGGTAG ATGGCGGATTTGGTAAAGCTTTCGAACGAAGTAATGGTGGAGATCATGTCACGGGTGCCGCCGGAGTCTTTGGCTCGATTCAAATGCGTCTCGAAATCCTGGTACGCTCTAATAAACGACCCTCAATTTTGCGGTTTTCTTCGAAACGAAAACGTTTTAGTGAAGCGTGTTGTGAAGAACAATGAGACTGGGAAGATGGAAACTAGATTCTCCTTCTTGAAATATCCTCTCAGAGGCGATGAAGATTCATCCATTGAGTTTGAGGATGTCCAACTTCCATGTTTTGTTGAGGACGAATATCCATATCTCTGCATCCATGGCCATTCTCAAGGCTTAGTTTGCCTCGTCTCCCATGGCAACAACCATATATTTCTCTATAACCCCACCACCGGAGAGATCCGCAAGCTCCCTGCCTCCATTCTTCACATTGAAACCGATTATTCCACCGAACAAGCTGTCTATTCCATCACCAATGCCGTCGGATTCGGGTAG ATGGCGGATTTGGTAAAGCTTTCGAACGAAGTAATGGTGGAGATCATGTCACGGGTGCCGCCGGAGTCTTTGGCTCGATTCAAATGCGTCTCGAAATCCTGGTACGCTCTAATAAACGACCCTCAATTTTGCGGTTTTCTTCGAAACGAAAACGTTTTAGTGAAGCGTGTTGTGAAGAACAATGAGACTGGGAAGATGGAAACTAGATTCTCCTTCTTGAAATATCCTCTCAGAGGCGATGAAGATTCATCCATTGAGTTTGAGGATGTCCAACTTCCATGTTTTGTTGAGGACGAATATCCATATCTCTGCATCCATGGCCATTCTCAAGGCTTAGTTTGCCTCGTCTCCCATGGCAACAACCATATATTTCTCTATAACCCCACCACCGGAGAGATCCGCAAGCTCCCTGCCTCCATTCTTCACATTGAAACCGATTATTCCACCGAACAAGCTGTCTATTCCATCACCAATGCCGTCGGATTCGGGTAG MADLVKLSNEVMVEIMSRVPPESLARFKCVSKSWYALINDPQFCGFLRNENVLVKRVVKNNETGKMETRFSFLKYPLRGDEDSSIEFEDVQLPCFVEDEYPYLCIHGHSQGLVCLVSHGNNHIFLYNPTTGEIRKLPASILHIETDYSTEQAVYSITNAVGFG
BLAST of Bhi05G001048 vs. Swiss-Prot
Match: sp|Q8GXC7|FBK50_ARATH (F-box/kelch-repeat protein At3g06240 OS=Arabidopsis thaliana OX=3702 GN=At3g06240 PE=2 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 2.4e-09 Identity = 50/175 (28.57%), Postives = 80/175 (45.71%), Query Frame = 0
BLAST of Bhi05G001048 vs. Swiss-Prot
Match: sp|Q9MAG5|FB56_ARATH (Putative F-box protein At1g53370 OS=Arabidopsis thaliana OX=3702 GN=At1g53370 PE=4 SV=2) HSP 1 Score: 59.7 bits (143), Expect = 3.5e-08 Identity = 40/129 (31.01%), Postives = 64/129 (49.61%), Query Frame = 0
BLAST of Bhi05G001048 vs. Swiss-Prot
Match: sp|Q9SCL2|FB197_ARATH (F-box protein At3g49450 OS=Arabidopsis thaliana OX=3702 GN=At3g49450 PE=2 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 6.0e-08 Identity = 43/141 (30.50%), Postives = 73/141 (51.77%), Query Frame = 0
BLAST of Bhi05G001048 vs. Swiss-Prot
Match: sp|Q9LJ39|FB185_ARATH (Putative F-box protein At3g24700 OS=Arabidopsis thaliana OX=3702 GN=At3g24700 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.7e-07 Identity = 45/142 (31.69%), Postives = 69/142 (48.59%), Query Frame = 0
BLAST of Bhi05G001048 vs. Swiss-Prot
Match: sp|Q9FLS0|FB253_ARATH (F-box protein At5g07610 OS=Arabidopsis thaliana OX=3702 GN=At5g07610 PE=2 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 5.1e-07 Identity = 45/157 (28.66%), Postives = 74/157 (47.13%), Query Frame = 0
BLAST of Bhi05G001048 vs. TAIR10
Match: AT3G06240.1 (F-box family protein) HSP 1 Score: 63.5 bits (153), Expect = 1.3e-10 Identity = 50/175 (28.57%), Postives = 80/175 (45.71%), Query Frame = 0
BLAST of Bhi05G001048 vs. TAIR10
Match: AT3G49450.1 (F-box and associated interaction domains-containing protein) HSP 1 Score: 58.9 bits (141), Expect = 3.3e-09 Identity = 43/141 (30.50%), Postives = 73/141 (51.77%), Query Frame = 0
BLAST of Bhi05G001048 vs. TAIR10
Match: AT3G24700.1 (F-box and associated interaction domains-containing protein) HSP 1 Score: 57.4 bits (137), Expect = 9.6e-09 Identity = 45/142 (31.69%), Postives = 69/142 (48.59%), Query Frame = 0
BLAST of Bhi05G001048 vs. TAIR10
Match: AT5G49610.1 (F-box family protein) HSP 1 Score: 55.8 bits (133), Expect = 2.8e-08 Identity = 44/136 (32.35%), Postives = 67/136 (49.26%), Query Frame = 0
BLAST of Bhi05G001048 vs. TAIR10
Match: AT5G07610.1 (F-box family protein) HSP 1 Score: 55.8 bits (133), Expect = 2.8e-08 Identity = 45/157 (28.66%), Postives = 74/157 (47.13%), Query Frame = 0
BLAST of Bhi05G001048 vs. TrEMBL
Match: tr|A0A1S3B7G6|A0A1S3B7G6_CUCME (F-box protein CPR30-like OS=Cucumis melo OX=3656 GN=LOC103486997 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 9.5e-27 Identity = 77/168 (45.83%), Postives = 103/168 (61.31%), Query Frame = 0
BLAST of Bhi05G001048 vs. TrEMBL
Match: tr|A0A1S3B8N6|A0A1S3B8N6_CUCME (F-box protein CPR30-like OS=Cucumis melo OX=3656 GN=LOC103486995 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 9.5e-27 Identity = 78/168 (46.43%), Postives = 102/168 (60.71%), Query Frame = 0
BLAST of Bhi05G001048 vs. TrEMBL
Match: tr|A0A1S3B974|A0A1S3B974_CUCME (F-box protein CPR30-like OS=Cucumis melo OX=3656 GN=LOC103487173 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 2.7e-21 Identity = 73/168 (43.45%), Postives = 96/168 (57.14%), Query Frame = 0
BLAST of Bhi05G001048 vs. TrEMBL
Match: tr|A0A1S3B946|A0A1S3B946_CUCME (putative F-box/LRR-repeat/kelch-repeat protein At1g11620 OS=Cucumis melo OX=3656 GN=LOC103487129 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 1.0e-20 Identity = 67/164 (40.85%), Postives = 91/164 (55.49%), Query Frame = 0
BLAST of Bhi05G001048 vs. TrEMBL
Match: tr|A0A1S3B5Y1|A0A1S3B5Y1_CUCME (F-box protein CPR30-like OS=Cucumis melo OX=3656 GN=LOC103486531 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 5.1e-20 Identity = 64/160 (40.00%), Postives = 93/160 (58.13%), Query Frame = 0
BLAST of Bhi05G001048 vs. NCBI nr
Match: XP_022935692.1 (F-box protein CPR30-like [Cucurbita moschata]) HSP 1 Score: 137.9 bits (346), Expect = 3.1e-29 Identity = 88/169 (52.07%), Postives = 108/169 (63.91%), Query Frame = 0
BLAST of Bhi05G001048 vs. NCBI nr
Match: XP_022935691.1 (F-box protein CPR30-like [Cucurbita moschata]) HSP 1 Score: 136.3 bits (342), Expect = 9.0e-29 Identity = 87/170 (51.18%), Postives = 106/170 (62.35%), Query Frame = 0
BLAST of Bhi05G001048 vs. NCBI nr
Match: XP_023526117.1 (F-box protein CPR1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 135.6 bits (340), Expect = 1.5e-28 Identity = 83/168 (49.40%), Postives = 104/168 (61.90%), Query Frame = 0
BLAST of Bhi05G001048 vs. NCBI nr
Match: XP_022983805.1 (F-box protein CPR1-like [Cucurbita maxima]) HSP 1 Score: 133.7 bits (335), Expect = 5.8e-28 Identity = 86/169 (50.89%), Postives = 108/169 (63.91%), Query Frame = 0
BLAST of Bhi05G001048 vs. NCBI nr
Match: XP_022159389.1 (F-box/kelch-repeat protein At3g06240-like [Momordica charantia]) HSP 1 Score: 131.0 bits (328), Expect = 3.8e-27 Identity = 73/163 (44.79%), Postives = 101/163 (61.96%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |