Bhi04G001654 (gene) Wax gourd

Overview
NameBhi04G001654
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionrRNA N-glycosidase
Locationchr4 : 55650799 .. 55651916 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATAATAATACTATGTCCACAGCAGACGTTGGATATGTTATTCACTGCTGATAGTTTTACAATACCATGGCCATTGCTATTACTATAAAAACATAGTGCAAGCTCAGGGATGGATCACACAATCACAAGATAGACGATGGAGATCAAGAAGATGACAATAGTTTTTCTTGTTGTAGTTTTAGCTGCTTCATTCACGGGGAACCACGATGTCTCAGCAGCTCGCACGATTGTCCTCAGTAGATCGACACATCTTGTTGGCCGAGACGGGCTATGTCTCGACGTGATCGGAGGGTACAGCGACAGCCATATTCCAACTCAACTATGGCCATGTGGACCTCAAAACAACCAGCTATGGACAATTCAAGTTGATGGAACAATTCGAACGATGGGAAAATGCTTAGTTCCCAATGGCCACGAACCTGGATCCTACACCATGATTGATGACTGCAACAAGGTTGATACACAGGACAAGACATGGAAATTATATCCCGATGGCACCCTCGTTCACGTATGGTCCGGCCTCGTCTTGACGGGTCAAGGAACGGGACCACACGCCATAACCACAATAGAAACTAACACATCCGCCCCAACACAAAGCTGGGGAACGGCGGACGATGGATCGCCCATTGTCGTCGCCATTGTAGGGCTTCGTCACATGTGCTTACAAGCGCAGAATGACAACGTCCATGTCTGGATGAATAGCTGCGTCAAAAACAACAGACAACAATATTGGGCAGTTTATAATGACGGTACAATTCGAACCAACTACAACACAAGCTTTTGCTTGAGTTCCACAGGCAAAGGTTTAAATGACGCTATTGGTTTAGCTAAATGTCAAGGGTTGCCTCAACAGCGGTGGGTGGCTAAGGAGGATGGCACCATCTTAAACCCCATCAATAATATGGTGATGGATGTGAAAGGGAGTGATCCTAATCTTCGCAAAATTATTCTCTTTGCTCCTACGGGTAACCCTAATCAGCAGTGGGTGTTCGTTACTCAATATAAACCCTAAATATGTGTAATGCAATGCATTGCATGCTTTAAATAATACTTGTATTGTATGGCGTAGTGTTGCTTACAAATAAAGAATAAATAAATGTGTGGTTTTTTTAATAACG

mRNA sequence

AATAATAATACTATGTCCACAGCAGACGTTGGATATGTTATTCACTGCTGATAGTTTTACAATACCATGGCCATTGCTATTACTATAAAAACATAGTGCAAGCTCAGGGATGGATCACACAATCACAAGATAGACGATGGAGATCAAGAAGATGACAATAGTTTTTCTTGTTGTAGTTTTAGCTGCTTCATTCACGGGGAACCACGATGTCTCAGCAGCTCGCACGATTGTCCTCAGTAGATCGACACATCTTGTTGGCCGAGACGGGCTATGTCTCGACGTGATCGGAGGGTACAGCGACAGCCATATTCCAACTCAACTATGGCCATGTGGACCTCAAAACAACCAGCTATGGACAATTCAAGTTGATGGAACAATTCGAACGATGGGAAAATGCTTAGTTCCCAATGGCCACGAACCTGGATCCTACACCATGATTGATGACTGCAACAAGGTTGATACACAGGACAAGACATGGAAATTATATCCCGATGGCACCCTCGTTCACGTATGGTCCGGCCTCGTCTTGACGGGTCAAGGAACGGGACCACACGCCATAACCACAATAGAAACTAACACATCCGCCCCAACACAAAGCTGGGGAACGGCGGACGATGGATCGCCCATTGTCGTCGCCATTGTAGGGCTTCGTCACATGTGCTTACAAGCGCAGAATGACAACGTCCATGTCTGGATGAATAGCTGCGTCAAAAACAACAGACAACAATATTGGGCAGTTTATAATGACGGTACAATTCGAACCAACTACAACACAAGCTTTTGCTTGAGTTCCACAGGCAAAGGTTTAAATGACGCTATTGGTTTAGCTAAATGTCAAGGGTTGCCTCAACAGCGGTGGGTGGCTAAGGAGGATGGCACCATCTTAAACCCCATCAATAATATGGTGATGGATGTGAAAGGGAGTGATCCTAATCTTCGCAAAATTATTCTCTTTGCTCCTACGGGTAACCCTAATCAGCAGTGGGTGTTCGTTACTCAATATAAACCCTAAATATGTGTAATGCAATGCATTGCATGCTTTAAATAATACTTGTATTGTATGGCGTAGTGTTGCTTACAAATAAAGAATAAATAAATGTGTGGTTTTTTTAATAACG

Coding sequence (CDS)

ATGGAGATCAAGAAGATGACAATAGTTTTTCTTGTTGTAGTTTTAGCTGCTTCATTCACGGGGAACCACGATGTCTCAGCAGCTCGCACGATTGTCCTCAGTAGATCGACACATCTTGTTGGCCGAGACGGGCTATGTCTCGACGTGATCGGAGGGTACAGCGACAGCCATATTCCAACTCAACTATGGCCATGTGGACCTCAAAACAACCAGCTATGGACAATTCAAGTTGATGGAACAATTCGAACGATGGGAAAATGCTTAGTTCCCAATGGCCACGAACCTGGATCCTACACCATGATTGATGACTGCAACAAGGTTGATACACAGGACAAGACATGGAAATTATATCCCGATGGCACCCTCGTTCACGTATGGTCCGGCCTCGTCTTGACGGGTCAAGGAACGGGACCACACGCCATAACCACAATAGAAACTAACACATCCGCCCCAACACAAAGCTGGGGAACGGCGGACGATGGATCGCCCATTGTCGTCGCCATTGTAGGGCTTCGTCACATGTGCTTACAAGCGCAGAATGACAACGTCCATGTCTGGATGAATAGCTGCGTCAAAAACAACAGACAACAATATTGGGCAGTTTATAATGACGGTACAATTCGAACCAACTACAACACAAGCTTTTGCTTGAGTTCCACAGGCAAAGGTTTAAATGACGCTATTGGTTTAGCTAAATGTCAAGGGTTGCCTCAACAGCGGTGGGTGGCTAAGGAGGATGGCACCATCTTAAACCCCATCAATAATATGGTGATGGATGTGAAAGGGAGTGATCCTAATCTTCGCAAAATTATTCTCTTTGCTCCTACGGGTAACCCTAATCAGCAGTGGGTGTTCGTTACTCAATATAAACCCTAA

Protein sequence

MEIKKMTIVFLVVVLAASFTGNHDVSAARTIVLSRSTHLVGRDGLCLDVIGGYSDSHIPTQLWPCGPQNNQLWTIQVDGTIRTMGKCLVPNGHEPGSYTMIDDCNKVDTQDKTWKLYPDGTLVHVWSGLVLTGQGTGPHAITTIETNTSAPTQSWGTADDGSPIVVAIVGLRHMCLQAQNDNVHVWMNSCVKNNRQQYWAVYNDGTIRTNYNTSFCLSSTGKGLNDAIGLAKCQGLPQQRWVAKEDGTILNPINNMVMDVKGSDPNLRKIILFAPTGNPNQQWVFVTQYKP
Homology
[Close]
BLAST of Bhi04G001654 vs. Swiss-Prot
Match: sp|P33183|NIGB_SAMNI (Nigrin b OS=Sambucus nigra OX=4202 PE=1 SV=2)

HSP 1 Score: 245.7 bits (626), Expect = 6.2e-64
Identity = 118/262 (45.04%), Postives = 156/262 (59.54%), Query Frame = 0 

Query: 30  TIVLSRSTHLVGRDGLCLDVIGGYSDSHIPTQLWPCGPQNNQLWTIQVDGTIRTMGKCLV 89
           T+  S + ++VGRDGLC+DV  GY     P QLWPCG Q NQ WT   D TIR+MGKC+ 
Sbjct: 303 TLRTSFTRNIVGRDGLCVDVRNGYDTDGTPLQLWPCGTQRNQRWTFDSDDTIRSMGKCMT 362

Query: 90  PNGHEPGSYTMIDDCNKVDTQDKTWKLYPDGTLVHVWSGLVLTGQGTGPHAITTIETNTS 149
            NG   GS  +I +C+        W++  DG++++  SGLV+T        I  +E N  
Sbjct: 363 ANGLNNGSNIVIFNCSTAAENAIKWEVPIDGSIINPSSGLVMTAPRAASRTILLLEDNIY 422

Query: 150 APTQSWGTADDGSPIVVAIVGLRHMCLQAQNDNVHVWMNSCVKNNRQQYWAVYNDGTIRT 209
           A +Q W   ++  PIV +IVG + MCLQ+  +N  VWM  C   + QQ WA+Y D TIR 
Sbjct: 423 AASQGWTVTNNVKPIVASIVGYKEMCLQSNGENNGVWMEDCEATSLQQQWALYGDRTIRV 482

Query: 210 NYNTSFCLSSTGKGLNDAIGLAKCQGLPQQRWVAKEDGTILNPINNMVMDVKGSDPNLRK 269
           N     C+++ G    D I + KCQGLP QRW    DG I+NP +  VMDV+ S+ +LR+
Sbjct: 483 NSTRGLCVTTNGYNSKDLIIILKCQGLPSQRWFFNSDGAIVNPKSRHVMDVRASNVSLRE 542

Query: 270 IILFAPTGNPNQQWVFVTQYKP 292
           II+F  TGNPNQQW  VTQ  P
Sbjct: 543 IIIFPATGNPNQQW--VTQVLP 562

[Close]
BLAST of Bhi04G001654 vs. Swiss-Prot
Match: sp|Q9M653|RIPT_POLML (Ribosome-inactivating protein PMRIPt OS=Polygonatum multiflorum OX=45371 GN=RIPt PE=1 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.2e-62
Identity = 118/254 (46.46%), Postives = 155/254 (61.02%), Query Frame = 0 

Query: 41  GRDGLCLDVIGGYSDSHIPTQLWPCGPQNNQLWTIQVDGTIRTMGKCLVPNGHEPGSYTM 100
           G DGLC+DV    ++  IP QLWPCG Q NQ WT   DGTI++MGKC+  NG+ PG Y M
Sbjct: 346 GLDGLCMDVRNESNNDGIPIQLWPCGAQRNQQWTFHTDGTIQSMGKCMTSNGYHPGDYVM 405

Query: 101 IDDCNKVDTQDKT-WKLYPDGTLVHVWSGLVLTGQGTGPHAITTIETNTSAPTQSWGTAD 160
           I +C+     D T W +  DG++ +  SGLVLT        I  +  NT +  Q     D
Sbjct: 406 IFNCSTAPVPDATKWVVSIDGSITNPHSGLVLTAPQAAQTTILLVVRNTHSAKQGRSVGD 465

Query: 161 DGSPIVVAIVGLRHMCLQAQND-NVHVWMNSCVKNNRQQYWAVYNDGTIRTNYNTSFCLS 220
           D  PIV  IVG ++MCLQ  N+ N  VW+  C  +  QQ+WA+Y+DGTIR + + S C++
Sbjct: 466 DVEPIVTYIVGFKYMCLQGNNENNTRVWLEDCAVDRPQQWWALYSDGTIRVDSDRSLCVT 525

Query: 221 STGKGLNDAIGLAKCQGLPQQRWVAKEDGTILNPINNMVMDVKGSDPNLRKIILFAPTGN 280
           S G    DAI +  C G   QR V   DGTILNP   +VMDV+ S+  LR+IIL+ PTGN
Sbjct: 526 SDGHSSRDAIIILTCDGGINQRLVFNTDGTILNPNAQLVMDVRQSNVALRQIILYQPTGN 585

Query: 281 PNQQWV-FVTQYKP 292
           PNQQW+  +T+ +P
Sbjct: 586 PNQQWMTMITRTRP 599

[Close]
BLAST of Bhi04G001654 vs. Swiss-Prot
Match: sp|Q41358|SNAIB_SAMNI (Ribosome-inactivating protein SNAI OS=Sambucus nigra OX=4202 GN=SNA-I PE=1 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 6.6e-58
Identity = 116/256 (45.31%), Postives = 148/256 (57.81%), Query Frame = 0 

Query: 32  VLSRSTHLVGRDGLCLDVIGGYSDSHIPTQLWPCGPQNNQLWTIQVDGTIRTMGKCLVPN 91
           V+  +  + G DGLC+DV  G+     P QL PCG + NQLWT + DGTIR +GKCL  +
Sbjct: 318 VVEVTRRISGWDGLCVDVRYGHYIDGNPVQLRPCGNECNQLWTFRTDGTIRWLGKCLTAS 377

Query: 92  GHEPGSYTMIDDCNKVDTQDKTWKLYPDGTLVHVWSGLVLTGQGTGPHAITTIETNTSAP 151
                S  MI DCN V  +   W +  DGT+ +  SGLVLT          ++E N  A 
Sbjct: 378 -----SSVMIYDCNTVPPEATKWVVSIDGTITNPHSGLVLTAPQAAEGTALSLENNIHAA 437

Query: 152 TQSWGTADDGSPIVVAIVGLRHMCLQAQNDNVHVWMNSCVKNNRQQYWAVYNDGTIRTNY 211
            Q W T  D  P+V  IVG + MCL+   +N  VW+  CV N  QQ WA+Y DGTIR N 
Sbjct: 438 RQGW-TVGDVEPLVTFIVGYKQMCLRENGENNFVWLEDCVLNRVQQEWALYGDGTIRVNS 497

Query: 212 NTSFCLSSTGKGLNDAIGLAKCQGLPQQRWVAKEDGTILNPINNMVMDVKGSDPNLRKII 271
           N S C++S     +D I + KC+G   QRWV   +GTI NP   ++MDV   D +LRKII
Sbjct: 498 NRSLCVTSEDHEPSDLIVILKCEGSGNQRWVFNTNGTISNPNAKLLMDVAQRDVSLRKII 557

Query: 272 LFAPTGNPNQQWVFVT 288
           L+ PTGNPNQQW+  T
Sbjct: 558 LYRPTGNPNQQWITTT 567

[Close]
BLAST of Bhi04G001654 vs. Swiss-Prot
Match: sp|O22415|SNAIF_SAMNI (Ribosome-inactivating protein SNAIf OS=Sambucus nigra OX=4202 GN=SNA-If PE=1 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 8.6e-58
Identity = 116/257 (45.14%), Postives = 148/257 (57.59%), Query Frame = 0 

Query: 32  VLSRSTHLVGRDGLCLDVIGGYSDSHIPTQLWPCGPQNNQLWTIQVDGTIRTMGKCLVPN 91
           V+  +  + G DGLC+DV  G+       QL PCG + NQLWT + DGTIR +GKCL  +
Sbjct: 318 VVEVTRRISGWDGLCVDVRDGHYIDGNTVQLGPCGNECNQLWTFRTDGTIRWLGKCLTTS 377

Query: 92  GHEPGSYTMIDDCNKVDTQDKTWKLYPDGTLVHVWSGLVLTGQGTGPHAITTIETNTSAP 151
                S  MI DCN V  +   W +  DGT+ +  SGLVLT          ++E N  A 
Sbjct: 378 -----SSVMIYDCNTVPPEATKWVVSTDGTITNPRSGLVLTAPQAAEGTALSLENNIHAA 437

Query: 152 TQSWGTADDGSPIVVAIVGLRHMCLQAQNDNVHVWMNSCVKNNRQQYWAVYNDGTIRTNY 211
            Q W T  D  P+V  IVG + MCL    +N  VW+  CV N  +Q WA+Y DGTIR N 
Sbjct: 438 RQGW-TVGDVEPLVTFIVGYKQMCLTENGENNFVWLEDCVLNRVEQEWALYGDGTIRVNS 497

Query: 212 NTSFCLSSTGKGLNDAIGLAKCQGLPQQRWVAKEDGTILNPINNMVMDVKGSDPNLRKII 271
           N S C++S     +D I + KC+G   QRWV   +GTI NP   +VMDV  S+ +LRKII
Sbjct: 498 NRSLCVTSEDHEPSDLIVILKCEGSGNQRWVFNTNGTISNPNAKLVMDVAQSNVSLRKII 557

Query: 272 LFAPTGNPNQQWVFVTQ 289
           L+ PTGNPNQQW+  TQ
Sbjct: 558 LYPPTGNPNQQWITTTQ 568

[Close]
BLAST of Bhi04G001654 vs. Swiss-Prot
Match: sp|P02879|RICI_RICCO (Ricin OS=Ricinus communis OX=3988 PE=1 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 6.0e-51
Identity = 101/249 (40.56%), Postives = 141/249 (56.63%), Query Frame = 0 

Query: 39  LVGRDGLCLDVIGGYSDSHIPTQLWPC--GPQNNQLWTIQVDGTIRTMGKCLVPNGHEPG 98
           +VGR+GLC+DV  G   +    QLWPC      NQLWT++ D TIR+ GKCL   G+ PG
Sbjct: 327 IVGRNGLCVDVRDGRFHNGNAIQLWPCKSNTDANQLWTLKRDNTIRSNGKCLTTYGYSPG 386

Query: 99  SYTMIDDCNKVDTQDKTWKLYPDGTLVHVWSGLVLTGQGTGPHAITTIETNTSAPTQSWG 158
            Y MI DCN   T    W+++ +GT+++  S LVL           T++TN  A +Q W 
Sbjct: 387 VYVMIYDCNTAATDATRWQIWDNGTIINPRSSLVLAATSGNSGTTLTVQTNIYAVSQGWL 446

Query: 159 TADDGSPIVVAIVGLRHMCLQAQNDNVHVWMNSCVKNNRQQYWAVYNDGTIRTNYNTSFC 218
             ++  P V  IVGL  +CLQA +    VW+  C     +Q WA+Y DG+IR   N   C
Sbjct: 447 PTNNTQPFVTTIVGLYGLCLQANSG--QVWIEDCSSEKAEQQWALYADGSIRPQQNRDNC 506

Query: 219 LSSTGKGLNDAIGLAKC-QGLPQQRWVAKEDGTILNPINNMVMDVKGSDPNLRKIILFAP 278
           L+S        + +  C      QRW+ K DGTILN  + +V+DV+ SDP+L++IIL+  
Sbjct: 507 LTSDSNIRETVVKILSCGPASSGQRWMFKNDGTILNLYSGLVLDVRASDPSLKQIILYPL 566

Query: 279 TGNPNQQWV 285
            G+PNQ W+
Sbjct: 567 HGDPNQIWL 573

[Close]
BLAST of Bhi04G001654 vs. TrEMBL
Match: tr|A0A1S4E5V9|A0A1S4E5V9_CUCME (nigrin b-like OS=Cucumis melo OX=3656 GN=LOC107992255 PE=4 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 2.2e-127
Identity = 222/291 (76.29%), Postives = 236/291 (81.10%), Query Frame = 0 

Query: 1   MEIKKMTIVFLVVVLAASFTGNHDVSAARTIVLSRSTHLVGRDGLCLDVIGGYSDSHIPT 60
           MEIK  TI+F+ VVLAAS TG H+VSAAR IVLSRSTHLVG+DGLCLDVIGGYSD+H+PT
Sbjct: 1   MEIKSTTIIFVCVVLAASLTGIHNVSAARAIVLSRSTHLVGQDGLCLDVIGGYSDNHVPT 60

Query: 61  QLWPCGPQNNQLWTIQVDGTIRTMGKCLVPNGHEPGSYTMIDDCNKVDTQDKTWKLYPDG 120
           QLWPCGPQNNQLWTIQ DGTIRTMGKCLVPNGH+PGSYTMIDDCNK D            
Sbjct: 61  QLWPCGPQNNQLWTIQADGTIRTMGKCLVPNGHDPGSYTMIDDCNKADPXXXXXXXXXXX 120

Query: 121 TLVHVWSGLVLTGQGTGPHAITTIETNTSAPTQSWGTADDGSPIVVAIVGLRHMCLQAQN 180
                                      TSAPTQSWGTADDGSPIVVAIVGLR MCLQAQN
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXTSAPTQSWGTADDGSPIVVAIVGLRRMCLQAQN 180

Query: 181 DNVHVWMNSCVKNNRQQYWAVYNDGTIRTNYNTSFCLSSTGKGLNDAIGLAKCQGLPQQR 240
           DN+HVWMNSCVKNNRQQYWAV++DGTIR NYNTSFCLSSTGKG NDAI LAKC+GLPQQR
Sbjct: 181 DNIHVWMNSCVKNNRQQYWAVFSDGTIRANYNTSFCLSSTGKGSNDAIVLAKCEGLPQQR 240

Query: 241 WVAKEDGTILNPINNMVMDVKGSDPNLRKIILFAPTGNPNQQWVFVTQYKP 292
           WVAKEDGTIL+   N+VMDVKGSDPNLRKIILFAPTGNPNQ W+FVTQYKP
Sbjct: 241 WVAKEDGTILSLSTNLVMDVKGSDPNLRKIILFAPTGNPNQHWMFVTQYKP 291

[Close]
BLAST of Bhi04G001654 vs. TrEMBL
Match: tr|Q945S4|Q945S4_SAMNI (Lectin OS=Sambucus nigra OX=4202 GN=AIVl1 PE=2 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 2.3e-63
Identity = 117/254 (46.06%), Postives = 155/254 (61.02%), Query Frame = 0 

Query: 38  HLVGRDGLCLDVIGGYSDSHIPTQLWPCGPQNNQLWTIQVDGTIRTMGKCLVPNGHEPGS 97
           ++VGRDGLC+DV  GY     P QLWPCG Q NQ WT   D TIR+MGKC+  NG   GS
Sbjct: 64  NIVGRDGLCVDVRNGYDTDGTPIQLWPCGTQRNQQWTFHTDDTIRSMGKCMTANGLNNGS 123

Query: 98  YTMIDDCNKVDTQDKTWKLYPDGTLVHVWSGLVLTGQGTGPHAITTIETNTSAPTQSWGT 157
             MI +C+        W++  DG++++ +SGLV+T        I  ++ N  A +Q W  
Sbjct: 124 NIMIFNCSTAVENAIKWEVTIDGSIINPFSGLVITAPSAASRTILLLQNNIYAASQGWTV 183

Query: 158 ADDGSPIVVAIVGLRHMCLQAQNDNVHVWMNSCVKNNRQQYWAVYNDGTIRTNYNTSFCL 217
           +++  PIV +IVG R MCLQA  +N  VWM  C   + QQ WA++ D TIR N N   C+
Sbjct: 184 SNNVQPIVASIVGFREMCLQANGENNGVWMEDCEATSLQQQWALFGDRTIRVNSNRGLCV 243

Query: 218 SSTGKGLNDAIGLAKCQGLPQQRWVAKEDGTILNPINNMVMDVKGSDPNLRKIILFAPTG 277
           ++ G    D I + KCQGLP QRW    DG I+NP + +VMDVK S+ +LR+II++  TG
Sbjct: 244 TTNGYNSRDLIIILKCQGLPSQRWFFNSDGAIVNPKSKLVMDVKSSNVSLREIIIYPATG 303

Query: 278 NPNQQWVFVTQYKP 292
            PNQQW  VTQ  P
Sbjct: 304 RPNQQW--VTQVLP 315

[Close]
BLAST of Bhi04G001654 vs. TrEMBL
Match: tr|Q58A87|Q58A87_SAMRA (Lectin OS=Sambucus racemosa subsp. sieboldiana OX=45463 GN=LecSSA-b-3c PE=2 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 3.0e-63
Identity = 117/254 (46.06%), Postives = 158/254 (62.20%), Query Frame = 0 

Query: 38  HLVGRDGLCLDVIGGYSDSHIPTQLWPCGPQNNQLWTIQVDGTIRTMGKCLVPNGHEPGS 97
           +++GR+GLC+DV  GYS    P QLWPCG Q NQ WT   DGTIR+MGKC+  NG   GS
Sbjct: 21  NIIGRNGLCVDVRNGYSTDGTPIQLWPCGRQRNQQWTFYEDGTIRSMGKCMTANGLNSGS 80

Query: 98  YTMIDDCNKVDTQDKTWKLYPDGTLVHVWSGLVLTGQGTGPHAITTIETNTSAPTQSWGT 157
             MI +C+        W++  DG+++++ SGLV+T        I  +E N  A +Q W  
Sbjct: 81  NIMIFNCSTAVENAIKWEVTIDGSIINLSSGLVMTAPSAASRTILLLENNIYAASQGWTV 140

Query: 158 ADDGSPIVVAIVGLRHMCLQAQNDNVHVWMNSCVKNNRQQYWAVYNDGTIRTNYNTSFCL 217
           ++D  PIV +IVG + MCLQA  +N  VWM  C   + QQ WA++ D TIR N +   C+
Sbjct: 141 SNDVKPIVASIVGYKEMCLQANGENNGVWMEDCEVTSLQQQWALFGDRTIRVNSSRGLCV 200

Query: 218 SSTGKGLNDAIGLAKCQGLPQQRWVAKEDGTILNPINNMVMDVKGSDPNLRKIILFAPTG 277
           +S G    D I + KCQGLP QRW    +G I+NP + +VMDV+ S+ +LR+II++  TG
Sbjct: 201 TSNGYNSKDLIIILKCQGLPTQRWFFNSNGAIVNPNSTLVMDVRASNVSLREIIIYPATG 260

Query: 278 NPNQQWVFVTQYKP 292
           NPNQQW  VTQ  P
Sbjct: 261 NPNQQW--VTQVLP 272

[Close]
BLAST of Bhi04G001654 vs. TrEMBL
Match: tr|Q8GTA5|Q8GTA5_SAMNI (Monomeric lectin SNAlm OS=Sambucus nigra OX=4202 PE=2 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 6.6e-63
Identity = 117/254 (46.06%), Postives = 154/254 (60.63%), Query Frame = 0 

Query: 38  HLVGRDGLCLDVIGGYSDSHIPTQLWPCGPQNNQLWTIQVDGTIRTMGKCLVPNGHEPGS 97
           ++VGRDGLC+DV  GY     P QLWPCG Q NQ WT   D TIR+MGKC+  NG   GS
Sbjct: 64  NIVGRDGLCVDVRNGYDTDGTPIQLWPCGTQRNQQWTFHTDDTIRSMGKCMTANGLNNGS 123

Query: 98  YTMIDDCNKVDTQDKTWKLYPDGTLVHVWSGLVLTGQGTGPHAITTIETNTSAPTQSWGT 157
             MI +C+        W++  DG++++  SGLV+T        I  ++ N  A +Q W  
Sbjct: 124 NIMIFNCSTAVENAIKWEVTIDGSIINPSSGLVITAPSAASRTILLLQNNIYAASQGWTV 183

Query: 158 ADDGSPIVVAIVGLRHMCLQAQNDNVHVWMNSCVKNNRQQYWAVYNDGTIRTNYNTSFCL 217
           +++  PIV +IVG R MCLQA  +N  VWM  C   + QQ WA++ D TIR N N   C+
Sbjct: 184 SNNVQPIVASIVGFREMCLQANGENNGVWMEDCEATSLQQQWALFGDRTIRVNSNRGLCV 243

Query: 218 SSTGKGLNDAIGLAKCQGLPQQRWVAKEDGTILNPINNMVMDVKGSDPNLRKIILFAPTG 277
           ++ G    D I + KCQGLP QRW    DG I+NP + +VMDVK S+ +LR+II++  TG
Sbjct: 244 TTNGYNSRDLIIILKCQGLPSQRWFFNSDGAIVNPKSKLVMDVKSSNVSLREIIIYPATG 303

Query: 278 NPNQQWVFVTQYKP 292
            PNQQW  VTQ  P
Sbjct: 304 RPNQQW--VTQVLP 315

[Close]
BLAST of Bhi04G001654 vs. TrEMBL
Match: tr|Q58A88|Q58A88_SAMRA (Lectin OS=Sambucus racemosa subsp. sieboldiana OX=45463 GN=LecSSA-b-3b PE=2 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.1e-62
Identity = 117/254 (46.06%), Postives = 157/254 (61.81%), Query Frame = 0 

Query: 38  HLVGRDGLCLDVIGGYSDSHIPTQLWPCGPQNNQLWTIQVDGTIRTMGKCLVPNGHEPGS 97
           +++GR+GLC+DV  GYS    P QLWPCG Q NQ WT   DGTIR+MGKC+  NG   GS
Sbjct: 21  NIIGRNGLCVDVRNGYSTDGTPIQLWPCGRQRNQQWTFYEDGTIRSMGKCMTANGLNSGS 80

Query: 98  YTMIDDCNKVDTQDKTWKLYPDGTLVHVWSGLVLTGQGTGPHAITTIETNTSAPTQSWGT 157
             MI +C+        W++  DG+++++ SGLV+T        I  +E N  A +Q W  
Sbjct: 81  NIMIFNCSTAVENAIKWEVTIDGSIINLSSGLVMTAPSAASRTILLLENNIYAASQGWTV 140

Query: 158 ADDGSPIVVAIVGLRHMCLQAQNDNVHVWMNSCVKNNRQQYWAVYNDGTIRTNYNTSFCL 217
           ++D  PIV +IVG + MCLQA  +N  VWM  C   + QQ WA++ D TIR N +   C+
Sbjct: 141 SNDVKPIVASIVGYKEMCLQANVENNGVWMEDCEVTSLQQQWALFGDRTIRVNSSRGLCV 200

Query: 218 SSTGKGLNDAIGLAKCQGLPQQRWVAKEDGTILNPINNMVMDVKGSDPNLRKIILFAPTG 277
           +S G    D I   KCQGLP QRW    +G I+NP + +VMDV+ S+ +LR+II++  TG
Sbjct: 201 TSNGYNSKDLIITLKCQGLPSQRWFFNSNGAIVNPNSTLVMDVRASNVSLREIIIYPATG 260

Query: 278 NPNQQWVFVTQYKP 292
           NPNQQW  VTQ  P
Sbjct: 261 NPNQQW--VTQVLP 272

[Close]
BLAST of Bhi04G001654 vs. NCBI nr
Match: XP_022150387.1 (nigrin b-like [Momordica charantia] >XP_022156716.1 nigrin b-like [Momordica charantia])

HSP 1 Score: 466.8 bits (1200), Expect = 5.2e-128
Identity = 222/285 (77.89%), Postives = 240/285 (84.21%), Query Frame = 0 

Query: 1   MEIKKMTIVFLVVVLAASFTGNHDVSAARTIVLSRSTHLVGRDGLCLDVIGGYSDSHIPT 60
           ME K MTIV L +VLAAS  G H VSAA TIV SRSTH+VGRDGLCLDVIGGY+D+HIPT
Sbjct: 1   MEKKMMTIV-LCLVLAASLVGIHHVSAAHTIVFSRSTHIVGRDGLCLDVIGGYNDNHIPT 60

Query: 61  QLWPCGPQNNQLWTIQVDGTIRTMGKCLVPNGHEPGSYTMIDDCNKVDTQDKTWKLYPDG 120
           QLW C PQN+QLWTIQ DGTIR+MGKCLVPNG  PGSYTMIDDCN  +  DKTWKLYPDG
Sbjct: 61  QLWTCNPQNHQLWTIQTDGTIRSMGKCLVPNGRSPGSYTMIDDCNDANPDDKTWKLYPDG 120

Query: 121 TLVHVWSGLVLTGQGTGPHAITTIETNTSAPTQSWGTADDGSPIVVAIVGLRHMCLQAQN 180
           TL HV SGLVLT Q TGPH ITTIETNT A  QSW T DDG+PIV  IVGLR MCLQAQN
Sbjct: 121 TLAHVRSGLVLTAQATGPHTITTIETNTYAAMQSWTTGDDGTPIVTTIVGLRRMCLQAQN 180

Query: 181 DNVHVWMNSCVKNNRQQYWAVYNDGTIRTNYNTSFCLSSTGKGLNDAIGLAKCQGLPQQR 240
           DNVHV MNSC+KNNRQQYWA+Y DGTIR N+NTS C+S TGKG NDAI LAKC+G PQQR
Sbjct: 181 DNVHVSMNSCMKNNRQQYWALYGDGTIRANFNTSLCMSGTGKGSNDAIVLAKCEGSPQQR 240

Query: 241 WVAKEDGTILNPINNMVMDVKGSDPNLRKIILFAPTGNPNQQWVF 286
           W+AKEDGTILN   N+VMDVKGSDPNLR+IILF  TGNPNQQW++
Sbjct: 241 WLAKEDGTILNLNTNLVMDVKGSDPNLRQIILFGRTGNPNQQWIW 284

[Close]
BLAST of Bhi04G001654 vs. NCBI nr
Match: XP_016903609.1 (PREDICTED: nigrin b-like [Cucumis melo])

HSP 1 Score: 464.2 bits (1193), Expect = 3.4e-127
Identity = 222/291 (76.29%), Postives = 236/291 (81.10%), Query Frame = 0 

Query: 1   MEIKKMTIVFLVVVLAASFTGNHDVSAARTIVLSRSTHLVGRDGLCLDVIGGYSDSHIPT 60
           MEIK  TI+F+ VVLAAS TG H+VSAAR IVLSRSTHLVG+DGLCLDVIGGYSD+H+PT
Sbjct: 1   MEIKSTTIIFVCVVLAASLTGIHNVSAARAIVLSRSTHLVGQDGLCLDVIGGYSDNHVPT 60

Query: 61  QLWPCGPQNNQLWTIQVDGTIRTMGKCLVPNGHEPGSYTMIDDCNKVDTQDKTWKLYPDG 120
           QLWPCGPQNNQLWTIQ DGTIRTMGKCLVPNGH+PGSYTMIDDCNK D            
Sbjct: 61  QLWPCGPQNNQLWTIQADGTIRTMGKCLVPNGHDPGSYTMIDDCNKADPXXXXXXXXXXX 120

Query: 121 TLVHVWSGLVLTGQGTGPHAITTIETNTSAPTQSWGTADDGSPIVVAIVGLRHMCLQAQN 180
                                      TSAPTQSWGTADDGSPIVVAIVGLR MCLQAQN
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXTSAPTQSWGTADDGSPIVVAIVGLRRMCLQAQN 180

Query: 181 DNVHVWMNSCVKNNRQQYWAVYNDGTIRTNYNTSFCLSSTGKGLNDAIGLAKCQGLPQQR 240
           DN+HVWMNSCVKNNRQQYWAV++DGTIR NYNTSFCLSSTGKG NDAI LAKC+GLPQQR
Sbjct: 181 DNIHVWMNSCVKNNRQQYWAVFSDGTIRANYNTSFCLSSTGKGSNDAIVLAKCEGLPQQR 240

Query: 241 WVAKEDGTILNPINNMVMDVKGSDPNLRKIILFAPTGNPNQQWVFVTQYKP 292
           WVAKEDGTIL+   N+VMDVKGSDPNLRKIILFAPTGNPNQ W+FVTQYKP
Sbjct: 241 WVAKEDGTILSLSTNLVMDVKGSDPNLRKIILFAPTGNPNQHWMFVTQYKP 291

[Close]
BLAST of Bhi04G001654 vs. NCBI nr
Match: AAL04119.1 (lectin [Sambucus nigra])

HSP 1 Score: 251.5 bits (641), Expect = 3.4e-63
Identity = 117/254 (46.06%), Postives = 155/254 (61.02%), Query Frame = 0 

Query: 38  HLVGRDGLCLDVIGGYSDSHIPTQLWPCGPQNNQLWTIQVDGTIRTMGKCLVPNGHEPGS 97
           ++VGRDGLC+DV  GY     P QLWPCG Q NQ WT   D TIR+MGKC+  NG   GS
Sbjct: 64  NIVGRDGLCVDVRNGYDTDGTPIQLWPCGTQRNQQWTFHTDDTIRSMGKCMTANGLNNGS 123

Query: 98  YTMIDDCNKVDTQDKTWKLYPDGTLVHVWSGLVLTGQGTGPHAITTIETNTSAPTQSWGT 157
             MI +C+        W++  DG++++ +SGLV+T        I  ++ N  A +Q W  
Sbjct: 124 NIMIFNCSTAVENAIKWEVTIDGSIINPFSGLVITAPSAASRTILLLQNNIYAASQGWTV 183

Query: 158 ADDGSPIVVAIVGLRHMCLQAQNDNVHVWMNSCVKNNRQQYWAVYNDGTIRTNYNTSFCL 217
           +++  PIV +IVG R MCLQA  +N  VWM  C   + QQ WA++ D TIR N N   C+
Sbjct: 184 SNNVQPIVASIVGFREMCLQANGENNGVWMEDCEATSLQQQWALFGDRTIRVNSNRGLCV 243

Query: 218 SSTGKGLNDAIGLAKCQGLPQQRWVAKEDGTILNPINNMVMDVKGSDPNLRKIILFAPTG 277
           ++ G    D I + KCQGLP QRW    DG I+NP + +VMDVK S+ +LR+II++  TG
Sbjct: 244 TTNGYNSRDLIIILKCQGLPSQRWFFNSDGAIVNPKSKLVMDVKSSNVSLREIIIYPATG 303

Query: 278 NPNQQWVFVTQYKP 292
            PNQQW  VTQ  P
Sbjct: 304 RPNQQW--VTQVLP 315

[Close]
BLAST of Bhi04G001654 vs. NCBI nr
Match: BAD93342.1 (lectin [Sambucus racemosa subsp. sieboldiana])

HSP 1 Score: 251.1 bits (640), Expect = 4.5e-63
Identity = 117/254 (46.06%), Postives = 158/254 (62.20%), Query Frame = 0 

Query: 38  HLVGRDGLCLDVIGGYSDSHIPTQLWPCGPQNNQLWTIQVDGTIRTMGKCLVPNGHEPGS 97
           +++GR+GLC+DV  GYS    P QLWPCG Q NQ WT   DGTIR+MGKC+  NG   GS
Sbjct: 21  NIIGRNGLCVDVRNGYSTDGTPIQLWPCGRQRNQQWTFYEDGTIRSMGKCMTANGLNSGS 80

Query: 98  YTMIDDCNKVDTQDKTWKLYPDGTLVHVWSGLVLTGQGTGPHAITTIETNTSAPTQSWGT 157
             MI +C+        W++  DG+++++ SGLV+T        I  +E N  A +Q W  
Sbjct: 81  NIMIFNCSTAVENAIKWEVTIDGSIINLSSGLVMTAPSAASRTILLLENNIYAASQGWTV 140

Query: 158 ADDGSPIVVAIVGLRHMCLQAQNDNVHVWMNSCVKNNRQQYWAVYNDGTIRTNYNTSFCL 217
           ++D  PIV +IVG + MCLQA  +N  VWM  C   + QQ WA++ D TIR N +   C+
Sbjct: 141 SNDVKPIVASIVGYKEMCLQANGENNGVWMEDCEVTSLQQQWALFGDRTIRVNSSRGLCV 200

Query: 218 SSTGKGLNDAIGLAKCQGLPQQRWVAKEDGTILNPINNMVMDVKGSDPNLRKIILFAPTG 277
           +S G    D I + KCQGLP QRW    +G I+NP + +VMDV+ S+ +LR+II++  TG
Sbjct: 201 TSNGYNSKDLIIILKCQGLPTQRWFFNSNGAIVNPNSTLVMDVRASNVSLREIIIYPATG 260

Query: 278 NPNQQWVFVTQYKP 292
           NPNQQW  VTQ  P
Sbjct: 261 NPNQQW--VTQVLP 272

[Close]
BLAST of Bhi04G001654 vs. NCBI nr
Match: AAN86132.1 (monomeric lectin SNAlm precursor [Sambucus nigra])

HSP 1 Score: 250.0 bits (637), Expect = 1.0e-62
Identity = 117/254 (46.06%), Postives = 154/254 (60.63%), Query Frame = 0 

Query: 38  HLVGRDGLCLDVIGGYSDSHIPTQLWPCGPQNNQLWTIQVDGTIRTMGKCLVPNGHEPGS 97
           ++VGRDGLC+DV  GY     P QLWPCG Q NQ WT   D TIR+MGKC+  NG   GS
Sbjct: 64  NIVGRDGLCVDVRNGYDTDGTPIQLWPCGTQRNQQWTFHTDDTIRSMGKCMTANGLNNGS 123

Query: 98  YTMIDDCNKVDTQDKTWKLYPDGTLVHVWSGLVLTGQGTGPHAITTIETNTSAPTQSWGT 157
             MI +C+        W++  DG++++  SGLV+T        I  ++ N  A +Q W  
Sbjct: 124 NIMIFNCSTAVENAIKWEVTIDGSIINPSSGLVITAPSAASRTILLLQNNIYAASQGWTV 183

Query: 158 ADDGSPIVVAIVGLRHMCLQAQNDNVHVWMNSCVKNNRQQYWAVYNDGTIRTNYNTSFCL 217
           +++  PIV +IVG R MCLQA  +N  VWM  C   + QQ WA++ D TIR N N   C+
Sbjct: 184 SNNVQPIVASIVGFREMCLQANGENNGVWMEDCEATSLQQQWALFGDRTIRVNSNRGLCV 243

Query: 218 SSTGKGLNDAIGLAKCQGLPQQRWVAKEDGTILNPINNMVMDVKGSDPNLRKIILFAPTG 277
           ++ G    D I + KCQGLP QRW    DG I+NP + +VMDVK S+ +LR+II++  TG
Sbjct: 244 TTNGYNSRDLIIILKCQGLPSQRWFFNSDGAIVNPKSKLVMDVKSSNVSLREIIIYPATG 303

Query: 278 NPNQQWVFVTQYKP 292
            PNQQW  VTQ  P
Sbjct: 304 RPNQQW--VTQVLP 315

The following BLAST results are available for this feature:
BLAST of Bhi04G001654 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P33183|NIGB_SAMNI6.2e-6445.04Nigrin b OS=Sambucus nigra OX=4202 PE=1 SV=2[more]
sp|Q9M653|RIPT_POLML1.2e-6246.46Ribosome-inactivating protein PMRIPt OS=Polygonatum multiflorum OX=45371 GN=RIPt... [more]
sp|Q41358|SNAIB_SAMNI6.6e-5845.31Ribosome-inactivating protein SNAI OS=Sambucus nigra OX=4202 GN=SNA-I PE=1 SV=1[more]
sp|O22415|SNAIF_SAMNI8.6e-5845.14Ribosome-inactivating protein SNAIf OS=Sambucus nigra OX=4202 GN=SNA-If PE=1 SV=... [more]
sp|P02879|RICI_RICCO6.0e-5140.56Ricin OS=Ricinus communis OX=3988 PE=1 SV=1[more]
BLAST of Bhi04G001654 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi04G001654 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4E5V9|A0A1S4E5V9_CUCME2.2e-12776.29nigrin b-like OS=Cucumis melo OX=3656 GN=LOC107992255 PE=4 SV=1[more]
tr|Q945S4|Q945S4_SAMNI2.3e-6346.06Lectin OS=Sambucus nigra OX=4202 GN=AIVl1 PE=2 SV=1[more]
tr|Q58A87|Q58A87_SAMRA3.0e-6346.06Lectin OS=Sambucus racemosa subsp. sieboldiana OX=45463 GN=LecSSA-b-3c PE=2 SV=1[more]
tr|Q8GTA5|Q8GTA5_SAMNI6.6e-6346.06Monomeric lectin SNAlm OS=Sambucus nigra OX=4202 PE=2 SV=1[more]
tr|Q58A88|Q58A88_SAMRA1.1e-6246.06Lectin OS=Sambucus racemosa subsp. sieboldiana OX=45463 GN=LecSSA-b-3b PE=2 SV=1[more]
BLAST of Bhi04G001654 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022150387.15.2e-12877.89nigrin b-like [Momordica charantia] >XP_022156716.1 nigrin b-like [Momordica cha... [more]
XP_016903609.13.4e-12776.29PREDICTED: nigrin b-like [Cucumis melo][more]
AAL04119.13.4e-6346.06lectin [Sambucus nigra][more]
BAD93342.14.5e-6346.06lectin [Sambucus racemosa subsp. sieboldiana][more]
AAN86132.11.0e-6246.06monomeric lectin SNAlm precursor [Sambucus nigra][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR035992Ricin_B-like_lectins
IPR000772Ricin_B_lectin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0017148 negative regulation of translation
molecular_function GO:0030598 rRNA N-glycosylase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi04M001654Bhi04M001654mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000772Ricin B, lectin domainSMARTSM00458ricin_3coord: 162..286
e-value: 3.0E-26
score: 103.2
coord: 29..158
e-value: 1.1E-13
score: 61.5
IPR000772Ricin B, lectin domainPFAMPF00652Ricin_B_lectincoord: 37..155
e-value: 1.8E-18
score: 66.9
coord: 167..283
e-value: 3.9E-22
score: 78.8
IPR000772Ricin B, lectin domainPROSITEPS50231RICIN_B_LECTINcoord: 162..286
score: 31.2
IPR000772Ricin B, lectin domainPROSITEPS50231RICIN_B_LECTINcoord: 29..158
score: 25.386
IPR000772Ricin B, lectin domainCDDcd00161RICINcoord: 38..155
e-value: 9.2123E-16
score: 70.6122
IPR000772Ricin B, lectin domainCDDcd00161RICINcoord: 168..285
e-value: 3.42004E-22
score: 88.7166
NoneNo IPR availableGENE3DG3DSA:2.80.10.50coord: 30..160
e-value: 5.3E-29
score: 103.1
NoneNo IPR availableGENE3DG3DSA:2.80.10.50coord: 163..287
e-value: 9.3E-41
score: 140.4
IPR035992Ricin B-like lectinsSUPERFAMILYSSF50370Ricin B-like lectinscoord: 162..285
IPR035992Ricin B-like lectinsSUPERFAMILYSSF50370Ricin B-like lectinscoord: 37..155