Bhi05G000428 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi05G000428
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	ATP synthase epsilon chain, chloroplastic
Location	chr5 : 15806838 .. 15807264 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCGATCCCCTTTTGACTGTACAAGAATATGTGGAGCTCGGCATGTCTGGAAGCACAGGAGAACGTTCTTTTGCTAATATTATCACCAGTATTCGATACTGGATCATTCATAGTGGCCAAATTGGTGTATTACCAGATCACGCACCTATTGCCACAGCTATAGATATAGGTATTTTAAAAATACGCCTTACTCCTAATGACGGATGGTTAACGATGGCTCTGATGGTTGGTTTTGCTAGAATAGGCAATAATGAGGTCACTATTTTAGTAAATGATGCGGAGAAGGCTAGTGACATTGATCCACAAAAAGCTCAGCAAACTCTTGAAATAGCGGAAGCTCAGGGCAAGAGACAAACAATCGAGGCAAATTTAGCTCTCAGACGAGCTAGGACACGAGTAGAGGCTATCAATGGCGTACCTAGTTAA

mRNA sequence

AATCGATCCCCTTTTGACTGTACAAGAATATGTGGAGCTCGGCATGTCTGGAAGCACAGGAGAACGTTCTTTTGCTAATATTATCACCAGTATTCGATACTGGATCATTCATAGTGGCCAAATTGGTGTATTACCAGATCACGCACCTATTGCCACAGCTATAGATATAGGTATTTTAAAAATACGCCTTACTCCTAATGACGGATGGTTAACGATGGCTCTGATGGTTGGTTTTGCTAGAATAGGCAATAATGAGGTCACTATTTTAGTAAATGATGCGGAGAAGGCTAGTGACATTGATCCACAAAAAGCTCAGCAAACTCTTGAAATAGCGGAAGCTCAGGGCAAGAGACAAACAATCGAGGCAAATTTAGCTCTCAGACGAGCTAGGACACGAGTAGAGGCTATCAATGGCGTACCTAGTTAA

Coding sequence (CDS)

AATCGATCCCCTTTTGACTGTACAAGAATATGTGGAGCTCGGCATGTCTGGAAGCACAGGAGAACGTTCTTTTGCTAATATTATCACCAGTATTCGATACTGGATCATTCATAGTGGCCAAATTGGTGTATTACCAGATCACGCACCTATTGCCACAGCTATAGATATAGGTATTTTAAAAATACGCCTTACTCCTAATGACGGATGGTTAACGATGGCTCTGATGGTTGGTTTTGCTAGAATAGGCAATAATGAGGTCACTATTTTAGTAAATGATGCGGAGAAGGCTAGTGACATTGATCCACAAAAAGCTCAGCAAACTCTTGAAATAGCGGAAGCTCAGGGCAAGAGACAAACAATCGAGGCAAATTTAGCTCTCAGACGAGCTAGGACACGAGTAGAGGCTATCAATGGCGTACCTAGTTAA

Protein sequence

IDPLLTVQEYVELGMSGSTGERSFANIITSIRYWIIHSGQIGVLPDHAPIATAIDIGILKIRLTPNDGWLTMALMVGFARIGNNEVTILVNDAEKASDIDPQKAQQTLEIAEAQGKRQTIEANLALRRARTRVEAINGVPS

Homology

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BLAST of Bhi05G000428 vs. Swiss-Prot
Match: sp|Q4VZG9|ATPE_CUCSA (ATP synthase epsilon chain, chloroplastic OS=Cucumis sativus OX=3659 GN=atpE PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.5e-47
Identity = 101/112 (90.18%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 35  IIHSGQIGVLPDHAPIATAIDIGILKIRLTPNDGWLTMALMVGFARIGNNEVTILVNDAE 94
           + +SGQIGVLPDHAPIATA+DIGILKIRLTPNDGWLTMALM GFARIGNNEVTILVNDAE
Sbjct: 25  VTNSGQIGVLPDHAPIATAVDIGILKIRLTPNDGWLTMALMGGFARIGNNEVTILVNDAE 84

Query: 95  KASDIDPQKAQQTLEIAE-----AQGKRQTIEANLALRRARTRVEAINGVPS 142
           KASDIDPQ+AQQTLEIAE     AQGKRQTIEANLALRRARTRVEAINGVPS
Sbjct: 85  KASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS 136

[Close]

BLAST of Bhi05G000428 vs. Swiss-Prot
Match: sp|Q1KXV3|ATPE_HELAN (ATP synthase epsilon chain, chloroplastic OS=Helianthus annuus OX=4232 GN=atpE PE=3 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.5e-39
Identity = 88/108 (81.48%), Postives = 98/108 (90.74%), Query Frame = 0


Query: 37  HSGQIGVLPDHAPIATAIDIGILKIRLTPNDGWLTMALMVGFARIGNNEVTILVNDAEKA 96
           +SGQIGVLP+HAPIATA+DIGIL+IRL  ND WLTMALM GFARIGNNE+T+LVNDAEK+
Sbjct: 27  NSGQIGVLPNHAPIATAVDIGILRIRL--NDQWLTMALMGGFARIGNNEITVLVNDAEKS 86

Query: 97  SDIDPQKAQQTLEIAE-----AQGKRQTIEANLALRRARTRVEAINGV 140
           SDIDPQ+AQQTLEIAE     A+GKRQTIEANLALRRARTRVEAIN +
Sbjct: 87  SDIDPQEAQQTLEIAEAALRKAEGKRQTIEANLALRRARTRVEAINAI 132

[Close]

BLAST of Bhi05G000428 vs. Swiss-Prot
Match: sp|Q70XZ7|ATPE_AMBTC (ATP synthase epsilon chain, chloroplastic OS=Amborella trichopoda OX=13333 GN=atpE PE=3 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 3.3e-39
Identity = 89/110 (80.91%), Postives = 97/110 (88.18%), Query Frame = 0


Query: 37  HSGQIGVLPDHAPIATAIDIGILKIRLTPNDGWLTMALMVGFARIGNNEVTILVNDAEKA 96
           +SGQIGVLP+HAPIATA+DIGILKIRL   + WLTMALM GFARIGNNE+TILVNDAEK 
Sbjct: 27  NSGQIGVLPNHAPIATAVDIGILKIRL--QEQWLTMALMGGFARIGNNEITILVNDAEKG 86

Query: 97  SDIDPQKAQQTLEIAE-----AQGKRQTIEANLALRRARTRVEAINGVPS 142
           SDIDPQ+AQQTLEIAE     A+GKRQTIEANLALRRARTRVEAIN + S
Sbjct: 87  SDIDPQEAQQTLEIAEANLSRAEGKRQTIEANLALRRARTRVEAINAISS 134

[Close]

BLAST of Bhi05G000428 vs. Swiss-Prot
Match: sp|A0ZZ41|ATPE_GOSBA (ATP synthase epsilon chain, chloroplastic OS=Gossypium barbadense OX=3634 GN=atpE PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 5.7e-39
Identity = 88/108 (81.48%), Postives = 96/108 (88.89%), Query Frame = 0


Query: 37  HSGQIGVLPDHAPIATAIDIGILKIRLTPNDGWLTMALMVGFARIGNNEVTILVNDAEKA 96
           +SGQIGVLP+HAPIATA+DIGIL+IRL  ND WLTMALM GFARIGNNE+TILVNDAEK 
Sbjct: 27  NSGQIGVLPNHAPIATAVDIGILRIRL--NDQWLTMALMGGFARIGNNEITILVNDAEKG 86

Query: 97  SDIDPQKAQQTLEIAE-----AQGKRQTIEANLALRRARTRVEAINGV 140
           SDIDPQ+AQQ LEIAE     A+GKRQTIEANLALRRARTRVEAIN +
Sbjct: 87  SDIDPQEAQQALEIAEANLRKAEGKRQTIEANLALRRARTRVEAINAI 132

[Close]

BLAST of Bhi05G000428 vs. Swiss-Prot
Match: sp|Q2L911|ATPE_GOSHI (ATP synthase epsilon chain, chloroplastic OS=Gossypium hirsutum OX=3635 GN=atpE PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 5.7e-39
Identity = 88/108 (81.48%), Postives = 96/108 (88.89%), Query Frame = 0


Query: 37  HSGQIGVLPDHAPIATAIDIGILKIRLTPNDGWLTMALMVGFARIGNNEVTILVNDAEKA 96
           +SGQIGVLP+HAPIATA+DIGIL+IRL  ND WLTMALM GFARIGNNE+TILVNDAEK 
Sbjct: 27  NSGQIGVLPNHAPIATAVDIGILRIRL--NDQWLTMALMGGFARIGNNEITILVNDAEKG 86

Query: 97  SDIDPQKAQQTLEIAE-----AQGKRQTIEANLALRRARTRVEAINGV 140
           SDIDPQ+AQQ LEIAE     A+GKRQTIEANLALRRARTRVEAIN +
Sbjct: 87  SDIDPQEAQQALEIAEANLRKAEGKRQTIEANLALRRARTRVEAINAI 132

[Close]

BLAST of Bhi05G000428 vs. TAIR10
Match: ATCG00470.1 (ATP synthase epsilon chain)

HSP 1 Score: 155.2 bits (391), Expect = 2.9e-38
Identity = 86/108 (79.63%), Postives = 95/108 (87.96%), Query Frame = 0


Query: 37  HSGQIGVLPDHAPIATAIDIGILKIRLTPNDGWLTMALMVGFARIGNNEVTILVNDAEKA 96
           +SGQIGVL +HAPIATA+DIGILKIRL   + WLTMALM GFARIGNNE+TILVNDAEK 
Sbjct: 27  NSGQIGVLANHAPIATAVDIGILKIRLA--NQWLTMALMGGFARIGNNEITILVNDAEKN 86

Query: 97  SDIDPQKAQQTLEIAE-----AQGKRQTIEANLALRRARTRVEAINGV 140
           SDIDPQ+AQQTLEIAE     A+GKRQTIEANLALRRARTRVEA+N +
Sbjct: 87  SDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI 132

[Close]

BLAST of Bhi05G000428 vs. TAIR10
Match: ATCG00580.1 (photosystem II reaction center protein E)

HSP 1 Score: 50.8 bits (120), Expect = 7.8e-07
Identity = 22/24 (91.67%), Postives = 24/24 (100.00%), Query Frame = 0


Query: 15 MSGSTGERSFANIITSIRYWIIHS 39
          MSGSTGERSFA+IITSIRYW+IHS
Sbjct: 1  MSGSTGERSFADIITSIRYWVIHS 24

[Close]

BLAST of Bhi05G000428 vs. TrEMBL
Match: tr|X2EZM8|X2EZM8_LAGSI (ATP synthase epsilon chain, chloroplastic OS=Lagenaria siceraria OX=3668 GN=atpE PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.0e-45
Identity = 101/112 (90.18%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 35  IIHSGQIGVLPDHAPIATAIDIGILKIRLTPNDGWLTMALMVGFARIGNNEVTILVNDAE 94
           + +SGQIGVLPDHAPIATA+DIGILKIRLTPNDGWLTMALM GFARIGNNEVTILVNDAE
Sbjct: 25  VTNSGQIGVLPDHAPIATAVDIGILKIRLTPNDGWLTMALMGGFARIGNNEVTILVNDAE 84

Query: 95  KASDIDPQKAQQTLEIAE-----AQGKRQTIEANLALRRARTRVEAINGVPS 142
           KASDIDPQ+AQQTLEIAE     AQGKRQTIEANLALRRARTRVEAINGVPS
Sbjct: 85  KASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS 136

[Close]

BLAST of Bhi05G000428 vs. TrEMBL
Match: tr|A0A249RXP3|A0A249RXP3_CUCME (ATP synthase epsilon chain, chloroplastic OS=Cucumis melo subsp. agrestis OX=217619 GN=atpE PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.0e-45
Identity = 101/112 (90.18%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 35  IIHSGQIGVLPDHAPIATAIDIGILKIRLTPNDGWLTMALMVGFARIGNNEVTILVNDAE 94
           + +SGQIGVLPDHAPIATA+DIGILKIRLTPNDGWLTMALM GFARIGNNEVTILVNDAE
Sbjct: 25  VTNSGQIGVLPDHAPIATAVDIGILKIRLTPNDGWLTMALMGGFARIGNNEVTILVNDAE 84

Query: 95  KASDIDPQKAQQTLEIAE-----AQGKRQTIEANLALRRARTRVEAINGVPS 142
           KASDIDPQ+AQQTLEIAE     AQGKRQTIEANLALRRARTRVEAINGVPS
Sbjct: 85  KASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS 136

[Close]

BLAST of Bhi05G000428 vs. TrEMBL
Match: tr|A0A286NFP7|A0A286NFP7_CUCME (ATP synthase epsilon chain, chloroplastic OS=Cucumis melo var. flexuosus OX=1120798 GN=atpE PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.0e-45
Identity = 101/112 (90.18%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 35  IIHSGQIGVLPDHAPIATAIDIGILKIRLTPNDGWLTMALMVGFARIGNNEVTILVNDAE 94
           + +SGQIGVLPDHAPIATA+DIGILKIRLTPNDGWLTMALM GFARIGNNEVTILVNDAE
Sbjct: 25  VTNSGQIGVLPDHAPIATAVDIGILKIRLTPNDGWLTMALMGGFARIGNNEVTILVNDAE 84

Query: 95  KASDIDPQKAQQTLEIAE-----AQGKRQTIEANLALRRARTRVEAINGVPS 142
           KASDIDPQ+AQQTLEIAE     AQGKRQTIEANLALRRARTRVEAINGVPS
Sbjct: 85  KASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS 136

[Close]

BLAST of Bhi05G000428 vs. TrEMBL
Match: tr|A0A1P8LDH2|A0A1P8LDH2_CITLA (ATP synthase CF1 epsilon subunit OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=atpE PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.0e-45
Identity = 101/112 (90.18%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 35  IIHSGQIGVLPDHAPIATAIDIGILKIRLTPNDGWLTMALMVGFARIGNNEVTILVNDAE 94
           + +SGQIGVLPDHAPIATA+DIGILKIRLTPNDGWLTMALM GFARIGNNEVTILVNDAE
Sbjct: 25  VTNSGQIGVLPDHAPIATAVDIGILKIRLTPNDGWLTMALMGGFARIGNNEVTILVNDAE 84

Query: 95  KASDIDPQKAQQTLEIAE-----AQGKRQTIEANLALRRARTRVEAINGVPS 142
           KASDIDPQ+AQQTLEIAE     AQGKRQTIEANLALRRARTRVEAINGVPS
Sbjct: 85  KASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS 136

[Close]

BLAST of Bhi05G000428 vs. TrEMBL
Match: tr|A0A218KG49|A0A218KG49_CUCSA (ATP synthase epsilon chain, chloroplastic OS=Cucumis sativus var. hardwickii OX=319220 GN=atpE PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.0e-45
Identity = 101/112 (90.18%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 35  IIHSGQIGVLPDHAPIATAIDIGILKIRLTPNDGWLTMALMVGFARIGNNEVTILVNDAE 94
           + +SGQIGVLPDHAPIATA+DIGILKIRLTPNDGWLTMALM GFARIGNNEVTILVNDAE
Sbjct: 25  VTNSGQIGVLPDHAPIATAVDIGILKIRLTPNDGWLTMALMGGFARIGNNEVTILVNDAE 84

Query: 95  KASDIDPQKAQQTLEIAE-----AQGKRQTIEANLALRRARTRVEAINGVPS 142
           KASDIDPQ+AQQTLEIAE     AQGKRQTIEANLALRRARTRVEAINGVPS
Sbjct: 85  KASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS 136

[Close]

BLAST of Bhi05G000428 vs. NCBI nr
Match: YP_009346490.1 (ATP synthase CF1 epsilon subunit (chloroplast) [Cucumis x hytivus] >AOW71100.1 ATP synthase CF1 epsilon subunit (chloroplast) [Cucumis x hytivus])

HSP 1 Score: 190.3 bits (482), Expect = 4.5e-45
Identity = 101/112 (90.18%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 35  IIHSGQIGVLPDHAPIATAIDIGILKIRLTPNDGWLTMALMVGFARIGNNEVTILVNDAE 94
           + +SGQIGVLPDHAPIATA+DIGILKIRLTPNDGWLTMALM GFARIGNNEVTILVNDAE
Sbjct: 25  VTNSGQIGVLPDHAPIATAVDIGILKIRLTPNDGWLTMALMGGFARIGNNEVTILVNDAE 84

Query: 95  KASDIDPQKAQQTLEIAE-----AQGKRQTIEANLALRRARTRVEAINGVPS 142
           KASDIDPQ+AQQTLEIAE     AQGKRQTIEANLALRRARTRVEAINGVPS
Sbjct: 85  KASDIDPQEAQQTLEIAEANLKKAQGKRQTIEANLALRRARTRVEAINGVPS 136

[Close]

BLAST of Bhi05G000428 vs. NCBI nr
Match: YP_247605.1 (ATP synthase CF1 epsilon subunit [Cucumis sativus] >YP_004841789.1 ATP synthase CF1 epsilon subunit [Cucumis melo subsp. melo] >YP_009004050.1 ATP synthase CF1 epsilon subunit [Cucumis hystrix] >YP_009317392.1 ATP synthase CF1 epsilon subunit (chloroplast) [Coccinia grandis] >YP_009325995.1 ATP synthase CF1 epsilon subunit (chloroplast) [Citrullus lanatus] >YP_009348037.1 ATP synthase CF1 epsilon subunit (plastid) [Citrullus mucosospermus] >YP_009420800.1 ATP synthase CF1 epsilon subunit (chloroplast) [Citrullus colocynthis] >YP_009431563.1 ATP synthase CF1 epsilon subunit (chloroplast) [Citrullus amarus] >YP_009431648.1 ATP synthase CF1 epsilon subunit (chloroplast) [Citrullus rehmii] >YP_009456152.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >Q4VZG9.1 RecName: Full=ATP synthase epsilon chain, chloroplastic; AltName: Full=ATP synthase F1 sector epsilon subunit; AltName: Full=F-ATPase epsilon subunit >CAJ00764.1 ATP synthase CF1 epsilon chain (chloroplast) [Cucumis sativus] >AAZ94657.1 ATPase epsilon subunit (chloroplast) [Cucumis sativus] >ABI97423.1 ATP synthase CF1 epsilon subunit (chloroplast) [Cucumis sativus] >ABI98751.1 ATP synthase CF1 epsilon subunit (chloroplast) [Cucumis sativus] >AEM76898.1 ATP synthase CF1 epsilon subunit (chloroplast) [Cucumis melo subsp. melo] >AEW67086.1 ATP synthase epsilon subunit (chloroplast) [Citrullus lanatus] >AHJ61392.1 ATP synthase CF1 epsilon subunit (plastid) [Cucumis hystrix] >AHM88711.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM88770.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM88828.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM88885.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM88943.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM89001.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM89060.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM89119.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM89178.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM89237.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM89296.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM89356.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM89415.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM89474.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM89533.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM89593.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM89652.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM89711.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM89770.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM89829.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM89888.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM89947.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM90006.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM90065.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM90124.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM90183.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM90242.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM90301.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM90360.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM90419.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM90478.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM90537.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM90596.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM90655.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM90714.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM90773.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM90832.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM90891.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM90950.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM91009.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM91068.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM91126.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM91186.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM91244.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AHM91301.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >ALF03307.1 ATP synthase CF1 epsilon subunit (chloroplast) [Cucumis sativus var. hardwickii] >ANF28383.1 ATP synthase CF1 epsilon subunit (chloroplast) [Cucumis sativus var. hardwickii] >AOX48761.1 ATP synthase CF1 epsilon subunit (chloroplast) [Coccinia grandis] >AOX48846.1 ATP synthase CF1 epsilon subunit (chloroplast) [Coccinia grandis] >APD52486.1 ATP synthase CF1 epsilon subunit (chloroplast) [Citrullus lanatus] >APW82467.1 ATP synthase CF1 epsilon subunit (plastid) [Citrullus lanatus subsp. vulgaris] >APW82552.1 ATP synthase CF1 epsilon subunit (plastid) [Citrullus lanatus subsp. vulgaris] >APW82637.1 ATP synthase CF1 epsilon subunit (plastid) [Citrullus lanatus subsp. vulgaris] >APW82722.1 ATP synthase CF1 epsilon subunit (plastid) [Citrullus mucosospermus] >APW82807.1 ATP synthase CF1 epsilon subunit (plastid) [Citrullus mucosospermus] >APW82892.1 ATP synthase CF1 epsilon subunit (plastid) [Citrullus lanatus subsp. vulgaris] >APW82977.1 ATP synthase CF1 epsilon subunit (plastid) [Citrullus lanatus subsp. vulgaris] >APW83062.1 ATP synthase CF1 epsilon subunit (plastid) [Citrullus lanatus subsp. vulgaris] >APW83147.1 ATP synthase CF1 epsilon subunit (plastid) [Citrullus lanatus subsp. vulgaris] >APW83232.1 ATP synthase CF1 epsilon subunit (plastid) [Citrullus lanatus subsp. vulgaris] >APW83317.1 ATP synthase CF1 epsilon subunit (plastid) [Citrullus mucosospermus] >ARQ16084.1 ATP synthase CF1 epsilon subunit (chloroplast) [Cucumis sativus] >ARQ16167.1 ATP synthase CF1 epsilon subunit (chloroplast) [Cucumis sativus] >ARQ16250.1 ATP synthase CF1 epsilon subunit (chloroplast) [Cucumis sativus] >ARQ16333.1 ATP synthase CF1 epsilon subunit (chloroplast) [Cucumis sativus] >ASP44463.1 ATP synthase CF1 epsilon subunit (chloroplast) [Citrullus colocynthis] >ASY96160.1 ATP synthase CF1 epsilon subunit (chloroplast) [Citrullus amarus] >ASY96245.1 ATP synthase CF1 epsilon subunit (chloroplast) [Citrullus rehmii] >ASY96416.1 ATP synthase CF1 epsilon subunit (chloroplast) [Cucumis melo subsp. agrestis] >ASY96503.1 ATP synthase CF1 epsilon subunit (chloroplast) [Cucumis melo subsp. agrestis] >ASY96590.1 ATP synthase CF1 epsilon subunit (chloroplast) [Cucumis melo var. conomon] >ASY96677.1 ATP synthase CF1 epsilon subunit (chloroplast) [Cucumis melo var. makuwa] >ASY96764.1 ATP synthase CF1 epsilon subunit (chloroplast) [Cucumis melo var. momordica] >ASY96851.1 ATP synthase CF1 epsilon subunit (chloroplast) [Cucumis melo var. dudaim] >ASY96938.1 ATP synthase CF1 epsilon subunit (chloroplast) [Cucumis melo var. cantalupo] >ASY97025.1 ATP synthase CF1 epsilon subunit (chloroplast) [Cucumis melo var. cantalupo] >ASY97112.1 ATP synthase CF1 epsilon subunit (chloroplast) [Cucumis melo var. inodorus] >ASY97199.1 ATP synthase CF1 epsilon subunit (chloroplast) [Cucumis melo var. cantalupo] >ASY97286.1 ATP synthase CF1 epsilon subunit (chloroplast) [Cucumis melo var. flexuosus] >ASY97373.1 ATP synthase CF1 epsilon subunit (chloroplast) [Cucumis melo var. flexuosus] >ASY97459.1 ATP synthase CF1 epsilon subunit (chloroplast) [Cucumis sativus var. hardwickii] >AUJ21918.1 ATP synthase CF1 epsilon subunit (chloroplast) [Lagenaria siceraria] >AVE15337.1 AtpE (chloroplast) [Cucumis sativus var. sativus])

HSP 1 Score: 190.3 bits (482), Expect = 4.5e-45
Identity = 101/112 (90.18%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 35  IIHSGQIGVLPDHAPIATAIDIGILKIRLTPNDGWLTMALMVGFARIGNNEVTILVNDAE 94
           + +SGQIGVLPDHAPIATA+DIGILKIRLTPNDGWLTMALM GFARIGNNEVTILVNDAE
Sbjct: 25  VTNSGQIGVLPDHAPIATAVDIGILKIRLTPNDGWLTMALMGGFARIGNNEVTILVNDAE 84

Query: 95  KASDIDPQKAQQTLEIAE-----AQGKRQTIEANLALRRARTRVEAINGVPS 142
           KASDIDPQ+AQQTLEIAE     AQGKRQTIEANLALRRARTRVEAINGVPS
Sbjct: 85  KASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS 136

[Close]

BLAST of Bhi05G000428 vs. NCBI nr
Match: ASY96329.1 (ATP synthase CF1 epsilon subunit (chloroplast) [Cucumis melo subsp. agrestis])

HSP 1 Score: 188.3 bits (477), Expect = 1.7e-44
Identity = 100/112 (89.29%), Postives = 104/112 (92.86%), Query Frame = 0


Query: 35  IIHSGQIGVLPDHAPIATAIDIGILKIRLTPNDGWLTMALMVGFARIGNNEVTILVNDAE 94
           + +SGQIGVLPDHAPIATA+DIGILKIRL PNDGWLTMALM GFARIGNNEVTILVNDAE
Sbjct: 25  VTNSGQIGVLPDHAPIATAVDIGILKIRLNPNDGWLTMALMGGFARIGNNEVTILVNDAE 84

Query: 95  KASDIDPQKAQQTLEIAE-----AQGKRQTIEANLALRRARTRVEAINGVPS 142
           KASDIDPQ+AQQTLEIAE     AQGKRQTIEANLALRRARTRVEAINGVPS
Sbjct: 85  KASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS 136

[Close]

BLAST of Bhi05G000428 vs. NCBI nr
Match: AXR94510.1 (ATP synthase CF1 epsilon subunit (chloroplast) [Hodgsonia macrocarpa] >AXR94595.1 ATP synthase CF1 epsilon subunit (chloroplast) [Hodgsonia macrocarpa] >AXR94679.1 ATP synthase CF1 epsilon subunit (chloroplast) [Hodgsonia macrocarpa] >AXR94764.1 ATP synthase CF1 epsilon subunit (chloroplast) [Hodgsonia macrocarpa])

HSP 1 Score: 186.0 bits (471), Expect = 8.6e-44
Identity = 98/112 (87.50%), Postives = 104/112 (92.86%), Query Frame = 0


Query: 35  IIHSGQIGVLPDHAPIATAIDIGILKIRLTPNDGWLTMALMVGFARIGNNEVTILVNDAE 94
           + +SGQIGVLPDHAPIATA+DIG+L+IR TPNDGWLTMALM GFARIGNNEVTILVNDAE
Sbjct: 25  VTNSGQIGVLPDHAPIATAVDIGVLRIRPTPNDGWLTMALMGGFARIGNNEVTILVNDAE 84

Query: 95  KASDIDPQKAQQTLEIAE-----AQGKRQTIEANLALRRARTRVEAINGVPS 142
           KASDIDPQ+AQQTLEIAE     AQGKRQTIEANLALRRARTRVEAINGVPS
Sbjct: 85  KASDIDPQEAQQTLEIAEANLKKAQGKRQTIEANLALRRARTRVEAINGVPS 136

[Close]

BLAST of Bhi05G000428 vs. NCBI nr
Match: YP_009447456.1 (ATP synthase CF1 epsilon subunit (chloroplast) [Cucurbita maxima] >ALO22035.1 AtpE (plastid) [Cucurbita ecuadorensis] >ALO22306.1 AtpE (plastid) [Cucurbita maxima subsp. andreana] >ATY69874.1 ATP synthase CF1 epsilon subunit (chloroplast) [Cucurbita maxima])

HSP 1 Score: 182.6 bits (462), Expect = 9.5e-43
Identity = 97/112 (86.61%), Postives = 103/112 (91.96%), Query Frame = 0


Query: 35  IIHSGQIGVLPDHAPIATAIDIGILKIRLTPNDGWLTMALMVGFARIGNNEVTILVNDAE 94
           + +SGQIGVLP+HAPIAT +DIGIL+IRLT NDGWLTMALM GFARIGNNEVTILVNDAE
Sbjct: 25  VTNSGQIGVLPNHAPIATGVDIGILRIRLTDNDGWLTMALMGGFARIGNNEVTILVNDAE 84

Query: 95  KASDIDPQKAQQTLEIAE-----AQGKRQTIEANLALRRARTRVEAINGVPS 142
           KASDIDPQ+AQQTLEIAE     AQGKRQTIEANLALRRARTRVEAINGVPS
Sbjct: 85  KASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS 136

The following BLAST results are available for this feature:

BLAST of Bhi05G000428 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q4VZG9\|ATPE_CUCSA	1.5e-47	90.18	ATP synthase epsilon chain, chloroplastic OS=Cucumis sativus OX=3659 GN=atpE PE=...	[more]
sp\|Q1KXV3\|ATPE_HELAN	1.5e-39	81.48	ATP synthase epsilon chain, chloroplastic OS=Helianthus annuus OX=4232 GN=atpE P...	[more]
sp\|Q70XZ7\|ATPE_AMBTC	3.3e-39	80.91	ATP synthase epsilon chain, chloroplastic OS=Amborella trichopoda OX=13333 GN=at...	[more]
sp\|A0ZZ41\|ATPE_GOSBA	5.7e-39	81.48	ATP synthase epsilon chain, chloroplastic OS=Gossypium barbadense OX=3634 GN=atp...	[more]
sp\|Q2L911\|ATPE_GOSHI	5.7e-39	81.48	ATP synthase epsilon chain, chloroplastic OS=Gossypium hirsutum OX=3635 GN=atpE ...	[more]

BLAST of Bhi05G000428 vs. TAIR10


Match Name	E-value	Identity	Description
ATCG00470.1	2.9e-38	79.63	ATP synthase epsilon chain	[more]
ATCG00580.1	7.8e-07	91.67	photosystem II reaction center protein E	[more]

BLAST of Bhi05G000428 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|X2EZM8\|X2EZM8_LAGSI	3.0e-45	90.18	ATP synthase epsilon chain, chloroplastic OS=Lagenaria siceraria OX=3668 GN=atpE...	[more]
tr\|A0A249RXP3\|A0A249RXP3_CUCME	3.0e-45	90.18	ATP synthase epsilon chain, chloroplastic OS=Cucumis melo subsp. agrestis OX=217...	[more]
tr\|A0A286NFP7\|A0A286NFP7_CUCME	3.0e-45	90.18	ATP synthase epsilon chain, chloroplastic OS=Cucumis melo var. flexuosus OX=1120...	[more]
tr\|A0A1P8LDH2\|A0A1P8LDH2_CITLA	3.0e-45	90.18	ATP synthase CF1 epsilon subunit OS=Citrullus lanatus subsp. vulgaris OX=260674 ...	[more]
tr\|A0A218KG49\|A0A218KG49_CUCSA	3.0e-45	90.18	ATP synthase epsilon chain, chloroplastic OS=Cucumis sativus var. hardwickii OX=...	[more]

BLAST of Bhi05G000428 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009346490.1	4.5e-45	90.18	ATP synthase CF1 epsilon subunit (chloroplast) [Cucumis x hytivus] >AOW71100.1 A...	[more]
YP_247605.1	4.5e-45	90.18	ATP synthase CF1 epsilon subunit [Cucumis sativus] >YP_004841789.1 ATP synthase ...	[more]
ASY96329.1	1.7e-44	89.29	ATP synthase CF1 epsilon subunit (chloroplast) [Cucumis melo subsp. agrestis]	[more]
AXR94510.1	8.6e-44	87.50	ATP synthase CF1 epsilon subunit (chloroplast) [Hodgsonia macrocarpa] >AXR94595....	[more]
YP_009447456.1	9.5e-43	86.61	ATP synthase CF1 epsilon subunit (chloroplast) [Cucurbita maxima] >ALO22035.1 At...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0015986	ATP synthesis coupled proton transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0046933	proton-transporting ATP synthase activity, rotational mechanism

Vocabulary: **Cellular Component**
Term	Definition
GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)

Vocabulary: **INTERPRO**
Term	Definition
IPR020546	ATP_synth_F1_dsu/esu_N
IPR001469	ATP_synth_F1_dsu/esu
IPR036771	ATPsynth_dsu/esu_N

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi05M000428	Bhi05M000428	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 103..123
None	No IPR available	PANTHER	PTHR13822:SF8	ATP SYNTHASE EPSILON CHAIN, CHLOROPLASTIC	coord: 37..138
None	No IPR available	SUPERFAMILY	SSF161045	Cytochrome b559 subunits	coord: 17..44
IPR036771	F0F1 ATP synthase delta/epsilon subunit, N-terminal	GENE3D	G3DSA:2.60.15.10		coord: 36..139 e-value: 3.5E-20 score: 74.1
IPR036771	F0F1 ATP synthase delta/epsilon subunit, N-terminal	SUPERFAMILY	SSF51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain	coord: 37..94
IPR001469	ATP synthase, F1 complex, delta/epsilon subunit	TIGRFAM	TIGR01216	TIGR01216	coord: 38..137 e-value: 1.7E-24 score: 84.3
IPR001469	ATP synthase, F1 complex, delta/epsilon subunit	PANTHER	PTHR13822	ATP SYNTHASE DELTA/EPSILON CHAIN	coord: 37..138
IPR001469	ATP synthase, F1 complex, delta/epsilon subunit	HAMAP	MF_00530	ATP_synth_epsil_bac	coord: 11..135 score: 15.85
IPR001469	ATP synthase, F1 complex, delta/epsilon subunit	CDD	cd12152	F1-ATPase_delta	coord: 38..130 e-value: 9.067E-25 score: 92.1896
IPR020546	ATP synthase, F1 complex, delta/epsilon subunit, N-terminal	PFAM	PF02823	ATP-synt_DE_N	coord: 38..93 e-value: 1.3E-13 score: 50.5
IPR020546	ATP synthase, F1 complex, delta/epsilon subunit, N-terminal	PRODOM	PD000944		coord: 37..99 e-value: 7.0E-18 score: 218.0

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi05G000428	Cucumber (Gy14) v1	cgywgoB625
Bhi05G000428	Cucumber (Gy14) v2	cgybwgoB292
Bhi05G000428	Cucurbita maxima (Rimu)	cmawgoB0646
Bhi05G000428	Cucurbita maxima (Rimu)	cmawgoB0737
Bhi05G000428	Cucurbita moschata (Rifu)	cmowgoB0645
Bhi05G000428	Cucurbita moschata (Rifu)	cmowgoB0728
Bhi05G000428	Cucurbita pepo (Zucchini)	cpewgoB0320
Bhi05G000428	Cucurbita pepo (Zucchini)	cpewgoB0930
Bhi05G000428	Wild cucumber (PI 183967)	cpiwgoB305
Bhi05G000428	Cucumber (Chinese Long) v3	cucwgoB307
Bhi05G000428	Cucumber (Chinese Long) v2	cuwgoB302
Bhi05G000428	Bottle gourd (USVL1VR-Ls)	lsiwgoB460
Bhi05G000428	Melon (DHL92) v3.6.1	medwgoB409
Bhi05G000428	Melon (DHL92) v3.5.1	mewgoB407
Bhi05G000428	Watermelon (Charleston Gray)	wcgwgoB034
Bhi05G000428	Watermelon (97103) v2	wgowmbB264
Bhi05G000428	Watermelon (97103) v1	wgowmB242
Bhi05G000428	Silver-seed gourd	carwgoB0268
Bhi05G000428	Silver-seed gourd	carwgoB0918