Bhi04G001551 (gene) Wax gourd

NameBhi04G001551
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr4 : 49640943 .. 49641230 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGTTGGTACAATGGGAGATGAAGAATGGATTCCGGTGACATATGAAAAATTGCCTGATTTCTTTTACGGGTTTGGAAATATAGGGCACCTGATGAAAGTTTGCGAAGAAACTACCCAAGAAGAAGGGTCCAAACCTCAATTTGGCCTGCAGTTATGGGAGTTTGGTTTCTCTAAAGGGATGAAGAAGGAAAAAAGAGGAGTTACACCAAACAAATATGGGAAAAATGGTGTGCGTGGTATTCGAGTAAATGGTAACAACGAAGACAATGGGTCGAATGGATAA

mRNA sequence

ATGAAGGTTGGTACAATGGGAGATGAAGAATGGATTCCGGTGACATATGAAAAATTGCCTGATTTCTTTTACGGGTTTGGAAATATAGGGCACCTGATGAAAGTTTGCGAAGAAACTACCCAAGAAGAAGGGTCCAAACCTCAATTTGGCCTGCAGTTATGGGAGTTTGGTTTCTCTAAAGGGATGAAGAAGGAAAAAAGAGGAGTTACACCAAACAAATATGGGAAAAATGGTGTGCGTGGTATTCGAGTAAATGGTAACAACGAAGACAATGGGTCGAATGGATAA

Coding sequence (CDS)

ATGAAGGTTGGTACAATGGGAGATGAAGAATGGATTCCGGTGACATATGAAAAATTGCCTGATTTCTTTTACGGGTTTGGAAATATAGGGCACCTGATGAAAGTTTGCGAAGAAACTACCCAAGAAGAAGGGTCCAAACCTCAATTTGGCCTGCAGTTATGGGAGTTTGGTTTCTCTAAAGGGATGAAGAAGGAAAAAAGAGGAGTTACACCAAACAAATATGGGAAAAATGGTGTGCGTGGTATTCGAGTAAATGGTAACAACGAAGACAATGGGTCGAATGGATAA

Protein sequence

MKVGTMGDEEWIPVTYEKLPDFFYGFGNIGHLMKVCEETTQEEGSKPQFGLQLWEFGFSKGMKKEKRGVTPNKYGKNGVRGIRVNGNNEDNGSNG
BLAST of Bhi04G001551 vs. TrEMBL
Match: tr|A0A0A0LNB5|A0A0A0LNB5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G427330 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 6.6e-04
Identity = 22/46 (47.83%), Postives = 30/46 (65.22%), Query Frame = 0

Query: 1   MKVGTMGDEEWIPVTYEKLPDFFYGFGNIGHLMKVCEETTQEEGSK 47
           +K+G M  E+ IPVTYEKL DF Y  G +GH+++ CE   +  G K
Sbjct: 78  IKLGAMAKEKCIPVTYEKLSDFCYNCGILGHVLQECEVKVEGPGYK 123

BLAST of Bhi04G001551 vs. NCBI nr
Match: KGN63308.1 (hypothetical protein Csa_2G427330 [Cucumis sativus])

HSP 1 Score: 52.4 bits (124), Expect = 1.0e-03
Identity = 22/46 (47.83%), Postives = 30/46 (65.22%), Query Frame = 0

Query: 1   MKVGTMGDEEWIPVTYEKLPDFFYGFGNIGHLMKVCEETTQEEGSK 47
           +K+G M  E+ IPVTYEKL DF Y  G +GH+++ CE   +  G K
Sbjct: 78  IKLGAMAKEKCIPVTYEKLSDFCYNCGILGHVLQECEVKVEGPGYK 123

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LNB5|A0A0A0LNB5_CUCSA6.6e-0447.83Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G427330 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KGN63308.11.0e-0347.83hypothetical protein Csa_2G427330 [Cucumis sativus][more]

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi04M001551Bhi04M001551mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..95

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None