Bhi05G000426 (gene) Wax gourd

Overview
NameBhi05G000426
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr5 : 15576139 .. 15576531 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACTTACCGACCATTGATGGGATGGATGAGGTTTTTCTAGATACATCCATTAGTAGGCGTACTAGATCAAGTAACGATACGAGAGGAACGAAATGCAAGAGGACTCCTTTCCAATCTGAAATGCTTGACATTGTACGCACAGCAATGGACGTGCAGGAAAGTAAAATGGAGAAACTTGTACAATGGCAGAAAGAGAAATATGAATTTGCGCTCAAGAGGTGTCAGGAGGTCATCGAACAAATCTACCAAGTTGAGGGTTTAAAGGAGGACGATCAGTTGAGCCTCATAAATCTGTTGGTGAATGATATTCAGCAAACATACGGTTTTCTAGTCATTCCACCACAATTAAGGAAAAAGTATTCAATGCGTTTGTTGGGCAAGACTAACTAA

mRNA sequence

ATGAACTTACCGACCATTGATGGGATGGATGAGGTTTTTCTAGATACATCCATTAGTAGGCGTACTAGATCAAGTAACGATACGAGAGGAACGAAATGCAAGAGGACTCCTTTCCAATCTGAAATGCTTGACATTGTACGCACAGCAATGGACGTGCAGGAAAGTAAAATGGAGAAACTTGTACAATGGCAGAAAGAGAAATATGAATTTGCGCTCAAGAGGTGTCAGGAGGTCATCGAACAAATCTACCAAGTTGAGGGTTTAAAGGAGGACGATCAGTTGAGCCTCATAAATCTGTTGGTGAATGATATTCAGCAAACATACGGTTTTCTAGTCATTCCACCACAATTAAGGAAAAAGTATTCAATGCGTTTGTTGGGCAAGACTAACTAA

Coding sequence (CDS)

ATGAACTTACCGACCATTGATGGGATGGATGAGGTTTTTCTAGATACATCCATTAGTAGGCGTACTAGATCAAGTAACGATACGAGAGGAACGAAATGCAAGAGGACTCCTTTCCAATCTGAAATGCTTGACATTGTACGCACAGCAATGGACGTGCAGGAAAGTAAAATGGAGAAACTTGTACAATGGCAGAAAGAGAAATATGAATTTGCGCTCAAGAGGTGTCAGGAGGTCATCGAACAAATCTACCAAGTTGAGGGTTTAAAGGAGGACGATCAGTTGAGCCTCATAAATCTGTTGGTGAATGATATTCAGCAAACATACGGTTTTCTAGTCATTCCACCACAATTAAGGAAAAAGTATTCAATGCGTTTGTTGGGCAAGACTAACTAA

Protein sequence

MNLPTIDGMDEVFLDTSISRRTRSSNDTRGTKCKRTPFQSEMLDIVRTAMDVQESKMEKLVQWQKEKYEFALKRCQEVIEQIYQVEGLKEDDQLSLINLLVNDIQQTYGFLVIPPQLRKKYSMRLLGKTN
Homology
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BLAST of Bhi05G000426 vs. NCBI nr
Match: XP_022158565.1 (uncharacterized protein LOC111025018 [Momordica charantia])

HSP 1 Score: 75.1 bits (183), Expect = 2.0e-10
Identity = 41/125 (32.80%), Postives = 80/125 (64.00%), Query Frame = 0 

Query: 5   TIDGMDEVFLDTSISRRTRSSNDTRGTKCKRTPFQSEMLDIVRTAMDVQESKMEKLVQWQ 64
           T D ++E   +T  S+ T  ++ + G+K KR+ + SEM+D+VRT M +Q + +EK+  W 
Sbjct: 94  TEDAIEEDLPNTPTSKPTIGTS-SGGSKRKRSGYTSEMVDVVRTNMRMQTAHLEKMATWP 153

Query: 65  KEKYEFALKRCQEVIEQIYQVEGLKEDDQLSLINLLVNDIQQTYGFLVIPPQLRKKYSMR 124
            +K E  + R + V +Q+ Q+  L+ +D + L+ +L+ +++++  FL +P + +K + M+
Sbjct: 154 DKKEEKKIARRKIVHDQLKQIPNLEANDYVRLVGILMTNVKKSISFLEVPIEFKKMFCMQ 213

Query: 125 LLGKT 130
           LLGK+
Sbjct: 214 LLGKS 217

The following BLAST results are available for this feature:
BLAST of Bhi05G000426 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi05G000426 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi05G000426 vs. TrEMBL
Match NameE-valueIdentityDescription
BLAST of Bhi05G000426 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022158565.12.0e-1032.80uncharacterized protein LOC111025018 [Momordica charantia][more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi05M000426Bhi05M000426mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi05G000426Cucumber (Gy14) v1cgywgoB625
Bhi05G000426Cucumber (Gy14) v2cgybwgoB292
Bhi05G000426Cucurbita maxima (Rimu)cmawgoB0646
Bhi05G000426Cucurbita maxima (Rimu)cmawgoB0737
Bhi05G000426Cucurbita moschata (Rifu)cmowgoB0645
Bhi05G000426Cucurbita moschata (Rifu)cmowgoB0728
Bhi05G000426Cucurbita pepo (Zucchini)cpewgoB0320
Bhi05G000426Cucurbita pepo (Zucchini)cpewgoB0930
Bhi05G000426Wild cucumber (PI 183967)cpiwgoB305
Bhi05G000426Cucumber (Chinese Long) v3cucwgoB307
Bhi05G000426Cucumber (Chinese Long) v2cuwgoB302
Bhi05G000426Bottle gourd (USVL1VR-Ls)lsiwgoB460
Bhi05G000426Melon (DHL92) v3.6.1medwgoB409
Bhi05G000426Melon (DHL92) v3.5.1mewgoB407
Bhi05G000426Watermelon (Charleston Gray)wcgwgoB034
Bhi05G000426Watermelon (97103) v2wgowmbB264
Bhi05G000426Watermelon (97103) v1wgowmB242
Bhi05G000426Silver-seed gourdcarwgoB0268
Bhi05G000426Silver-seed gourdcarwgoB0918