Bhi05G000415 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi05G000415
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Ankyrin repeat-containing protein
Location	chr5 : 14921019 .. 14921252 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGAGGTTGAAACCATCCTTGGCCAAGAAGCTTAACCCAAAGGGGTATAGCCCTATTCACTTGGCATTGCAAAATCATCAAATCGAGATCGTGTTACGACTCATCGATGTCGACCTAGATCTCATAAGCATACAAGGGAGGGAGGGCTTAAGTCCATTGCACGTTGCATCTTTTGGAGGAAAAGAGGAAGTGTTGGCTAAATTTTTTGGTTTTATGTCCAAAATCTATTAA

mRNA sequence

ATGATGAGGTTGAAACCATCCTTGGCCAAGAAGCTTAACCCAAAGGGGTATAGCCCTATTCACTTGGCATTGCAAAATCATCAAATCGAGATCGTGTTACGACTCATCGATGTCGACCTAGATCTCATAAGCATACAAGGGAGGGAGGGCTTAAGTCCATTGCACGTTGCATCTTTTGGAGGAAAAGAGGAAGTGTTGGCTAAATTTTTTGGTTTTATGTCCAAAATCTATTAA

Coding sequence (CDS)

ATGATGAGGTTGAAACCATCCTTGGCCAAGAAGCTTAACCCAAAGGGGTATAGCCCTATTCACTTGGCATTGCAAAATCATCAAATCGAGATCGTGTTACGACTCATCGATGTCGACCTAGATCTCATAAGCATACAAGGGAGGGAGGGCTTAAGTCCATTGCACGTTGCATCTTTTGGAGGAAAAGAGGAAGTGTTGGCTAAATTTTTTGGTTTTATGTCCAAAATCTATTAA

Protein sequence

MMRLKPSLAKKLNPKGYSPIHLALQNHQIEIVLRLIDVDLDLISIQGREGLSPLHVASFGGKEEVLAKFFGFMSKIY

Homology

[Close]

BLAST of Bhi05G000415 vs. TAIR10
Match: AT4G11000.1 (Ankyrin repeat family protein)

HSP 1 Score: 47.4 bits (111), Expect = 4.7e-06
Identity = 22/33 (66.67%), Postives = 27/33 (81.82%), Query Frame = 0


Query: 1   MMRLKPSLAKKLNPKGYSPIHLALQNHQIEIVL 34
           +M LKPSLA KLN  G+SP+HLALQN+ I+ VL
Sbjct: 93  LMTLKPSLALKLNVSGFSPLHLALQNNHIQTVL 125

[Close]

BLAST of Bhi05G000415 vs. TrEMBL
Match: tr|W9S5M4|W9S5M4_9ROSA (Ankyrin repeat-containing protein OS=Morus notabilis OX=981085 GN=L484_023411 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.8e-13
Identity = 38/69 (55.07%), Postives = 51/69 (73.91%), Query Frame = 0


Query: 1   MMRLKPSLAKKLNPKGYSPIHLALQNHQIEIVLRLIDVDLDLISIQGREGLSPLHVASFG 60
           MMRL PS AK+LNP G+SP+ LALQN   + VLRL+ +D DL+ +QGREG+SPLH  +  
Sbjct: 55  MMRLNPSFAKRLNPDGFSPLQLALQNAHFQTVLRLLAMDGDLVRVQGREGMSPLHYVAKH 114

Query: 61  GKEEVLAKF 70
           G  ++L+ F
Sbjct: 115 GNNQLLSAF 123

[Close]

BLAST of Bhi05G000415 vs. TrEMBL
Match: tr|G7LJ91|G7LJ91_MEDTR (Ankyrin repeat protein OS=Medicago truncatula OX=3880 GN=11441519 PE=4 SV=2)

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-12
Identity = 37/69 (53.62%), Postives = 54/69 (78.26%), Query Frame = 0


Query: 1   MMRLKPSLAKKLNPKGYSPIHLALQNHQIEIVLRLIDVDLDLISIQGREGLSPLHVASFG 60
           +M LKPS A KLNP+G+SPIHLA+QN Q ++V R + ++ DL+ ++GR+GL+PLH AS  
Sbjct: 63  IMTLKPSFALKLNPQGFSPIHLAMQNDQKQMVYRFVKINKDLVRVRGRDGLTPLHFASQI 122

Query: 61  GKEEVLAKF 70
           G+ ++LA F
Sbjct: 123 GEVDLLAHF 131

[Close]

BLAST of Bhi05G000415 vs. TrEMBL
Match: tr|W9SDK9|W9SDK9_9ROSA (Ankyrin repeat-containing protein OS=Morus notabilis OX=981085 GN=L484_023413 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-12
Identity = 37/67 (55.22%), Postives = 51/67 (76.12%), Query Frame = 0


Query: 1   MMRLKPSLAKKLNPKGYSPIHLALQNHQIEIVLRLIDVDLDLISIQGREGLSPLHVASFG 60
           MMRL PS AK+LNP G+SP+ LALQN +I+ VLRL+ +D DL+ +QGRE +SPLH  +  
Sbjct: 55  MMRLNPSFAKRLNPDGFSPLQLALQNDRIQTVLRLLAMDRDLVRVQGREDMSPLHYVAKH 114

Query: 61  GKEEVLA 68
           G  ++L+
Sbjct: 115 GNNQLLS 121

[Close]

BLAST of Bhi05G000415 vs. TrEMBL
Match: tr|W9SG61|W9SG61_9ROSA (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B OS=Morus notabilis OX=981085 GN=L484_023414 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-12
Identity = 40/71 (56.34%), Postives = 53/71 (74.65%), Query Frame = 0


Query: 1   MMRLKPSLAKKLNPKGYSPIHLALQNHQIEIVLRLI--DVDLDLISIQGREGLSPLHVAS 60
           MMRL PS AK+LNP G+SP+ LALQN +I+ VLRL+  D D DL+ +QGREG+SPLH  +
Sbjct: 55  MMRLNPSFAKRLNPDGFSPLQLALQNDRIQTVLRLLAMDRDGDLVRVQGREGMSPLHYVA 114

Query: 61  FGGKEEVLAKF 70
             G  ++L+ F
Sbjct: 115 KHGNNQLLSAF 125

[Close]

BLAST of Bhi05G000415 vs. TrEMBL
Match: tr|G7LIB8|G7LIB8_MEDTR (Ankyrin repeat protein OS=Medicago truncatula OX=3880 GN=25501097 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.1e-12
Identity = 37/69 (53.62%), Postives = 53/69 (76.81%), Query Frame = 0


Query: 1  MMRLKPSLAKKLNPKGYSPIHLALQNHQIEIVLRLIDVDLDLISIQGREGLSPLHVASFG 60
          +M LKPS A KLNP+G+SPIHLA+QN Q ++V R + ++ DL+ + GR+GL+PLH AS  
Sbjct: 10 IMTLKPSFALKLNPQGFSPIHLAMQNDQKQMVYRFVKINKDLVRVIGRDGLTPLHFASQI 69

Query: 61 GKEEVLAKF 70
          G+ ++LA F
Sbjct: 70 GEVDLLAHF 78

[Close]

BLAST of Bhi05G000415 vs. NCBI nr
Match: XP_023553682.1 (ankyrin repeat-containing protein BDA1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 111.7 bits (278), Expect = 1.1e-21
Identity = 52/69 (75.36%), Postives = 63/69 (91.30%), Query Frame = 0


Query: 1   MMRLKPSLAKKLNPKGYSPIHLALQNHQIEIVLRLIDVDLDLISIQGREGLSPLHVASFG 60
           +MRLKPSLAKKLNP GYSPIHLALQN+Q + VLRLID+D DL+SIQGREGL+PLH+A+ G
Sbjct: 56  IMRLKPSLAKKLNPDGYSPIHLALQNNQTKTVLRLIDIDRDLVSIQGREGLTPLHIAASG 115

Query: 61  GKEEVLAKF 70
           G +++LAKF
Sbjct: 116 GMDDILAKF 124

[Close]

BLAST of Bhi05G000415 vs. NCBI nr
Match: XP_022971840.1 (ankyrin repeat-containing protein BDA1-like [Cucurbita maxima])

HSP 1 Score: 110.2 bits (274), Expect = 3.3e-21
Identity = 50/69 (72.46%), Postives = 63/69 (91.30%), Query Frame = 0


Query: 1   MMRLKPSLAKKLNPKGYSPIHLALQNHQIEIVLRLIDVDLDLISIQGREGLSPLHVASFG 60
           +MRLKPSLAKKLNP+GYSPIHLALQN+Q + VLRL+D+D DL+ IQGREGL+PLH+A+ G
Sbjct: 56  IMRLKPSLAKKLNPEGYSPIHLALQNNQTKTVLRLVDIDRDLVCIQGREGLTPLHIAASG 115

Query: 61  GKEEVLAKF 70
           G +++LAKF
Sbjct: 116 GMDDILAKF 124

[Close]

BLAST of Bhi05G000415 vs. NCBI nr
Match: XP_022971942.1 (ankyrin repeat-containing protein BDA1-like [Cucurbita maxima])

HSP 1 Score: 109.8 bits (273), Expect = 4.3e-21
Identity = 52/69 (75.36%), Postives = 62/69 (89.86%), Query Frame = 0


Query: 1   MMRLKPSLAKKLNPKGYSPIHLALQNHQIEIVLRLIDVDLDLISIQGREGLSPLHVASFG 60
           +MRLKPSLAKKLNP GYSPIHLALQN+Q + VLRL+D D DLISIQGREGL+PLH+A+ G
Sbjct: 56  IMRLKPSLAKKLNPDGYSPIHLALQNNQTKTVLRLVDSDRDLISIQGREGLTPLHIAASG 115

Query: 61  GKEEVLAKF 70
           G +++LAKF
Sbjct: 116 GMDDILAKF 124

[Close]

BLAST of Bhi05G000415 vs. NCBI nr
Match: XP_022971878.1 (ankyrin repeat-containing protein BDA1-like [Cucurbita maxima])

HSP 1 Score: 109.0 bits (271), Expect = 7.3e-21
Identity = 49/69 (71.01%), Postives = 63/69 (91.30%), Query Frame = 0


Query: 1   MMRLKPSLAKKLNPKGYSPIHLALQNHQIEIVLRLIDVDLDLISIQGREGLSPLHVASFG 60
           +MRLKPSLAKKLNP+GYSPIHLALQN+Q + VLRL+D+D DL+ IQGR+GL+PLH+A+ G
Sbjct: 56  IMRLKPSLAKKLNPEGYSPIHLALQNNQTKTVLRLVDIDRDLVCIQGRDGLTPLHIAASG 115

Query: 61  GKEEVLAKF 70
           G +++LAKF
Sbjct: 116 GMDDILAKF 124

[Close]

BLAST of Bhi05G000415 vs. NCBI nr
Match: XP_022971877.1 (ankyrin repeat-containing protein BDA1-like [Cucurbita maxima])

HSP 1 Score: 109.0 bits (271), Expect = 7.3e-21
Identity = 49/69 (71.01%), Postives = 63/69 (91.30%), Query Frame = 0


Query: 1   MMRLKPSLAKKLNPKGYSPIHLALQNHQIEIVLRLIDVDLDLISIQGREGLSPLHVASFG 60
           +MRLKPSLAKKLNP+GYSPIHLALQN+Q + VLRL+D+D DL+ IQGR+GL+PLH+A+ G
Sbjct: 56  IMRLKPSLAKKLNPEGYSPIHLALQNNQTKTVLRLVDIDRDLVCIQGRDGLTPLHIAASG 115

Query: 61  GKEEVLAKF 70
           G +++LAKF
Sbjct: 116 GMDDILAKF 124

The following BLAST results are available for this feature:

BLAST of Bhi05G000415 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi05G000415 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G11000.1	4.7e-06	66.67	Ankyrin repeat family protein	[more]

BLAST of Bhi05G000415 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|W9S5M4\|W9S5M4_9ROSA	4.8e-13	55.07	Ankyrin repeat-containing protein OS=Morus notabilis OX=981085 GN=L484_023411 PE...	[more]
tr\|G7LJ91\|G7LJ91_MEDTR	1.1e-12	53.62	Ankyrin repeat protein OS=Medicago truncatula OX=3880 GN=11441519 PE=4 SV=2	[more]
tr\|W9SDK9\|W9SDK9_9ROSA	1.1e-12	55.22	Ankyrin repeat-containing protein OS=Morus notabilis OX=981085 GN=L484_023413 PE...	[more]
tr\|W9SG61\|W9SG61_9ROSA	1.1e-12	56.34	Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B OS=Mo...	[more]
tr\|G7LIB8\|G7LIB8_MEDTR	3.1e-12	53.62	Ankyrin repeat protein OS=Medicago truncatula OX=3880 GN=25501097 PE=4 SV=1	[more]

BLAST of Bhi05G000415 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023553682.1	1.1e-21	75.36	ankyrin repeat-containing protein BDA1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022971840.1	3.3e-21	72.46	ankyrin repeat-containing protein BDA1-like [Cucurbita maxima]	[more]
XP_022971942.1	4.3e-21	75.36	ankyrin repeat-containing protein BDA1-like [Cucurbita maxima]	[more]
XP_022971878.1	7.3e-21	71.01	ankyrin repeat-containing protein BDA1-like [Cucurbita maxima]	[more]
XP_022971877.1	7.3e-21	71.01	ankyrin repeat-containing protein BDA1-like [Cucurbita maxima]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR002110	Ankyrin_rpt
IPR020683	Ankyrin_rpt-contain_dom
IPR036770	Ankyrin_rpt-contain_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi05M000415	Bhi05M000415	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	G3DSA:1.25.40.20		coord: 1..71 e-value: 5.6E-9 score: 37.5
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	SSF48403	Ankyrin repeat	coord: 8..70
None	No IPR available	PANTHER	PTHR24128	FAMILY NOT NAMED	coord: 1..70
None	No IPR available	PANTHER	PTHR24128:SF24	ANKYRIN REPEAT FAMILY PROTEIN-RELATED	coord: 1..70
IPR020683	Ankyrin repeat-containing domain	PROSITE	PS50297	ANK_REP_REGION	coord: 15..77 score: 13.602
IPR020683	Ankyrin repeat-containing domain	CDD	cd00204	ANK	coord: 13..66 e-value: 1.28697E-8 score: 46.2226
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 15..42 score: 8.523

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi05G000415	Cucumber (Gy14) v1	cgywgoB625
Bhi05G000415	Cucumber (Gy14) v2	cgybwgoB292
Bhi05G000415	Cucurbita maxima (Rimu)	cmawgoB0646
Bhi05G000415	Cucurbita maxima (Rimu)	cmawgoB0737
Bhi05G000415	Cucurbita moschata (Rifu)	cmowgoB0645
Bhi05G000415	Cucurbita moschata (Rifu)	cmowgoB0728
Bhi05G000415	Cucurbita pepo (Zucchini)	cpewgoB0320
Bhi05G000415	Cucurbita pepo (Zucchini)	cpewgoB0930
Bhi05G000415	Wild cucumber (PI 183967)	cpiwgoB305
Bhi05G000415	Cucumber (Chinese Long) v3	cucwgoB307
Bhi05G000415	Cucumber (Chinese Long) v2	cuwgoB302
Bhi05G000415	Bottle gourd (USVL1VR-Ls)	lsiwgoB460
Bhi05G000415	Melon (DHL92) v3.6.1	medwgoB409
Bhi05G000415	Melon (DHL92) v3.5.1	mewgoB407
Bhi05G000415	Watermelon (Charleston Gray)	wcgwgoB034
Bhi05G000415	Watermelon (97103) v2	wgowmbB264
Bhi05G000415	Watermelon (97103) v1	wgowmB242
Bhi05G000415	Silver-seed gourd	carwgoB0268
Bhi05G000415	Silver-seed gourd	carwgoB0918