Bhi05G000176 (gene) Wax gourd

NameBhi05G000176
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr5 : 4845657 .. 4845956 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGATCCAATTTGCTTTCTTTTTAGCCATTTTGGTTCTTCTTGCCAACGCTCATCAGCTCCAAAGTTGCAGAACCATGAAAGAAGATCGACAAAAGTGGTCGACCGAGCTACTTCTTCAGCAGTCGTTGCAGAGGGCGCCGGTCCCTCCCTCGGCCAGAAATGGCGGCACAAATATCCCAGTACCGGTCGGGCAAAGGGCATTTTCAGGAAAATCTCCGGCGGCGCCGGCACACAGCTACAATATAATTGATCATGTACCGGTTCCTTTTGGCGTGGCCATGAAGACAAACCAATAA

mRNA sequence

ATGAAGATCCAATTTGCTTTCTTTTTAGCCATTTTGGTTCTTCTTGCCAACGCTCATCAGCTCCAAAGTTGCAGAACCATGAAAGAAGATCGACAAAAGTGGTCGACCGAGCTACTTCTTCAGCAGTCGTTGCAGAGGGCGCCGGTCCCTCCCTCGGCCAGAAATGGCGGCACAAATATCCCAGTACCGGTCGGGCAAAGGGCATTTTCAGGAAAATCTCCGGCGGCGCCGGCACACAGCTACAATATAATTGATCATGTACCGGTTCCTTTTGGCGTGGCCATGAAGACAAACCAATAA

Coding sequence (CDS)

ATGAAGATCCAATTTGCTTTCTTTTTAGCCATTTTGGTTCTTCTTGCCAACGCTCATCAGCTCCAAAGTTGCAGAACCATGAAAGAAGATCGACAAAAGTGGTCGACCGAGCTACTTCTTCAGCAGTCGTTGCAGAGGGCGCCGGTCCCTCCCTCGGCCAGAAATGGCGGCACAAATATCCCAGTACCGGTCGGGCAAAGGGCATTTTCAGGAAAATCTCCGGCGGCGCCGGCACACAGCTACAATATAATTGATCATGTACCGGTTCCTTTTGGCGTGGCCATGAAGACAAACCAATAA

Protein sequence

MKIQFAFFLAILVLLANAHQLQSCRTMKEDRQKWSTELLLQQSLQRAPVPPSARNGGTNIPVPVGQRAFSGKSPAAPAHSYNIIDHVPVPFGVAMKTNQ
BLAST of Bhi05G000176 vs. TrEMBL
Match: tr|A0A0A0LCY5|A0A0A0LCY5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G393150 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 9.2e-25
Identity = 62/83 (74.70%), Postives = 72/83 (86.75%), Query Frame = 0

Query: 1  MKIQFAFFLAILVLLANAHQLQSCRTMKEDRQKWSTEL-LLQQSLQRAPVPPSARNGGTN 60
          MKIQF+F LAILVLLAN H LQSCRT+K+D+Q WS +L LLQQSLQR PVPPSA+NG TN
Sbjct: 1  MKIQFSFLLAILVLLANTHHLQSCRTIKDDQQNWSIDLQLLQQSLQRVPVPPSAKNGDTN 60

Query: 61 IPVPVGQRAFSGKSPAAPAHSYN 83
          IPVPVGQRAF+GK+ AA A +Y+
Sbjct: 61 IPVPVGQRAFAGKTSAALARNYS 83

BLAST of Bhi05G000176 vs. NCBI nr
Match: KGN57926.1 (hypothetical protein Csa_3G393150 [Cucumis sativus])

HSP 1 Score: 121.7 bits (304), Expect = 1.4e-24
Identity = 62/83 (74.70%), Postives = 72/83 (86.75%), Query Frame = 0

Query: 1  MKIQFAFFLAILVLLANAHQLQSCRTMKEDRQKWSTEL-LLQQSLQRAPVPPSARNGGTN 60
          MKIQF+F LAILVLLAN H LQSCRT+K+D+Q WS +L LLQQSLQR PVPPSA+NG TN
Sbjct: 1  MKIQFSFLLAILVLLANTHHLQSCRTIKDDQQNWSIDLQLLQQSLQRVPVPPSAKNGDTN 60

Query: 61 IPVPVGQRAFSGKSPAAPAHSYN 83
          IPVPVGQRAF+GK+ AA A +Y+
Sbjct: 61 IPVPVGQRAFAGKTSAALARNYS 83

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LCY5|A0A0A0LCY5_CUCSA9.2e-2574.70Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G393150 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KGN57926.11.4e-2474.70hypothetical protein Csa_3G393150 [Cucumis sativus][more]

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi05M000176Bhi05M000176mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..75
NoneNo IPR availablePANTHERPTHR33592FAMILY NOT NAMEDcoord: 2..95