Bhi05G000381 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi05G000381
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	LOW QUALITY PROTEIN: uncharacterized protein LOC107869062
Location	chr5 : 13521282 .. 13522163 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTATCAGAGCCCACGTCTTAGAACCTTGGTGAATACCCATGCAACCCATTCACCTAGTAACTTGATGGCATCTGAGGAAGGATATAGCTCGTCGGTTGAATAGGTTGCCGAAGATCCAACAACTCATTCACGTAAAGCACAACTATCTTCATCCAAGCACGAGAAATCCAAGGCCCATGATGTGAGACAACCTGTGGACACTTGCCTGGCCAACCTGGAGCAAAGCTTGGAGGAGATACATGCGTTGGTTGGTAGGTTGAGTGACGACTATGAGGGCTTAGTCCAAAAGAATGTCGAGATCACTGTTGCTGCAAAAGAGATGATCATGGAGCTTGGACGATCATTCAGTAGGGAGGTAAGTTCTCTAACTAATGATGTTGAAACCTACGTAAGTTTGTGGAGGGTGTGCTCTATGAGCTTCGTAAATAACTCGACGACATACGTACTGAATGTCGTAACAATTGTAGAGCTAGTAATCAATATGCATCTACTAGGTCACCATCTGCTGCGACCGTGCATGGCATCCATGGATTGAAGGTGCCAAAACCCGACACATATGATGGCACATGTAGTTCCACAGTGGTGAAAAACTTCATCTTCGGCCTAGAACAATATTTCGAAGCCCTTGGTGTCATCGAGGATGGTGCTAAGATTGCGAATGCACCAAACTTCCTACTTGCAATAGCCCAATTGTGGTGGCATAGGAAACATGTCGAAAGGGAACGTGGCCTATGCACTTTACAACATGGGAGCAATTCAAAGCAGAGCTCCAAAAGCATTTTGTTCCCCACAATGCTAATATGGAGGCACGAGGAAAGCTTTGAAGGCTTAGATAGAATGCAAGTATCTCAGAGTATATCAAGGCATTCACGACCCTAA

mRNA sequence

ATGGTTGCCGAAGATCCAACAACTCATTCACGTAAAGCACAACTATCTTCATCCAAGCACGAGAAATCCAAGGCCCATGATGTGAGACAACCTGTGGACACTTGCCTGGCCAACCTGGAGCAAAGCTTGGAGGAGATACATGCGTTGGTTGGTAGGTTGAGTGACGACTATGAGGGCTTAGTCCAAAAGAATGTCGAGATCACTGTTGCTGCAAAAGAGATGATCATGGAGCTTGGACGATCATTCAGTAGGGAGGTGCCAAAACCCGACACATATGATGGCACATGTAGTTCCACAGTGGTGAAAAACTTCATCTTCGGCCTAGAACAATATTTCGAAGCCCTTGGTGTCATCGAGGATGGTGCTAAGATTGCGAATGCACCAAACTTCCTACTTGCAATAGCCCAATTGTGGTGGCATAGGAAACATGTCGAAAGGGAACGTGGCCTATGCACTTTACAACATGGGAGCAATTCAAAGCAGAGCTCCAAAAGCATTTTGTTCCCCACAATGCTAATATGGAGGCACGAGGAAAGCTTTGAAGGCTTAGATAGAATGCAAGTATCTCAGAGTATATCAAGGCATTCACGACCCTAA

Coding sequence (CDS)

ATGGTTGCCGAAGATCCAACAACTCATTCACGTAAAGCACAACTATCTTCATCCAAGCACGAGAAATCCAAGGCCCATGATGTGAGACAACCTGTGGACACTTGCCTGGCCAACCTGGAGCAAAGCTTGGAGGAGATACATGCGTTGGTTGGTAGGTTGAGTGACGACTATGAGGGCTTAGTCCAAAAGAATGTCGAGATCACTGTTGCTGCAAAAGAGATGATCATGGAGCTTGGACGATCATTCAGTAGGGAGGTGCCAAAACCCGACACATATGATGGCACATGTAGTTCCACAGTGGTGAAAAACTTCATCTTCGGCCTAGAACAATATTTCGAAGCCCTTGGTGTCATCGAGGATGGTGCTAAGATTGCGAATGCACCAAACTTCCTACTTGCAATAGCCCAATTGTGGTGGCATAGGAAACATGTCGAAAGGGAACGTGGCCTATGCACTTTACAACATGGGAGCAATTCAAAGCAGAGCTCCAAAAGCATTTTGTTCCCCACAATGCTAATATGGAGGCACGAGGAAAGCTTTGAAGGCTTAGATAGAATGCAAGTATCTCAGAGTATATCAAGGCATTCACGACCCTAA

Protein sequence

MVAEDPTTHSRKAQLSSSKHEKSKAHDVRQPVDTCLANLEQSLEEIHALVGRLSDDYEGLVQKNVEITVAAKEMIMELGRSFSREVPKPDTYDGTCSSTVVKNFIFGLEQYFEALGVIEDGAKIANAPNFLLAIAQLWWHRKHVERERGLCTLQHGSNSKQSSKSILFPTMLIWRHEESFEGLDRMQVSQSISRHSRP

Homology

[Close]

BLAST of Bhi05G000381 vs. TrEMBL
Match: tr|A0A1S3BG92|A0A1S3BG92_CUCME (uncharacterized protein LOC103489499 OS=Cucumis melo OX=3656 GN=LOC103489499 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.5e-26
Identity = 78/210 (37.14%), Postives = 102/210 (48.57%), Query Frame = 0


Query: 2   VAEDPTTHSRKAQLSSSKHEKSKAHDVRQPVDTCLANLEQSLEEIHALVGRLSDDYEGLV 61
           V E P T  RK Q S ++  KSK   VR+ VDT L NLEQ +E++   VGRLS+++E LV
Sbjct: 14  VIEGPVTRGRKEQHSPTRRSKSKGPAVREHVDTRLTNLEQGMEDVQLAVGRLSENFEELV 73

Query: 62  QKNVEITVAAKEMIMELGRSFSRE------------------------------------ 121
            +N EIT  AKEMI ++GR+F +E                                    
Sbjct: 74  LENAEITSVAKEMIEDMGRTFQKELKELASTVTTLKAFVEGELHNLHTKSISFETRLDAL 133

Query: 122 -----------------------------VPKPDTYDGTCSSTVVKNFIFGLEQYFEALG 147
                                        VPKPD Y+G  +STVV NF+F LE+YF ALG
Sbjct: 134 CVECRSKHLGSNAPSMSTHPTTSGTSNIKVPKPDVYNGVRNSTVVDNFLFSLERYFVALG 193

[Close]

BLAST of Bhi05G000381 vs. TrEMBL
Match: tr|A0A2U1NEZ9|A0A2U1NEZ9_ARTAN (Uncharacterized protein OS=Artemisia annua OX=35608 GN=CTI12_AA274570 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.6e-20
Identity = 62/160 (38.75%), Postives = 95/160 (59.38%), Query Frame = 0


Query: 12  KAQLSSSKHEKSKAHD-VRQPVDTCLANLEQSLEEIHALVGRLSDDYEGLVQKNVEITVA 71
           KA + + K E  K  D + + + +    LE  + ++H  + +++ + +   +K+ +   +
Sbjct: 13  KALVRNVKDEAKKEIDKMSEDLLSARKFLEDEVFKMHEKIDKVAKECQTHQKKSNDGGAS 72

Query: 72  AKEMIMELGRSFS-REVPKPDTYDGTCSSTVVKNFIFGLEQYFEALGVIEDGAKIANAPN 131
             +     G SFS  +VPKPD Y+GT ++T+V+NF+FGLEQYFEA+GV ED A+I+NAP 
Sbjct: 73  GGQ-----GTSFSPLKVPKPDMYNGTRNATLVENFLFGLEQYFEAMGVDEDAARISNAPT 132

Query: 132 FLLAIAQLWWHRKHVERERGLCTLQHGSNSKQSSKSILFP 170
           FL   AQLWW RKH ERE+G+C L      K   +    P
Sbjct: 133 FLRESAQLWWRRKHHEREKGICDLNTWDQFKTELRKQFVP 167

[Close]

BLAST of Bhi05G000381 vs. TrEMBL
Match: tr|A0A2U1PL38|A0A2U1PL38_ARTAN (Uncharacterized protein OS=Artemisia annua OX=35608 GN=CTI12_AA095360 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.6e-20
Identity = 62/160 (38.75%), Postives = 95/160 (59.38%), Query Frame = 0


Query: 12  KAQLSSSKHEKSKAHD-VRQPVDTCLANLEQSLEEIHALVGRLSDDYEGLVQKNVEITVA 71
           KA + + K E  K  D + + + +    LE  + ++H  + +++ + +   +K+ +   +
Sbjct: 99  KALVRNVKDEAKKEIDKMSEDLLSARKFLEDEVFKMHEKIDKVAKECQTHQKKSNDGGAS 158

Query: 72  AKEMIMELGRSFS-REVPKPDTYDGTCSSTVVKNFIFGLEQYFEALGVIEDGAKIANAPN 131
             +     G SFS  +VPKPD Y+GT ++T+V+NF+FGLEQYFEA+GV ED A+I+NAP 
Sbjct: 159 GGQ-----GTSFSPLKVPKPDMYNGTRNATLVENFLFGLEQYFEAMGVDEDAARISNAPT 218

Query: 132 FLLAIAQLWWHRKHVERERGLCTLQHGSNSKQSSKSILFP 170
           FL   AQLWW RKH ERE+G+C L      K   +    P
Sbjct: 219 FLRESAQLWWRRKHHEREKGICDLNTWDQFKTELRKQFVP 253

[Close]

BLAST of Bhi05G000381 vs. TrEMBL
Match: tr|A0A2U1LHQ1|A0A2U1LHQ1_ARTAN (Uncharacterized protein OS=Artemisia annua OX=35608 GN=CTI12_AA489850 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 4.0e-19
Identity = 48/76 (63.16%), Postives = 60/76 (78.95%), Query Frame = 0


Query: 79  GRSFS-REVPKPDTYDGTCSSTVVKNFIFGLEQYFEALGVIEDGAKIANAPNFLLAIAQL 138
           G SFS  +V KPD Y+GT ++T+V+NF+FGLEQYFEA+GV ED A+I+NAP FL    QL
Sbjct: 47  GTSFSPLKVSKPDMYNGTRNATLVENFLFGLEQYFEAMGVDEDAARISNAPAFLRESVQL 106

Query: 139 WWHRKHVERERGLCTL 154
           WW RKH ERE+G+C L
Sbjct: 107 WWRRKHHEREKGICDL 122

[Close]

BLAST of Bhi05G000381 vs. TrEMBL
Match: tr|A0A1S3CE17|A0A1S3CE17_CUCME (uncharacterized protein LOC103499392 OS=Cucumis melo OX=3656 GN=LOC103499392 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.6e-18
Identity = 59/169 (34.91%), Postives = 80/169 (47.34%), Query Frame = 0


Query: 43  LEEIHALVGRLSDDYEGLVQKNVEITVAAKEMIMELGRSFSRE----------------- 102
           +E++   VGRLS+++E LVQ+N EIT  AKEMI ++GR+F  E                 
Sbjct: 1   MEDVQLAVGRLSENFEELVQENAEITSVAKEMIEDMGRTFQEELKELASTVTTLKAFVEG 60

Query: 103 ------------------------------------------------VPKPDTYDGTCS 147
                                                           VPKPD Y+G  +
Sbjct: 61  ELHNLHTKSISFETRLDALCVECRSKHLGSNAPSTSTHPTTSGTSNIKVPKPDVYNGVRN 120

[Close]

BLAST of Bhi05G000381 vs. NCBI nr
Match: XP_008446938.1 (PREDICTED: uncharacterized protein LOC103489499 [Cucumis melo])

HSP 1 Score: 128.6 bits (322), Expect = 2.3e-26
Identity = 78/210 (37.14%), Postives = 102/210 (48.57%), Query Frame = 0


Query: 2   VAEDPTTHSRKAQLSSSKHEKSKAHDVRQPVDTCLANLEQSLEEIHALVGRLSDDYEGLV 61
           V E P T  RK Q S ++  KSK   VR+ VDT L NLEQ +E++   VGRLS+++E LV
Sbjct: 14  VIEGPVTRGRKEQHSPTRRSKSKGPAVREHVDTRLTNLEQGMEDVQLAVGRLSENFEELV 73

Query: 62  QKNVEITVAAKEMIMELGRSFSRE------------------------------------ 121
            +N EIT  AKEMI ++GR+F +E                                    
Sbjct: 74  LENAEITSVAKEMIEDMGRTFQKELKELASTVTTLKAFVEGELHNLHTKSISFETRLDAL 133

Query: 122 -----------------------------VPKPDTYDGTCSSTVVKNFIFGLEQYFEALG 147
                                        VPKPD Y+G  +STVV NF+F LE+YF ALG
Sbjct: 134 CVECRSKHLGSNAPSMSTHPTTSGTSNIKVPKPDVYNGVRNSTVVDNFLFSLERYFVALG 193

[Close]

BLAST of Bhi05G000381 vs. NCBI nr
Match: PWA72092.1 (hypothetical protein CTI12_AA274570 [Artemisia annua])

HSP 1 Score: 108.6 bits (270), Expect = 2.4e-20
Identity = 62/160 (38.75%), Postives = 95/160 (59.38%), Query Frame = 0


Query: 12  KAQLSSSKHEKSKAHD-VRQPVDTCLANLEQSLEEIHALVGRLSDDYEGLVQKNVEITVA 71
           KA + + K E  K  D + + + +    LE  + ++H  + +++ + +   +K+ +   +
Sbjct: 13  KALVRNVKDEAKKEIDKMSEDLLSARKFLEDEVFKMHEKIDKVAKECQTHQKKSNDGGAS 72

Query: 72  AKEMIMELGRSFS-REVPKPDTYDGTCSSTVVKNFIFGLEQYFEALGVIEDGAKIANAPN 131
             +     G SFS  +VPKPD Y+GT ++T+V+NF+FGLEQYFEA+GV ED A+I+NAP 
Sbjct: 73  GGQ-----GTSFSPLKVPKPDMYNGTRNATLVENFLFGLEQYFEAMGVDEDAARISNAPT 132

Query: 132 FLLAIAQLWWHRKHVERERGLCTLQHGSNSKQSSKSILFP 170
           FL   AQLWW RKH ERE+G+C L      K   +    P
Sbjct: 133 FLRESAQLWWRRKHHEREKGICDLNTWDQFKTELRKQFVP 167

[Close]

BLAST of Bhi05G000381 vs. NCBI nr
Match: PWA86449.1 (hypothetical protein CTI12_AA095360 [Artemisia annua])

HSP 1 Score: 108.6 bits (270), Expect = 2.4e-20
Identity = 62/160 (38.75%), Postives = 95/160 (59.38%), Query Frame = 0


Query: 12  KAQLSSSKHEKSKAHD-VRQPVDTCLANLEQSLEEIHALVGRLSDDYEGLVQKNVEITVA 71
           KA + + K E  K  D + + + +    LE  + ++H  + +++ + +   +K+ +   +
Sbjct: 99  KALVRNVKDEAKKEIDKMSEDLLSARKFLEDEVFKMHEKIDKVAKECQTHQKKSNDGGAS 158

Query: 72  AKEMIMELGRSFS-REVPKPDTYDGTCSSTVVKNFIFGLEQYFEALGVIEDGAKIANAPN 131
             +     G SFS  +VPKPD Y+GT ++T+V+NF+FGLEQYFEA+GV ED A+I+NAP 
Sbjct: 159 GGQ-----GTSFSPLKVPKPDMYNGTRNATLVENFLFGLEQYFEAMGVDEDAARISNAPT 218

Query: 132 FLLAIAQLWWHRKHVERERGLCTLQHGSNSKQSSKSILFP 170
           FL   AQLWW RKH ERE+G+C L      K   +    P
Sbjct: 219 FLRESAQLWWRRKHHEREKGICDLNTWDQFKTELRKQFVP 253

[Close]

BLAST of Bhi05G000381 vs. NCBI nr
Match: XP_015389228.1 (uncharacterized protein LOC107178484 [Citrus sinensis])

HSP 1 Score: 104.4 bits (259), Expect = 4.6e-19
Identity = 48/108 (44.44%), Postives = 72/108 (66.67%), Query Frame = 0


Query: 85  EVPKPDTYDGTCSSTVVKNFIFGLEQYFEALGVIEDGAKIANAPNFLLAIAQLWWHRKHV 144
           +VPKPDTYDGT ++T+V NF+FGL+QYF+A+GV ++ +K+  AP +L   AQLWW RKH 
Sbjct: 155 DVPKPDTYDGTRNATIVDNFLFGLDQYFDAMGVRDEASKVGTAPTYLRGAAQLWWRRKHG 214

Query: 145 ERERGLCTLQHGSNSKQSSKSILFPTMLIWRHEESFEGLDRMQVSQSI 193
           E  +G+CT+   ++ KQ  +    P+      +E+   L R++ S SI
Sbjct: 215 EMGKGICTIDTWADFKQELRKQFAPSN---AEKEARARLRRLKQSGSI 259

[Close]

BLAST of Bhi05G000381 vs. NCBI nr
Match: XP_006493831.1 (uncharacterized protein LOC102625991 [Citrus sinensis])

HSP 1 Score: 104.0 bits (258), Expect = 6.0e-19
Identity = 48/108 (44.44%), Postives = 72/108 (66.67%), Query Frame = 0


Query: 85  EVPKPDTYDGTCSSTVVKNFIFGLEQYFEALGVIEDGAKIANAPNFLLAIAQLWWHRKHV 144
           +VPKPDTYDGT ++T+V NF+FGL+QYF+A+GV ++ +K+  AP +L   AQLWW RKH 
Sbjct: 155 DVPKPDTYDGTRNATIVDNFLFGLDQYFDAMGVRDEASKVGTAPTYLRGAAQLWWRRKHG 214

Query: 145 ERERGLCTLQHGSNSKQSSKSILFPTMLIWRHEESFEGLDRMQVSQSI 193
           E  +G+CT+   ++ KQ  +    P+      +E+   L R++ S SI
Sbjct: 215 EMGKGICTIDTWADFKQELRKQFAPSN---AEKEARVRLRRLKQSGSI 259

The following BLAST results are available for this feature:

BLAST of Bhi05G000381 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi05G000381 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi05G000381 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BG92\|A0A1S3BG92_CUCME	1.5e-26	37.14	uncharacterized protein LOC103489499 OS=Cucumis melo OX=3656 GN=LOC103489499 PE=...	[more]
tr\|A0A2U1NEZ9\|A0A2U1NEZ9_ARTAN	1.6e-20	38.75	Uncharacterized protein OS=Artemisia annua OX=35608 GN=CTI12_AA274570 PE=4 SV=1	[more]
tr\|A0A2U1PL38\|A0A2U1PL38_ARTAN	1.6e-20	38.75	Uncharacterized protein OS=Artemisia annua OX=35608 GN=CTI12_AA095360 PE=4 SV=1	[more]
tr\|A0A2U1LHQ1\|A0A2U1LHQ1_ARTAN	4.0e-19	63.16	Uncharacterized protein OS=Artemisia annua OX=35608 GN=CTI12_AA489850 PE=4 SV=1	[more]
tr\|A0A1S3CE17\|A0A1S3CE17_CUCME	2.6e-18	34.91	uncharacterized protein LOC103499392 OS=Cucumis melo OX=3656 GN=LOC103499392 PE=...	[more]

BLAST of Bhi05G000381 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446938.1	2.3e-26	37.14	PREDICTED: uncharacterized protein LOC103489499 [Cucumis melo]	[more]
PWA72092.1	2.4e-20	38.75	hypothetical protein CTI12_AA274570 [Artemisia annua]	[more]
PWA86449.1	2.4e-20	38.75	hypothetical protein CTI12_AA095360 [Artemisia annua]	[more]
XP_015389228.1	4.6e-19	44.44	uncharacterized protein LOC107178484 [Citrus sinensis]	[more]
XP_006493831.1	6.0e-19	44.44	uncharacterized protein LOC102625991 [Citrus sinensis]	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi05M000381	Bhi05M000381	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 36..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..29

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi05G000381	Cucumber (Gy14) v1	cgywgoB625
Bhi05G000381	Cucumber (Gy14) v1	cgywgoB626
Bhi05G000381	Cucumber (Gy14) v1	cgywgoB651
Bhi05G000381	Cucumber (Gy14) v2	cgybwgoB292
Bhi05G000381	Cucumber (Gy14) v2	cgybwgoB297
Bhi05G000381	Cucurbita maxima (Rimu)	cmawgoB0731
Bhi05G000381	Cucurbita moschata (Rifu)	cmowgoB0726
Bhi05G000381	Cucurbita moschata (Rifu)	cmowgoB0728
Bhi05G000381	Cucurbita pepo (Zucchini)	cpewgoB0930
Bhi05G000381	Cucurbita pepo (Zucchini)	cpewgoB0937
Bhi05G000381	Wild cucumber (PI 183967)	cpiwgoB305
Bhi05G000381	Wild cucumber (PI 183967)	cpiwgoB310
Bhi05G000381	Cucumber (Chinese Long) v3	cucwgoB307
Bhi05G000381	Cucumber (Chinese Long) v3	cucwgoB312
Bhi05G000381	Cucumber (Chinese Long) v3	cucwgoB315
Bhi05G000381	Cucumber (Chinese Long) v2	cuwgoB302
Bhi05G000381	Cucumber (Chinese Long) v2	cuwgoB307
Bhi05G000381	Bottle gourd (USVL1VR-Ls)	lsiwgoB460
Bhi05G000381	Melon (DHL92) v3.6.1	medwgoB403
Bhi05G000381	Melon (DHL92) v3.5.1	mewgoB402
Bhi05G000381	Watermelon (Charleston Gray)	wcgwgoB034
Bhi05G000381	Watermelon (Charleston Gray)	wcgwgoB043
Bhi05G000381	Watermelon (Charleston Gray)	wcgwgoB114
Bhi05G000381	Watermelon (97103) v2	wgowmbB239
Bhi05G000381	Watermelon (97103) v2	wgowmbB264
Bhi05G000381	Watermelon (97103) v2	wgowmbB272
Bhi05G000381	Watermelon (97103) v1	wgowmB242
Bhi05G000381	Watermelon (97103) v1	wgowmB256
Bhi05G000381	Watermelon (97103) v1	wgowmB263
Bhi05G000381	Silver-seed gourd	carwgoB0917
Bhi05G000381	Silver-seed gourd	carwgoB0918