Bhi05G000088 (gene) Wax gourd

Overview
NameBhi05G000088
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionPentatricopeptide repeat-containing protein
Locationchr5 : 2520230 .. 2523009 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTCCAACGACGATGGCAACGGCTCCAAGATAGGATGTGCAACACCGACCCAGATGGACTACCACAAACGTAGATGAATATACCACAAATGGTGATAGAACTGCCCAAGCCTGAATGGATCTGCCATGAAGGGTGACGGAACAGTACGACCATGTTGAGAAGTTTGTCATTATTAAACTTTATTTATGGCATTTAGTGTGACTTTTGGGTTTTGTGACTTTTAGTTTTTTGTAACCAATAGCGATTTTTGAGTTATAGGAGTTATGTGAGTTATGAGCATTTGATGACATTTATAGCTTTAAACCATTGGCATTCATATGGTTATGTTTGTAAGCCTATATTAAAGCATGCTTAATTGAATGGAAAATATATCTCTCGTTTTTCATATTTGTCCTCCACGTTTTTTTCTAACATAGTGGTATCAGAGCTAGAAGAAAATATTGAGAGAAAAATGGCCAACGGTGGGATAGGTTCACTTAAACTACCAATGCTTACCAAGCTCAACTATGACAATTGGAGCATCAAGATAAAAACATCACTAGGAGCACAAGACGTGTGGGAGATCGTGGAGAATGGTTTCCAAGAGGCAGAAGCTGGAGCCAATCAAACGCAAAGAGATGCGTTAAAAGAGATAAGAAAGAAGGACAAGAAGGCTCTTTTTATCTTATATCAATTGTTGGACAAAGATACGTTTGAGACCATCGGCAATGCAGAGACGTCAAAGGCGGCATGGGACAAGCTCCAATCGAGTCATAGAGGAGCCGATCGTGTGAAAAAGGTACAGTTACAAACCTTACGTCACTACAAGAATTTTGGGCTTTAATGTCGGTTGGAAAAAGTGAAACCGGATGTATAATGTCGGTTTTGTTTTTTTTAAAAAAGAGGATCTTTAGGTATACCTTTAATGTCGGTTTAAAACTGACATTAAAGATCCACTTTTTTTTTTTTTTTTTTTTTTTTTATTAAAAAACCCATTCCCTCCCATTTTTTTTCATTTCCCACTTCACATCTCCCCCTCCAAATTTTCTTTTTCCTTTCATTCCCAGACTTCCACTCACCCAACAACCCACGCGAAACCCTTCCAAAACGTGACTCCTTTCTTCCTTCCACGCGAAACCCACAACCCGGCCAAGCATCTGGCCAACACCTTCCCTGATCACTCTCTCCTTGTTCATTTCCAGAAACCGATGGTCTTGAATGCGCTCTTCACGGAGATAGAAGACCGGTGACTCGCAGACTTCAGAGCAGGCTTGTTGGTGGTAGCGGCGAAAAAGTGAAACGGGGAGCAGGCTTTGTTCAGTTCGAGAAAAAGGAAATTCTAAAGCTTTATTCGATGGGTATTGTTGGTGGTAGCGGCTTAAAAATGAGTAAATGAAGTCCAGAAGAAAGAAAATGTTTTTTTTTCTTTTCTTTTCTTTTTCTTTCATTTTTAAATAATGTCATGTTCTTTGTATTTGGTATTAGAGAGGGATAGTGGAATAATGTTTTCAACAAAAGCAAGAAGTAAATCATACTGAATTGGTTGTTATTGTGTTTGATTTTGTTGGTGGTGGCTTAACCTCTGCTTTTTCTATTAGGAATATAAAACTCTCGAGCATCCCATTTCACCTAATATTCATTAATGGTCCTTAGGTGACCAACAAAAACACTAATAGCAATGGAACGTGTGTGTGTATGTGTGAGTTGGGGGGGGGGGGAGGAGGGTATGGATGTTACTTTTGTATGAGTTCACTACAGTATTGTTTATGACTCAACTTTCACGTGCCCTACTTAGATAATATTTTCTTCTTTCTTGCCTATATTGGTATCTGTTCCTTATATGTAAGGTATACGTTACATCTTTACTTAAAATTTGATTGTGAACTGGCACTGATATGATAATATATGCTTGATTACCAATTTTTATCAGAGCAAGGTAAAACAGTTACGCAGTACATGACTTGAACTTATTTACTACCGAGTTTTCTTGATCTTTGTTGATTTTCTATGATATACTGCAGAGTTTGCCGTATCAGAAAAATCATTCACTAATCCAATTGAATGTTGATGCGGAGCCAAAGTTTGTAGATCTTCGGGAAGCTCTGTCGCTGTTAAAAGATGGTACGAGAATTGAAACTTCTTACTATATTCCACTATTGCAAGAATGTATAGATAAGAATTTAGCTGCAGAAGCGGAAATTATCCATGGACATATCGTAAAAATTGGGACTCATGAAGACTTATTTGTAATGACTTTTCTTGTTAACGTTTATACGAAATGTGGAGTCATGGAAATTGCTCGTAAAGTATTTGATAATTTGCCTAGAAGAAATGTCATTGCATGGACAACTCTAGTGACTGGTTATGTTCAGAATTCATAGCCTTTGGTTGCTTTTCGAGTGTTCATTAAAATGTTGGAAGCTGGAGCTTATCCTACAAACTATACGCTCGGAATCGTGTTGAGTGCTTGTTGTTCCTTGCAATCTATCGAATTCGGGAAGCAGGTTCATGCATATATCATCAAATATCATATAGATTTCGACACTAGTATTGGCAACTCTCTTTCGAACTTCTACTTTAATTCTGGGAGCTTGGAATTTGCAATAATGCCTTCAAGAAAATTAAGAAAAAGAATGTGATTTCATGGACTTCAGTTGTATCTTCCTGTTGTGATAATGGTCAAGCAGCTTGGAGTTTAAGTTTCTTCGCCGAGATGCTCTCGGATGGTGTGGAACCAAACGAGTACACTTTAACAAGTGTCTTGAGCGCTTGTTGTGTAATGTTGACATTGGGTTGA

mRNA sequence

ATGGCGTCCAACGACGATGGCAACGGCTCCAAGATAGGATGTGCAACACCGACCCAGATGGACTACCACAAACAAACCGATGGTCTTGAATGCGCTCTTCACGGAGATAGAAGACCGGTGACTCGCAGACTTCAGAGCAGGCTTGTTGGTGGTAGCGGCGAAAAAGTGAAACGGGGAGCAGGCTTTGTTCAGTTCGAGAAAAAGGAAATTCTAAAGCTTTATTCGATGGGTATTAGTTTGCCGTATCAGAAAAATCATTCACTAATCCAATTGAATGTTGATGCGGAGCCAAAGTTTGTAGATCTTCGGGAAGCTCTGTCGCTGTTAAAAGATGGTACGAGAATTGAAACTTCTTACTATATTCCACTATTGCAAGAATGTATAGATAAGAATTTAGCTGCAGAAGCGGAAATTATCCATGGACATATCGTAAAAATTGGGACTCATGAAGACTTATTTGTAATGACTTTTCTTGTTAACGTTTATACGAAATGTGGAGTCATGGAAATTGCTCGTAAACCTTTGGTTGCTTTTCGAGTGTTCATTAAAATGTTGGAAGCTGGAGCTTATCCTACAAACTATACGCTCGGAATCGTGTTGAGTGCTTGTTGTTCCTTGCAATCTATCGAATTCGGGAAGCAGCTTGGAATTTGCAATAATGCCTTCAAGAAAATTAAGAAAAAGAATGTGATTTCATGGACTTCAGTTGTATCTTCCTGTTGTGATAATGGTCAAGCAGCTTGGAGTTTAAGTTTCTTCGCCGAGATGCTCTCGGATGGTGTGGAACCAAACGAGTACACTTTAACAAGTGTCTTGAGCGCTTGTTGTGTAATGTTGACATTGGGTTGA

Coding sequence (CDS)

ATGGCGTCCAACGACGATGGCAACGGCTCCAAGATAGGATGTGCAACACCGACCCAGATGGACTACCACAAACAAACCGATGGTCTTGAATGCGCTCTTCACGGAGATAGAAGACCGGTGACTCGCAGACTTCAGAGCAGGCTTGTTGGTGGTAGCGGCGAAAAAGTGAAACGGGGAGCAGGCTTTGTTCAGTTCGAGAAAAAGGAAATTCTAAAGCTTTATTCGATGGGTATTAGTTTGCCGTATCAGAAAAATCATTCACTAATCCAATTGAATGTTGATGCGGAGCCAAAGTTTGTAGATCTTCGGGAAGCTCTGTCGCTGTTAAAAGATGGTACGAGAATTGAAACTTCTTACTATATTCCACTATTGCAAGAATGTATAGATAAGAATTTAGCTGCAGAAGCGGAAATTATCCATGGACATATCGTAAAAATTGGGACTCATGAAGACTTATTTGTAATGACTTTTCTTGTTAACGTTTATACGAAATGTGGAGTCATGGAAATTGCTCGTAAACCTTTGGTTGCTTTTCGAGTGTTCATTAAAATGTTGGAAGCTGGAGCTTATCCTACAAACTATACGCTCGGAATCGTGTTGAGTGCTTGTTGTTCCTTGCAATCTATCGAATTCGGGAAGCAGCTTGGAATTTGCAATAATGCCTTCAAGAAAATTAAGAAAAAGAATGTGATTTCATGGACTTCAGTTGTATCTTCCTGTTGTGATAATGGTCAAGCAGCTTGGAGTTTAAGTTTCTTCGCCGAGATGCTCTCGGATGGTGTGGAACCAAACGAGTACACTTTAACAAGTGTCTTGAGCGCTTGTTGTGTAATGTTGACATTGGGTTGA

Protein sequence

MASNDDGNGSKIGCATPTQMDYHKQTDGLECALHGDRRPVTRRLQSRLVGGSGEKVKRGAGFVQFEKKEILKLYSMGISLPYQKNHSLIQLNVDAEPKFVDLREALSLLKDGTRIETSYYIPLLQECIDKNLAAEAEIIHGHIVKIGTHEDLFVMTFLVNVYTKCGVMEIARKPLVAFRVFIKMLEAGAYPTNYTLGIVLSACCSLQSIEFGKQLGICNNAFKKIKKKNVISWTSVVSSCCDNGQAAWSLSFFAEMLSDGVEPNEYTLTSVLSACCVMLTLG
Homology
[Close]
BLAST of Bhi05G000088 vs. Swiss-Prot
Match: sp|P93005|PP181_ARATH (Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E19 PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.8e-15
Identity = 57/209 (27.27%), Postives = 90/209 (43.06%), Query Frame = 0 

Query: 121 IPLLQECIDKNLAAEAEIIHGHIVKIGTHEDLFVMTFLVNVYTKCGVMEIARKPL----- 180
           + +L  C D     E + +H  ++K+G    LF  T LV++Y K G +  ARK       
Sbjct: 326 VGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQE 385

Query: 181 --------------------VAFRVFIKMLEAGAYPTNYTLGIVLSACCSLQSIEFGKQ- 240
                                A  ++ +M  AG  P + T+  VL AC SL ++E GKQ 
Sbjct: 386 RDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQV 445

Query: 241 ----------------------------LGICNNAFKKIKKKNVISWTSVVSSCCDNGQA 276
                                       L   N  F++   K+V+SW +++S    NGQ 
Sbjct: 446 HGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQG 505

[Close]
BLAST of Bhi05G000088 vs. Swiss-Prot
Match: sp|O04659|PP398_ARATH (Pentatricopeptide repeat-containing protein At5g27110 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E14 PE=2 SV=2)

HSP 1 Score: 76.6 bits (187), Expect = 4.8e-13
Identity = 57/222 (25.68%), Postives = 92/222 (41.44%), Query Frame = 0 

Query: 108 LLKDGTRIETSYYIPLLQECIDKNLAAEAEIIHGHIVKIGTHEDLFVMTFLVNVYTKCGV 167
           ++ +GTR   +    +L  C         + IHG++++   + D++V   L+++Y KCG 
Sbjct: 300 MIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGE 359

Query: 168 MEIARKP-------------------------LVAFRVFIKMLEAGAYPTNYTLGIVLSA 227
             +A                              A  V+ +M+  G  P   T   VL A
Sbjct: 360 ANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPA 419

Query: 228 CCSLQSIEFGKQLGI-----------------------CNN------AFKKIKKKNVISW 276
           C  L ++E GKQ+ +                       C N       F  I KK+V+SW
Sbjct: 420 CSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSW 479

[Close]
BLAST of Bhi05G000088 vs. Swiss-Prot
Match: sp|Q9SI53|PP147_ARATH (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H44 PE=2 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 6.3e-13
Identity = 60/220 (27.27%), Postives = 92/220 (41.82%), Query Frame = 0 

Query: 108 LLKDGTRIETSYYIPLLQECIDKNLAAEAEIIHGHIVKIGTHEDLFVMTFLVNVYTKCGV 167
           +L+D  R     Y  +L+ C   N  ++  ++H  I+K G   D+FV + L++V+ K G 
Sbjct: 153 MLRDNVRPNVYTYSSVLRSC---NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGE 212

Query: 168 MEIA-------------------------RKPLVAFRVFIKMLEAGAYPTNYTLGIVLSA 227
            E A                          +  VA  +F +M  AG      TL  VL A
Sbjct: 213 PEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRA 272

Query: 228 CCSLQSIEFGKQLG----------ICNNA-----------------FKKIKKKNVISWTS 276
           C  L  +E G Q            I NNA                 F ++K+++VI+W++
Sbjct: 273 CTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWST 332

[Close]
BLAST of Bhi05G000088 vs. Swiss-Prot
Match: sp|Q9CAA8|PP108_ARATH (Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H22 PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 5.3e-12
Identity = 52/218 (23.85%), Postives = 97/218 (44.50%), Query Frame = 0 

Query: 112 GTRIETSYYIPLLQECIDKNLAAEAEIIHGHIVKIGTHEDLFVMTFLVNVYTKCGVMEIA 171
           G +++   +  +L  C       E + IH  I++    + ++V + L+++Y KC  +  A
Sbjct: 265 GLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYA 324

Query: 172 R--------KPLV-----------------AFRVFIKMLEAGAYPTNYTLGIVLSACCSL 231
           +        K +V                 A ++F+ M  +G  P +YTLG  +SAC ++
Sbjct: 325 KTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANV 384

Query: 232 QSIEFGKQL-----------------------GICNN------AFKKIKKKNVISWTSVV 276
            S+E G Q                        G C +       F ++  ++ +SWT++V
Sbjct: 385 SSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMV 444

[Close]
BLAST of Bhi05G000088 vs. Swiss-Prot
Match: sp|Q9FXH1|PPR52_ARATH (Pentatricopeptide repeat-containing protein At1g19720 OS=Arabidopsis thaliana OX=3702 GN=DYW7 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 9.0e-12
Identity = 49/211 (23.22%), Postives = 88/211 (41.71%), Query Frame = 0 

Query: 107 SLLKDGTRIETSYYIPLLQECIDKNLAAEAEIIHGHIVKIGTHEDLFVMTFLVNVYTKCG 166
           SL + G++++ S Y+ LL+ CID        I+H     + T  D+FV T L+++Y KCG
Sbjct: 71  SLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARF-GLFTEPDVFVETKLLSMYAKCG 130

Query: 167 VMEIARKPLVAFR-------------------------VFIKMLEAGAYPTNYTLGIVLS 226
            +  ARK   + R                         +F  M++ G  P ++    +L 
Sbjct: 131 CIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQ 190

Query: 227 ACCSLQSIEFGK-----------------------------QLGICNNAFKKIKKKNVIS 264
            C +   +E GK                             +L      F+++++++VI+
Sbjct: 191 GCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIA 250

[Close]
BLAST of Bhi05G000088 vs. TAIR10
Match: AT2G33680.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 84.7 bits (208), Expect = 9.8e-17
Identity = 57/209 (27.27%), Postives = 90/209 (43.06%), Query Frame = 0 

Query: 121 IPLLQECIDKNLAAEAEIIHGHIVKIGTHEDLFVMTFLVNVYTKCGVMEIARKPL----- 180
           + +L  C D     E + +H  ++K+G    LF  T LV++Y K G +  ARK       
Sbjct: 326 VGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQE 385

Query: 181 --------------------VAFRVFIKMLEAGAYPTNYTLGIVLSACCSLQSIEFGKQ- 240
                                A  ++ +M  AG  P + T+  VL AC SL ++E GKQ 
Sbjct: 386 RDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQV 445

Query: 241 ----------------------------LGICNNAFKKIKKKNVISWTSVVSSCCDNGQA 276
                                       L   N  F++   K+V+SW +++S    NGQ 
Sbjct: 446 HGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQG 505

[Close]
BLAST of Bhi05G000088 vs. TAIR10
Match: AT5G27110.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 76.6 bits (187), Expect = 2.7e-14
Identity = 57/222 (25.68%), Postives = 92/222 (41.44%), Query Frame = 0 

Query: 108 LLKDGTRIETSYYIPLLQECIDKNLAAEAEIIHGHIVKIGTHEDLFVMTFLVNVYTKCGV 167
           ++ +GTR   +    +L  C         + IHG++++   + D++V   L+++Y KCG 
Sbjct: 300 MIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGE 359

Query: 168 MEIARKP-------------------------LVAFRVFIKMLEAGAYPTNYTLGIVLSA 227
             +A                              A  V+ +M+  G  P   T   VL A
Sbjct: 360 ANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPA 419

Query: 228 CCSLQSIEFGKQLGI-----------------------CNN------AFKKIKKKNVISW 276
           C  L ++E GKQ+ +                       C N       F  I KK+V+SW
Sbjct: 420 CSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSW 479

[Close]
BLAST of Bhi05G000088 vs. TAIR10
Match: AT2G03880.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 76.3 bits (186), Expect = 3.5e-14
Identity = 60/220 (27.27%), Postives = 92/220 (41.82%), Query Frame = 0 

Query: 108 LLKDGTRIETSYYIPLLQECIDKNLAAEAEIIHGHIVKIGTHEDLFVMTFLVNVYTKCGV 167
           +L+D  R     Y  +L+ C   N  ++  ++H  I+K G   D+FV + L++V+ K G 
Sbjct: 153 MLRDNVRPNVYTYSSVLRSC---NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGE 212

Query: 168 MEIA-------------------------RKPLVAFRVFIKMLEAGAYPTNYTLGIVLSA 227
            E A                          +  VA  +F +M  AG      TL  VL A
Sbjct: 213 PEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRA 272

Query: 228 CCSLQSIEFGKQLG----------ICNNA-----------------FKKIKKKNVISWTS 276
           C  L  +E G Q            I NNA                 F ++K+++VI+W++
Sbjct: 273 CTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWST 332

[Close]
BLAST of Bhi05G000088 vs. TAIR10
Match: AT1G68930.1 (pentatricopeptide (PPR) repeat-containing protein)

HSP 1 Score: 73.2 bits (178), Expect = 2.9e-13
Identity = 52/218 (23.85%), Postives = 97/218 (44.50%), Query Frame = 0 

Query: 112 GTRIETSYYIPLLQECIDKNLAAEAEIIHGHIVKIGTHEDLFVMTFLVNVYTKCGVMEIA 171
           G +++   +  +L  C       E + IH  I++    + ++V + L+++Y KC  +  A
Sbjct: 265 GLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYA 324

Query: 172 R--------KPLV-----------------AFRVFIKMLEAGAYPTNYTLGIVLSACCSL 231
           +        K +V                 A ++F+ M  +G  P +YTLG  +SAC ++
Sbjct: 325 KTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANV 384

Query: 232 QSIEFGKQL-----------------------GICNN------AFKKIKKKNVISWTSVV 276
            S+E G Q                        G C +       F ++  ++ +SWT++V
Sbjct: 385 SSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMV 444

[Close]
BLAST of Bhi05G000088 vs. TAIR10
Match: AT1G19720.1 (Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 72.4 bits (176), Expect = 5.0e-13
Identity = 49/211 (23.22%), Postives = 88/211 (41.71%), Query Frame = 0 

Query: 107 SLLKDGTRIETSYYIPLLQECIDKNLAAEAEIIHGHIVKIGTHEDLFVMTFLVNVYTKCG 166
           SL + G++++ S Y+ LL+ CID        I+H     + T  D+FV T L+++Y KCG
Sbjct: 71  SLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARF-GLFTEPDVFVETKLLSMYAKCG 130

Query: 167 VMEIARKPLVAFR-------------------------VFIKMLEAGAYPTNYTLGIVLS 226
            +  ARK   + R                         +F  M++ G  P ++    +L 
Sbjct: 131 CIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQ 190

Query: 227 ACCSLQSIEFGK-----------------------------QLGICNNAFKKIKKKNVIS 264
            C +   +E GK                             +L      F+++++++VI+
Sbjct: 191 GCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIA 250

[Close]
BLAST of Bhi05G000088 vs. TrEMBL
Match: tr|A0A0A0LRW6|A0A0A0LRW6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G372180 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.7e-68
Identity = 154/257 (59.92%), Postives = 171/257 (66.54%), Query Frame = 0 

Query: 79  SLPYQKNHSLIQLNVDAEPKFVDLREALSLLKDGTRIETSYYIPLLQECIDKNLAAEAEI 138
           S+ +QKNHSLIQLNV      VD  E     K GTRIE+SYY PLLQECID+NLA EA +
Sbjct: 36  SVGFQKNHSLIQLNV------VDAEEP----KLGTRIESSYYFPLLQECIDRNLATEARM 95

Query: 139 IHGHIVKIGTHEDLFVMTFLVNVYTKCGVMEIARK------------------------- 198
           IHGHIVK G HEDLFVMTFLVNVY+KCGVME A K                         
Sbjct: 96  IHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSH 155

Query: 199 PLVAFRVFIKMLEAGAYPTNYTLGIVLSACCSLQSIEFGKQ------------------- 258
           PL+A ++FIKMLEAGAYP+NYTLGIVL+AC SLQSIEFGKQ                   
Sbjct: 156 PLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNS 215

Query: 259 ----------LGICNNAFKKIKKKNVISWTSVVSSCCDNGQAAWSLSFFAEMLSDGVEPN 282
                     L     AFK IK+K+VISWTSV+SSCCDNGQAA SLSFF +MLSDG++PN
Sbjct: 216 LSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPN 275

[Close]
BLAST of Bhi05G000088 vs. TrEMBL
Match: tr|A0A1S3BBK8|A0A1S3BBK8_CUCME (putative pentatricopeptide repeat-containing protein At5g52630 OS=Cucumis melo OX=3656 GN=LOC103488145 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 7.3e-67
Identity = 151/257 (58.75%), Postives = 168/257 (65.37%), Query Frame = 0 

Query: 79  SLPYQKNHSLIQLNVDAEPKFVDLREALSLLKDGTRIETSYYIPLLQECIDKNLAAEAEI 138
           S+ +QKNHSLIQLNV      VD  E     K GTRIE+SYY PLLQECID+NLA EA +
Sbjct: 35  SVGFQKNHSLIQLNV------VDAEEP----KLGTRIESSYYFPLLQECIDRNLATEARM 94

Query: 139 IHGHIVKIGTHEDLFVMTFLVNVYTKCGVMEIARK------------------------- 198
           IHGHIVK G HEDLFVMTFLVNVY+KCGVME A K                         
Sbjct: 95  IHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVIAWTTLLTGYVQNSH 154

Query: 199 PLVAFRVFIKMLEAGAYPTNYTLGIVLSACCSLQSIEFGKQ------------------- 258
           PL+A ++FI+MLEAGAYP+NYTLGIVL+AC SLQSIEFGKQ                   
Sbjct: 155 PLLALQLFIQMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYIIKYHIDFDTSIGNS 214

Query: 259 ----------LGICNNAFKKIKKKNVISWTSVVSSCCDNGQAAWSLSFFAEMLSDGVEPN 282
                     L     AF+KIK+K+VISWTS +SSCCDNGQAA SLSFF +ML DGVEPN
Sbjct: 215 LSSFYSKFRSLEFAIRAFQKIKEKDVISWTSAISSCCDNGQAARSLSFFIDMLLDGVEPN 274

[Close]
BLAST of Bhi05G000088 vs. TrEMBL
Match: tr|A0A251RHT7|A0A251RHT7_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G539500 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 3.8e-63
Identity = 131/257 (50.97%), Postives = 168/257 (65.37%), Query Frame = 0 

Query: 79  SLPYQKNHSLIQLNVDAEPKFVDLREALSLLKDGTRIETSYYIPLLQECIDKNLAAEAEI 138
           ++ YQK+H++  LN  +EPK +D REALS++++G  +E++YY+P+LQ+CIDKN A+EA+I
Sbjct: 34  NVSYQKSHTVTTLNGSSEPKSLDFREALSMIREGENVESTYYVPVLQQCIDKNSASEAKI 93

Query: 139 IHGHIVKIGTHEDLFVMTFLVNVYTKCGVMEIARK------------------------- 198
           +H HI+K G H+DLFV TFLVNVY KCG ME ARK                         
Sbjct: 94  VHAHIIKTGAHQDLFVSTFLVNVYAKCGNMENARKVFDNLPKRNVISWTSLMTGYVHSSQ 153

Query: 199 PLVAFRVFIKMLEAGAYPTNYTLGIVLSACCSLQSIEFGKQL-----------------G 258
           P VA  VF +MLEAGAYPTNYTLGIVL+AC SLQS+  GKQL                  
Sbjct: 154 PEVAIHVFQEMLEAGAYPTNYTLGIVLNACSSLQSVNLGKQLHAYSIKYQIDFDTSIGNS 213

Query: 259 ICN------------NAFKKIKKKNVISWTSVVSSCCDNGQAAWSLSFFAEMLSDGVEPN 282
           +C+             AFKKI++KNVISWT+ +S+C DNG+A   L FF EML +G+EPN
Sbjct: 214 LCSLYSKCGSLESAVKAFKKIEEKNVISWTATISACGDNGEAVRGLKFFTEMLFEGIEPN 273

[Close]
BLAST of Bhi05G000088 vs. TrEMBL
Match: tr|A0A2P6PG98|A0A2P6PG98_ROSCH (Putative tetratricopeptide-like helical domain, DYW domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0233371 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 6.4e-63
Identity = 132/280 (47.14%), Postives = 178/280 (63.57%), Query Frame = 0 

Query: 57  KRGAGFVQFEKKEILKLYSMGISLPYQKNHSLIQLNVDAEPKFVDLREALSLLKDGTRIE 116
           K    F+  EK  I        ++ YQK+ +++  +  +EP+ +D REAL ++++G+++E
Sbjct: 21  KHPTSFISSEKSGI-------ANVSYQKSQTIVNSDGSSEPRSLDFREALVMIREGSKVE 80

Query: 117 TSYYIPLLQECIDKNLAAEAEIIHGHIVKIGTHEDLFVMTFLVNVYTKCGVMEIARK--- 176
           +SYY+PLLQECID+N A++A+++HGHI+K G+H+DLFV TFLVNVY KC +ME ARK   
Sbjct: 81  SSYYVPLLQECIDRNSASDAQVVHGHIIKTGSHQDLFVTTFLVNVYAKCRIMENARKVFD 140

Query: 177 ----------------------PLVAFRVFIKMLEAGAYPTNYTLGIVLSACCSLQSIEF 236
                                 P ++ RVF++MLEAGAYPTNYTLGIVL+A  +L SIE 
Sbjct: 141 KLSRRNVVSWTALMSGYVHNSRPELSIRVFLEMLEAGAYPTNYTLGIVLNASSTLYSIEL 200

Query: 237 GKQL-----------------GICN------------NAFKKIKKKNVISWTSVVSSCCD 283
           GKQL                  +C+             AFKKIK+KNVISWTS +S+C D
Sbjct: 201 GKQLHAYSIKYQIDFDTSIGNSLCSLYSKCGNLESAFKAFKKIKEKNVISWTSAISACGD 260

[Close]
BLAST of Bhi05G000088 vs. TrEMBL
Match: tr|A0A2I4DLF1|A0A2I4DLF1_9ROSI (pentatricopeptide repeat-containing protein At4g14850-like OS=Juglans regia OX=51240 GN=LOC108981298 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 3.6e-58
Identity = 123/258 (47.67%), Postives = 161/258 (62.40%), Query Frame = 0 

Query: 79  SLPYQKNHSLIQLNVDAEPKFVDLREALSLLKDGTRIETSYYIPLLQECIDKNLAAEAEI 138
           S+ YQKN +   L+  +E + +D REAL L+K+GT+IE+SYY+PLLQECI+KN  ++A+I
Sbjct: 41  SISYQKNQAHTHLDGSSELRSLDFREALLLIKEGTKIESSYYVPLLQECIEKNSVSKAQI 100

Query: 139 IHGHIVKIGTHEDLFVMTFLVNVYTKCGVMEIARK------------------------- 198
           +H HI+K GTH DLF+MTFL+NVY KCG M+ ARK                         
Sbjct: 101 VHDHIMKTGTHGDLFIMTFLINVYAKCGTMDYARKVFDNLPRRNVVSWTTLMTGYVYNSQ 160

Query: 199 PLVAFRVFIKMLEAGAYPTNYTLGIVLSACCSLQSIEFGKQ------------------- 258
           P +A +VF +MLEAGAYP+NYTLG  L+AC SL S+  GKQ                   
Sbjct: 161 PELAIQVFQEMLEAGAYPSNYTLGTALNACSSLHSVRLGKQFHAYIIKYQIDFDTSVGNA 220

Query: 259 ----------LGICNNAFKKIKKKNVISWTSVVSSCCDNGQAAWSLSFFAEMLSDGVEPN 283
                     LG    AF++I++KNVISWT+V+S+C DNG+AA  L FF EMLS  ++PN
Sbjct: 221 LCSFYSKFCNLGSAIKAFQRIREKNVISWTAVISACGDNGEAARGLKFFTEMLSKDIKPN 280

[Close]
BLAST of Bhi05G000088 vs. NCBI nr
Match: XP_022131569.1 (putative pentatricopeptide repeat-containing protein At5g52630 [Momordica charantia])

HSP 1 Score: 303.9 bits (777), Expect = 5.6e-79
Identity = 166/257 (64.59%), Postives = 181/257 (70.43%), Query Frame = 0 

Query: 79  SLPYQKNHSLIQLNVDAEPKFVDLREALSLLKDGTRIETSYYIPLLQECIDKNLAAEAEI 138
           S+PYQKN SLI+LNVDAEP+FVDLREALSLLK+GTRIETSYYIPLLQECI  NLAAEAE+
Sbjct: 36  SVPYQKNQSLIRLNVDAEPRFVDLREALSLLKEGTRIETSYYIPLLQECIVSNLAAEAEV 95

Query: 139 IHGHIVKIGTHEDLFVMTFLVNVYTKCGVMEIARK------------------------- 198
           IHGHI+K GTHEDLFV TFLVNVY KCGVME ARK                         
Sbjct: 96  IHGHIIKTGTHEDLFVTTFLVNVYAKCGVMEHARKVFDNLPRRNVVAWTTLVTGYVQNSQ 155

Query: 199 PLVAFRVFIKMLEAGAYPTNYTLGIVLSACCSLQSIEFGKQ------------------- 258
           P+ A RVFI+ML+AGAYPTNYTLGIVL+AC SLQSIE GKQ                   
Sbjct: 156 PVAALRVFIEMLQAGAYPTNYTLGIVLNACSSLQSIELGKQVHGYIIKYHIDFDTSIGNS 215

Query: 259 ----------LGICNNAFKKIKKKNVISWTSVVSSCCDNGQAAWSLSFFAEMLSDGVEPN 282
                     L     AF+KI++KNVISWTSVVS+C DNGQAA SLSFF EML +GVEPN
Sbjct: 216 LSSFYSKFGSLDFAIRAFQKIEEKNVISWTSVVSACGDNGQAAQSLSFFTEMLEEGVEPN 275

[Close]
BLAST of Bhi05G000088 vs. NCBI nr
Match: XP_023538358.1 (pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp. pepo] >XP_023538359.1 pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 303.9 bits (777), Expect = 5.6e-79
Identity = 167/265 (63.02%), Postives = 186/265 (70.19%), Query Frame = 0 

Query: 71  LKLYSMGISLPYQKNHSLIQLNVDAEPKFVDLREALSLLKDGTRIETSYYIPLLQECIDK 130
           L L     S+ YQKNHSLIQLNVDAEPKFVD+REALSLLK+GT ++TSYY+PLLQECID+
Sbjct: 27  LLLKDKNASVSYQKNHSLIQLNVDAEPKFVDVREALSLLKEGTTVKTSYYVPLLQECIDR 86

Query: 131 NLAAEAEIIHGHIVKIGTHEDLFVMTFLVNVYTKCGVMEIARK----------------- 190
            LAAEAEIIHGHIVK GTHEDLFVMT LVNVY KCGVME ARK                 
Sbjct: 87  KLAAEAEIIHGHIVKTGTHEDLFVMTNLVNVYAKCGVMEKARKVFDNLPRRNVIAWTTLV 146

Query: 191 --------PLVAFRVFIKMLEAGAYPTNYTLGIVLSACCSLQSIEFGKQ----------- 250
                   PL A +VFI+ML+AGAYPTN+TLGIVL+AC SLQSIE GKQ           
Sbjct: 147 TGYVQNSQPLPALKVFIEMLQAGAYPTNFTLGIVLNACSSLQSIELGKQVHAYIIKYHLD 206

Query: 251 ------------------LGICNNAFKKIKKKNVISWTSVVSSCCDNGQAAWSLSFFAEM 282
                             L +   AF+KIK+KNVISWTSVVS+C DNGQAA SLSFF +M
Sbjct: 207 FDTSIGNSLSSFYSKFGCLELAIRAFQKIKEKNVISWTSVVSACGDNGQAARSLSFFTKM 266

[Close]
BLAST of Bhi05G000088 vs. NCBI nr
Match: XP_022951266.1 (putative pentatricopeptide repeat-containing protein At5g52630 [Cucurbita moschata])

HSP 1 Score: 298.5 bits (763), Expect = 2.4e-77
Identity = 165/265 (62.26%), Postives = 183/265 (69.06%), Query Frame = 0 

Query: 71  LKLYSMGISLPYQKNHSLIQLNVDAEPKFVDLREALSLLKDGTRIETSYYIPLLQECIDK 130
           L L   G S+P QKN SLIQLNVDAEPKFVD REALSLLK+GT ++TSYY+PLLQECID+
Sbjct: 27  LLLKDKGASVPNQKNQSLIQLNVDAEPKFVDFREALSLLKEGTTVKTSYYVPLLQECIDR 86

Query: 131 NLAAEAEIIHGHIVKIGTHEDLFVMTFLVNVYTKCGVMEIARK----------------- 190
            LAAEAEIIHGHIVK GTHEDLFVMT LVNVY KCGVME ARK                 
Sbjct: 87  KLAAEAEIIHGHIVKTGTHEDLFVMTNLVNVYAKCGVMEHARKVFDNLPRRNVVGWTTLV 146

Query: 191 --------PLVAFRVFIKMLEAGAYPTNYTLGIVLSACCSLQSIEFGKQ----------- 250
                   PLVA +VFI+ML+AGAYPTN+TLGIVL+AC SLQS+E GKQ           
Sbjct: 147 TGYVQNSQPLVALKVFIEMLQAGAYPTNFTLGIVLNACSSLQSMELGKQVHAYIIKYHLD 206

Query: 251 ------------------LGICNNAFKKIKKKNVISWTSVVSSCCDNGQAAWSLSFFAEM 282
                             L +   AF+KIK+KNVISWTSVVS+C DNGQAA SL+FF EM
Sbjct: 207 FDTSIGNSLSSFYSKFGCLELAIRAFQKIKEKNVISWTSVVSACGDNGQAARSLNFFTEM 266

[Close]
BLAST of Bhi05G000088 vs. NCBI nr
Match: XP_023001915.1 (pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita maxima] >XP_023001916.1 pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita maxima])

HSP 1 Score: 297.4 bits (760), Expect = 5.3e-77
Identity = 164/265 (61.89%), Postives = 184/265 (69.43%), Query Frame = 0 

Query: 71  LKLYSMGISLPYQKNHSLIQLNVDAEPKFVDLREALSLLKDGTRIETSYYIPLLQECIDK 130
           L L     S+ YQKN SLIQLNVDAEPKFVD+REALSLLK+GT ++TSYY+PLLQEC+D+
Sbjct: 27  LLLKDKSASVSYQKNQSLIQLNVDAEPKFVDVREALSLLKEGTTVKTSYYVPLLQECVDR 86

Query: 131 NLAAEAEIIHGHIVKIGTHEDLFVMTFLVNVYTKCGVMEIARK----------------- 190
            LAAEAEIIHGHIVK GTHEDLFVMT LVNVY KCGV+E ARK                 
Sbjct: 87  KLAAEAEIIHGHIVKTGTHEDLFVMTNLVNVYAKCGVVEKARKVFDNLPRRNVVAWTTLV 146

Query: 191 --------PLVAFRVFIKMLEAGAYPTNYTLGIVLSACCSLQSIEFGKQ----------- 250
                   PL A +VFI+ML+AGAYPTN+TLGIVL+AC SLQSIE GKQ           
Sbjct: 147 TGYVQNSQPLPALKVFIEMLQAGAYPTNFTLGIVLNACSSLQSIELGKQVHAYIIKYHLD 206

Query: 251 ------------------LGICNNAFKKIKKKNVISWTSVVSSCCDNGQAAWSLSFFAEM 282
                             L +   AF+KIK+KNVISWTSVVS+C DNGQAA SL FF +M
Sbjct: 207 FDTSIGNSLSSFYSKFGCLELAIRAFQKIKEKNVISWTSVVSACGDNGQAARSLCFFTKM 266

[Close]
BLAST of Bhi05G000088 vs. NCBI nr
Match: XP_023538360.1 (pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 295.8 bits (756), Expect = 1.5e-76
Identity = 164/264 (62.12%), Postives = 180/264 (68.18%), Query Frame = 0 

Query: 71  LKLYSMGISLPYQKNHSLIQLNVDAEPKFVDLREALSLLKDGTRIETSYYIPLLQECIDK 130
           L L     S+P QKN SLIQLNVDAEPKFVD REALSLLK+GT ++TSYY+PLLQECID+
Sbjct: 27  LLLKDKSASVPNQKNQSLIQLNVDAEPKFVDFREALSLLKEGTTVKTSYYVPLLQECIDR 86

Query: 131 NLAAEAEIIHGHIVKIGTHEDLFVMTFLVNVYTKCGVMEIARK----------------- 190
            LAAEAEIIHGHIVK GTHEDLFVMT LVNVY KCGVME ARK                 
Sbjct: 87  KLAAEAEIIHGHIVKTGTHEDLFVMTNLVNVYAKCGVMEHARKVFDNLPRRNVVAWTTLV 146

Query: 191 --------PLVAFRVFIKMLEAGAYPTNYTLGIVLSACCSLQSIEFGKQ----------- 250
                   PLVA +VFI+ML+AGAYPTN+TLGIVL+AC SLQSIE GKQ           
Sbjct: 147 TGYVQNSQPLVALKVFIEMLQAGAYPTNFTLGIVLNACSSLQSIELGKQVHAYIIKYHLD 206

Query: 251 ------------------LGICNNAFKKIKKKNVISWTSVVSSCCDNGQAAWSLSFFAEM 281
                             L +   AF+KIK+KNVISWTSVVS+C DNGQA  SLSFF EM
Sbjct: 207 FDTSIGNSLSSFYSKFGCLELAIRAFQKIKEKNVISWTSVVSACGDNGQATRSLSFFTEM 266

The following BLAST results are available for this feature:
BLAST of Bhi05G000088 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P93005|PP181_ARATH1.8e-1527.27Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana OX... [more]
sp|O04659|PP398_ARATH4.8e-1325.68Pentatricopeptide repeat-containing protein At5g27110 OS=Arabidopsis thaliana OX... [more]
sp|Q9SI53|PP147_ARATH6.3e-1327.27Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidop... [more]
sp|Q9CAA8|PP108_ARATH5.3e-1223.85Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis th... [more]
sp|Q9FXH1|PPR52_ARATH9.0e-1223.22Pentatricopeptide repeat-containing protein At1g19720 OS=Arabidopsis thaliana OX... [more]
BLAST of Bhi05G000088 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G33680.19.8e-1727.27Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G27110.12.7e-1425.68Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G03880.13.5e-1427.27Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G68930.12.9e-1323.85pentatricopeptide (PPR) repeat-containing protein[more]
AT1G19720.15.0e-1323.22Pentatricopeptide repeat (PPR-like) superfamily protein[more]
BLAST of Bhi05G000088 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LRW6|A0A0A0LRW6_CUCSA1.7e-6859.92Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G372180 PE=4 SV=1[more]
tr|A0A1S3BBK8|A0A1S3BBK8_CUCME7.3e-6758.75putative pentatricopeptide repeat-containing protein At5g52630 OS=Cucumis melo O... [more]
tr|A0A251RHT7|A0A251RHT7_PRUPE3.8e-6350.97Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G539500 PE=4 SV=1[more]
tr|A0A2P6PG98|A0A2P6PG98_ROSCH6.4e-6347.14Putative tetratricopeptide-like helical domain, DYW domain-containing protein OS... [more]
tr|A0A2I4DLF1|A0A2I4DLF1_9ROSI3.6e-5847.67pentatricopeptide repeat-containing protein At4g14850-like OS=Juglans regia OX=5... [more]
BLAST of Bhi05G000088 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022131569.15.6e-7964.59putative pentatricopeptide repeat-containing protein At5g52630 [Momordica charan... [more]
XP_023538358.15.6e-7963.02pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp... [more]
XP_022951266.12.4e-7762.26putative pentatricopeptide repeat-containing protein At5g52630 [Cucurbita moscha... [more]
XP_023001915.15.3e-7761.89pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita maxima] >X... [more]
XP_023538360.11.5e-7662.12pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi05M000088Bhi05M000088mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 98..279
e-value: 7.6E-21
score: 76.8
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 228..276
e-value: 3.5E-10
score: 39.8
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 231..265
e-value: 2.6E-6
score: 25.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 229..263
score: 11.038
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 151..191
score: 6.007
NoneNo IPR availablePANTHERPTHR24015:SF779SUBFAMILY NOT NAMEDcoord: 219..276
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 80..173
NoneNo IPR availablePANTHERPTHR24015:SF779SUBFAMILY NOT NAMEDcoord: 80..173
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 219..276

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi05G000088Cucumber (Gy14) v1cgywgoB276
Bhi05G000088Cucumber (Gy14) v1cgywgoB528
Bhi05G000088Cucumber (Gy14) v2cgybwgoB293
Bhi05G000088Cucumber (Gy14) v2cgybwgoB296
Bhi05G000088Cucurbita maxima (Rimu)cmawgoB0344
Bhi05G000088Cucurbita maxima (Rimu)cmawgoB0653
Bhi05G000088Cucurbita maxima (Rimu)cmawgoB0730
Bhi05G000088Cucurbita maxima (Rimu)cmawgoB1024
Bhi05G000088Cucurbita moschata (Rifu)cmowgoB0333
Bhi05G000088Cucurbita moschata (Rifu)cmowgoB0654
Bhi05G000088Cucurbita moschata (Rifu)cmowgoB0725
Bhi05G000088Cucurbita moschata (Rifu)cmowgoB1019
Bhi05G000088Cucurbita pepo (Zucchini)cpewgoB0327
Bhi05G000088Cucurbita pepo (Zucchini)cpewgoB0406
Bhi05G000088Cucurbita pepo (Zucchini)cpewgoB0800
Bhi05G000088Cucurbita pepo (Zucchini)cpewgoB0936
Bhi05G000088Cucurbita pepo (Zucchini)cpewgoB1118
Bhi05G000088Wild cucumber (PI 183967)cpiwgoB306
Bhi05G000088Wild cucumber (PI 183967)cpiwgoB309
Bhi05G000088Cucumber (Chinese Long) v3cucwgoB308
Bhi05G000088Cucumber (Chinese Long) v3cucwgoB311
Bhi05G000088Cucumber (Chinese Long) v2cuwgoB303
Bhi05G000088Cucumber (Chinese Long) v2cuwgoB306
Bhi05G000088Bottle gourd (USVL1VR-Ls)lsiwgoB459
Bhi05G000088Bottle gourd (USVL1VR-Ls)lsiwgoB462
Bhi05G000088Melon (DHL92) v3.6.1medwgoB555
Bhi05G000088Melon (DHL92) v3.5.1mewgoB401
Bhi05G000088Melon (DHL92) v3.5.1mewgoB552
Bhi05G000088Watermelon (Charleston Gray)wcgwgoB040
Bhi05G000088Watermelon (Charleston Gray)wcgwgoB447
Bhi05G000088Watermelon (Charleston Gray)wcgwgoB585
Bhi05G000088Watermelon (97103) v2wgowmbB257
Bhi05G000088Watermelon (97103) v2wgowmbB261
Bhi05G000088Watermelon (97103) v1wgowmB266
Bhi05G000088Watermelon (97103) v1wgowmB270
Bhi05G000088Silver-seed gourdcarwgoB0087
Bhi05G000088Silver-seed gourdcarwgoB0297
Bhi05G000088Silver-seed gourdcarwgoB0916
Bhi05G000088Silver-seed gourdcarwgoB1123