Bhi05G000244 (gene) Wax gourd

Overview
NameBhi05G000244
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionMitochondrial GTPase 1
Locationchr5 : 7010430 .. 7010756 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCTTCATATGGTTAAGCAAGGACACTCGCTGCAACTACAAGCAATGAGTCTTCTTCATATTCAGCTCTCAGGGCTCTGTCTCCCCACCGCTCCTGCAATCTTGCCCCACCTTTTTTACTGCCGAAGCGGACCATCCCCACCATCTCTCTCGCCTTCAACTTCTCTTTCTTCGTCGCACCCCACAATTCATTTAACACACATTCAAATCGCCTTCTCATTTGTACAAAATATTTGGGTGCTATCTTTTTCTTTAGTTTCATTCTCTTATACTGCTTACGCCTTCCACAATCGTTCTTGTTTTTTTTATAGAACTTATTTTTAG

mRNA sequence

ATGGGTCTTCATATGGTTAAGCAAGGACACTCGCTGCAACTACAAGCAATGAGTCTTCTTCATATTCAGCTCTCAGGGCTCTGTCTCCCCACCGCTCCTGCAATCTTGCCCCACCTTTTTTACTGCCGAAGCGGACCATCCCCACCATCTCTCTCGCCTTCAACTTCTCTTTCTTCGTCGCACCCCACAATTCATTTAACACACATTCAAATCGCCTTCTCATTTGTACAAAATATTTGGGTGCTATCTTTTTCTTTAGTTTCATTCTCTTATACTGCTTACGCCTTCCACAATCGTTCTTGTTTTTTTTATAGAACTTATTTTTAG

Coding sequence (CDS)

ATGGGTCTTCATATGGTTAAGCAAGGACACTCGCTGCAACTACAAGCAATGAGTCTTCTTCATATTCAGCTCTCAGGGCTCTGTCTCCCCACCGCTCCTGCAATCTTGCCCCACCTTTTTTACTGCCGAAGCGGACCATCCCCACCATCTCTCTCGCCTTCAACTTCTCTTTCTTCGTCGCACCCCACAATTCATTTAACACACATTCAAATCGCCTTCTCATTTGTACAAAATATTTGGGTGCTATCTTTTTCTTTAGTTTCATTCTCTTATACTGCTTACGCCTTCCACAATCGTTCTTGTTTTTTTTATAGAACTTATTTTTAG

Protein sequence

MGLHMVKQGHSLQLQAMSLLHIQLSGLCLPTAPAILPHLFYCRSGPSPPSLSPSTSLSSSHPTIHLTHIQIAFSFVQNIWVLSFSLVSFSYTAYAFHNRSCFFYRTYF
Homology
[Close]
BLAST of Bhi05G000244 vs. TrEMBL
Match: tr|A0A0A0KMJ7|A0A0A0KMJ7_CUCSA (Mitochondrial GTPase 1 OS=Cucumis sativus OX=3659 GN=Csa_5G308800 PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 9.5e-07
Identity = 30/47 (63.83%), Postives = 34/47 (72.34%), Query Frame = 0 

Query: 20 LHIQLSGLCLPTAPAILPHLFYCRSGPSPPSLSPSTSLSSSHPTIHL 67
          LHI  SG  LP    I P LF+CRSGPSPPSL+PS S+SS HPTI +
Sbjct: 3  LHIHPSGFFLPNTRTIYPQLFFCRSGPSPPSLAPSASVSSPHPTIQI 49

[Close]
BLAST of Bhi05G000244 vs. TrEMBL
Match: tr|A0A1S3CIW2|A0A1S3CIW2_CUCME (DAR GTPase 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501342 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.2e-06
Identity = 30/47 (63.83%), Postives = 34/47 (72.34%), Query Frame = 0 

Query: 20 LHIQLSGLCLPTAPAILPHLFYCRSGPSPPSLSPSTSLSSSHPTIHL 67
          LHI  SG  LP    I PHL +CRSGPSPPSL+PS S+SS HPTI +
Sbjct: 3  LHIHPSGFFLPNTRTISPHLSFCRSGPSPPSLAPSASVSSPHPTIQI 49

[Close]
BLAST of Bhi05G000244 vs. NCBI nr
Match: XP_023554315.1 (DAR GTPase 3, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 64.3 bits (155), Expect = 2.9e-07
Identity = 32/47 (68.09%), Postives = 35/47 (74.47%), Query Frame = 0 

Query: 20 LHIQLSGLCLPTAPAILPHLFYCRSGPSPPSLSPSTSLSSSHPTIHL 67
          LH+QLSGLCLPT  AI    FYCRSGPSP SL+PS S S  HPTI +
Sbjct: 3  LHVQLSGLCLPTTRAIPTRHFYCRSGPSPASLTPSASASLPHPTIQI 49

[Close]
BLAST of Bhi05G000244 vs. NCBI nr
Match: XP_022967431.1 (DAR GTPase 3, chloroplastic [Cucurbita maxima])

HSP 1 Score: 62.4 bits (150), Expect = 1.1e-06
Identity = 31/47 (65.96%), Postives = 34/47 (72.34%), Query Frame = 0 

Query: 20 LHIQLSGLCLPTAPAILPHLFYCRSGPSPPSLSPSTSLSSSHPTIHL 67
          LH+QLSGLCLPT  AI    FYCRSGPSP SL+PS S S  HP I +
Sbjct: 3  LHVQLSGLCLPTTRAIPTRHFYCRSGPSPASLTPSASASLPHPAIQI 49

[Close]
BLAST of Bhi05G000244 vs. NCBI nr
Match: KGN50875.1 (hypothetical protein Csa_5G308800 [Cucumis sativus])

HSP 1 Score: 62.0 bits (149), Expect = 1.4e-06
Identity = 30/47 (63.83%), Postives = 34/47 (72.34%), Query Frame = 0 

Query: 20 LHIQLSGLCLPTAPAILPHLFYCRSGPSPPSLSPSTSLSSSHPTIHL 67
          LHI  SG  LP    I P LF+CRSGPSPPSL+PS S+SS HPTI +
Sbjct: 3  LHIHPSGFFLPNTRTIYPQLFFCRSGPSPPSLAPSASVSSPHPTIQI 49

[Close]
BLAST of Bhi05G000244 vs. NCBI nr
Match: XP_011655122.1 (PREDICTED: mitochondrial ribosome-associated GTPase 1 [Cucumis sativus])

HSP 1 Score: 62.0 bits (149), Expect = 1.4e-06
Identity = 30/47 (63.83%), Postives = 34/47 (72.34%), Query Frame = 0 

Query: 20 LHIQLSGLCLPTAPAILPHLFYCRSGPSPPSLSPSTSLSSSHPTIHL 67
          LHI  SG  LP    I P LF+CRSGPSPPSL+PS S+SS HPTI +
Sbjct: 3  LHIHPSGFFLPNTRTIYPQLFFCRSGPSPPSLAPSASVSSPHPTIQI 49

[Close]
BLAST of Bhi05G000244 vs. NCBI nr
Match: XP_008463116.1 (PREDICTED: DAR GTPase 3, chloroplastic [Cucumis melo])

HSP 1 Score: 61.6 bits (148), Expect = 1.9e-06
Identity = 30/47 (63.83%), Postives = 34/47 (72.34%), Query Frame = 0 

Query: 20 LHIQLSGLCLPTAPAILPHLFYCRSGPSPPSLSPSTSLSSSHPTIHL 67
          LHI  SG  LP    I PHL +CRSGPSPPSL+PS S+SS HPTI +
Sbjct: 3  LHIHPSGFFLPNTRTISPHLSFCRSGPSPPSLAPSASVSSPHPTIQI 49

The following BLAST results are available for this feature:
BLAST of Bhi05G000244 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi05G000244 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi05G000244 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KMJ7|A0A0A0KMJ7_CUCSA9.5e-0763.83Mitochondrial GTPase 1 OS=Cucumis sativus OX=3659 GN=Csa_5G308800 PE=3 SV=1[more]
tr|A0A1S3CIW2|A0A1S3CIW2_CUCME1.2e-0663.83DAR GTPase 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501342 PE=4 SV=1[more]
BLAST of Bhi05G000244 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023554315.12.9e-0768.09DAR GTPase 3, chloroplastic [Cucurbita pepo subsp. pepo][more]
XP_022967431.11.1e-0665.96DAR GTPase 3, chloroplastic [Cucurbita maxima][more]
KGN50875.11.4e-0663.83hypothetical protein Csa_5G308800 [Cucumis sativus][more]
XP_011655122.11.4e-0663.83PREDICTED: mitochondrial ribosome-associated GTPase 1 [Cucumis sativus][more]
XP_008463116.11.9e-0663.83PREDICTED: DAR GTPase 3, chloroplastic [Cucumis melo][more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi05M000244Bhi05M000244mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi05G000244Wax gourdwgowgoB077
Bhi05G000244Cucumber (Gy14) v1cgywgoB380
Bhi05G000244Cucumber (Gy14) v2cgybwgoB540
Bhi05G000244Cucurbita maxima (Rimu)cmawgoB0480
Bhi05G000244Cucurbita maxima (Rimu)cmawgoB0482
Bhi05G000244Cucurbita maxima (Rimu)cmawgoB0645
Bhi05G000244Cucurbita maxima (Rimu)cmawgoB0730
Bhi05G000244Cucurbita maxima (Rimu)cmawgoB1114
Bhi05G000244Cucurbita maxima (Rimu)cmawgoB1113
Bhi05G000244Cucurbita moschata (Rifu)cmowgoB0480
Bhi05G000244Cucurbita moschata (Rifu)cmowgoB0482
Bhi05G000244Cucurbita moschata (Rifu)cmowgoB0646
Bhi05G000244Cucurbita moschata (Rifu)cmowgoB0725
Bhi05G000244Cucurbita moschata (Rifu)cmowgoB1112
Bhi05G000244Cucurbita moschata (Rifu)cmowgoB1113
Bhi05G000244Cucurbita pepo (Zucchini)cpewgoB0195
Bhi05G000244Cucurbita pepo (Zucchini)cpewgoB0197
Bhi05G000244Cucurbita pepo (Zucchini)cpewgoB0405
Bhi05G000244Cucurbita pepo (Zucchini)cpewgoB0321
Bhi05G000244Cucurbita pepo (Zucchini)cpewgoB0407
Bhi05G000244Cucurbita pepo (Zucchini)cpewgoB0800
Bhi05G000244Cucurbita pepo (Zucchini)cpewgoB0936
Bhi05G000244Cucurbita pepo (Zucchini)cpewgoB1120
Bhi05G000244Wild cucumber (PI 183967)cpiwgoB570
Bhi05G000244Wild cucumber (PI 183967)cpiwgoB572
Bhi05G000244Cucumber (Chinese Long) v3cucwgoB583
Bhi05G000244Cucumber (Chinese Long) v3cucwgoB585
Bhi05G000244Cucumber (Chinese Long) v2cuwgoB566
Bhi05G000244Cucumber (Chinese Long) v2cuwgoB568
Bhi05G000244Bottle gourd (USVL1VR-Ls)lsiwgoB050
Bhi05G000244Bottle gourd (USVL1VR-Ls)lsiwgoB224
Bhi05G000244Bottle gourd (USVL1VR-Ls)lsiwgoB459
Bhi05G000244Melon (DHL92) v3.6.1medwgoB480
Bhi05G000244Melon (DHL92) v3.5.1mewgoB478
Bhi05G000244Watermelon (Charleston Gray)wcgwgoB049
Bhi05G000244Watermelon (Charleston Gray)wcgwgoB526
Bhi05G000244Watermelon (Charleston Gray)wcgwgoB585
Bhi05G000244Watermelon (97103) v2wgowmbB261
Bhi05G000244Watermelon (97103) v2wgowmbB278
Bhi05G000244Watermelon (97103) v1wgowmB260
Bhi05G000244Watermelon (97103) v1wgowmB265
Bhi05G000244Watermelon (97103) v1wgowmB288
Bhi05G000244Silver-seed gourdcarwgoB0130
Bhi05G000244Silver-seed gourdcarwgoB0887
Bhi05G000244Silver-seed gourdcarwgoB1013