Bhi04G001550 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi04G001550
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Transposon protein, putative, Mutator sub-class
Location	chr4 : 49637091 .. 49637473 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTGGAAAGCCATTGCAGATATTGTGATGAGGGAGGATTTTAATATAAACATCTCAAAGCATCAAGCATACAGAGCAAAGAAGATGATAATGGAAAAGCTATGGGATTATTGTGAGGAATTGAGGAAAACTAATCCAGGAAGTACTTACAAAGTGTTGATAGACCTCAAATTCATATGCAACATATTTCTTGAAGTCTGTATATTTGTCTCAGAGCATGTAATGACAGCTTTTTGCACGGTTGTAGACCAATAATTGGGCTTGATGGATGTCATTTGAAGGATGCATGTCATGGAAAATTGTTAAGTATTGTGGTAATAGATGCAAATGATGGAATTTTTCCATTAGCCTTGGCTACGGTGGATGTGGAGTCCAAATAA

mRNA sequence

ATGGATTGGAAAGCCATTGCAGATATTGTGATGAGGGAGGATTTTAATATAAACATCTCAAAGCATCAAGCATACAGAGCAAAGAAGATGATAATGGAAAAGCTATGGGATTATTGTGAGGAATTGAGGAAAACTAATCCAGGAAGTACTTACAAAGTGTTGATAGACCTCAAATTCATATGCAACATATTTCTTGAAGTCTGTATATTTGTCTCAGAGCATGTAATGACAGCTTTTTGCACGGTTGATGCATGTCATGGAAAATTGTTAAGTATTGTGGTAATAGATGCAAATGATGGAATTTTTCCATTAGCCTTGGCTACGGTGGATGTGGAGTCCAAATAA

Coding sequence (CDS)

ATGGATTGGAAAGCCATTGCAGATATTGTGATGAGGGAGGATTTTAATATAAACATCTCAAAGCATCAAGCATACAGAGCAAAGAAGATGATAATGGAAAAGCTATGGGATTATTGTGAGGAATTGAGGAAAACTAATCCAGGAAGTACTTACAAAGTGTTGATAGACCTCAAATTCATATGCAACATATTTCTTGAAGTCTGTATATTTGTCTCAGAGCATGTAATGACAGCTTTTTGCACGGTTGATGCATGTCATGGAAAATTGTTAAGTATTGTGGTAATAGATGCAAATGATGGAATTTTTCCATTAGCCTTGGCTACGGTGGATGTGGAGTCCAAATAA

Protein sequence

MDWKAIADIVMREDFNINISKHQAYRAKKMIMEKLWDYCEELRKTNPGSTYKVLIDLKFICNIFLEVCIFVSEHVMTAFCTVDACHGKLLSIVVIDANDGIFPLALATVDVESK

Homology

[Close]

BLAST of Bhi04G001550 vs. TrEMBL
Match: tr|M5Y8S8|M5Y8S8_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa018699mg PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.3e-10
Identity = 46/125 (36.80%), Postives = 71/125 (56.80%), Query Frame = 0


Query: 13  EDFNINISKHQAYRAK---KMIM--------EKLWDYCEELRKTNPGSTYKVLIDLKFIC 72
           E +++N+SKH  YRAK   K+I+         +LWDY EEL+K N GST  +   +K   
Sbjct: 278 EKYHMNVSKHHIYRAKTLSKVIIGGSYVEQYARLWDYVEELKKANKGSTVIIKNKMKGNK 337

Query: 73  NIF--LEVCIFVSEHVMTAFCT----VDACH------GKLLSIVVIDANDGIFPLALATV 115
            +F  + VC+   +   +A C     +D CH      G++L+ V +D N+G++P+A A V
Sbjct: 338 PVFERIYVCLETCKRGFSAGCRPLIGIDGCHLKRPYTGQVLTAVSVDGNNGLYPVAYAVV 397

[Close]

BLAST of Bhi04G001550 vs. TrEMBL
Match: tr|M5XRH2|M5XRH2_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa014679mg PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 7.4e-10
Identity = 45/125 (36.00%), Postives = 70/125 (56.00%), Query Frame = 0


Query: 13  EDFNINISKHQAYRAK---KMIME--------KLWDYCEELRKTNPGSTYKVLIDLKFIC 72
           E +++N+SKH  YR K   K+I++        +LWDY EEL+K N GST  +   +K   
Sbjct: 221 EKYHMNVSKHHIYRTKNLSKVIIKGSYVKQYARLWDYAEELKKANKGSTMIIKNKMKGNV 280

Query: 73  NIF--LEVCIFVSEHVMTAFCT----VDACH------GKLLSIVVIDANDGIFPLALATV 115
           ++F  + VC+   +    A C     +D CH      G++L  V +D N+G++P+A A V
Sbjct: 281 HVFERIYVCLEACKRGFLARCRPLIGIDGCHLKGPYTGQVLIAVGVDGNNGMYPIAYAVV 340

[Close]

BLAST of Bhi04G001550 vs. TrEMBL
Match: tr|M5XA63|M5XA63_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa025064mg PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.3e-09
Identity = 47/136 (34.56%), Postives = 70/136 (51.47%), Query Frame = 0


Query: 2   DWKAIADIVMREDFNINISKHQAYRAKKMIME-----------KLWDYCEELRKTNPGST 61
           D K+  + V+ ED  IN++K Q YRAK++  +           +LWDY E+L+  N GST
Sbjct: 184 DMKSFQENVL-EDHKINVTKIQVYRAKRLARDLNEGTFKEQYARLWDYAEQLKIANKGST 243

Query: 62  YKVLIDLKFICNIF--LEVCIFVSEHVMTAFCT----VDACH------GKLLSIVVIDAN 115
            K+   +     +F  + VC+   +      C     VD CH      G++L+ V +D N
Sbjct: 244 VKIKTQIVKGETVFQRIYVCLAACKKGFLEGCKPVIGVDGCHLKWPYPGQILTAVGVDGN 303

[Close]

BLAST of Bhi04G001550 vs. TrEMBL
Match: tr|M5XNG5|M5XNG5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa020336mg PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.8e-09
Identity = 50/135 (37.04%), Postives = 71/135 (52.59%), Query Frame = 0


Query: 5   AIADI--VMREDFNINISKHQAYRAKKMIME-----------KLWDYCEELRKTNPGSTY 64
           ++AD   + R+ ++I++++ Q Y+AK +  E           KLWDYC EL++ NPGST 
Sbjct: 2   SVADFMSLARKHYSIDVTRDQCYKAKNLAKERIQGSIEEQYAKLWDYC-ELKRKNPGSTV 61

Query: 65  KVLIDLK---------FICNIFLEVCIFVSEHVMTAF--CTVDACH-GKLLSIVVIDAND 115
            V   LK         +IC   L    F     M  F    +   H G+LLS V IDAN+
Sbjct: 62  LVKTSLKGDDLVFEGLYICFAQLRKWFFEGCRTMVGFDGAFIKGQHPGQLLSAVGIDANN 121

[Close]

BLAST of Bhi04G001550 vs. TrEMBL
Match: tr|M5WIM0|M5WIM0_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa021325mg PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.8e-09
Identity = 50/133 (37.59%), Postives = 71/133 (53.38%), Query Frame = 0


Query: 1   MDWKAIADIVMREDFNINISKHQAYRAKKMI-------MEKLWDYCEELRKTNPGSTYKV 60
           +D K++ + V+ ED+ IN+++HQ YRAK MI         +L DY EEL+K N GST  +
Sbjct: 160 LDVKSLQEDVL-EDYCINVTRHQIYRAKVMIEGSYIEQYARLRDYAEELKKANKGSTVVI 219

Query: 61  LIDLKFICNIFLE--VCIFVSEHVMTAFCT----VDACH------GKLLSIVVIDANDGI 115
             +      IFL   VC           C     VD CH      G++L+ V +D N+G 
Sbjct: 220 KTEQVGGQAIFLRMYVCFAGCRQRFLDGCRPVIGVDRCHVKGSYPGQILTAVGVDGNNGS 279

[Close]

BLAST of Bhi04G001550 vs. NCBI nr
Match: XP_022156713.1 (uncharacterized protein LOC111023558 [Momordica charantia])

HSP 1 Score: 93.6 bits (231), Expect = 4.7e-16
Identity = 59/132 (44.70%), Postives = 81/132 (61.36%), Query Frame = 0


Query: 8   DIVMREDFNINISKHQAYRAKKMIME-----------KLWDYCEELRKTNPGSTYKVLID 67
           + ++R+DFNINIS+HQAYRA+K+ M            KL DYCEEL ++NP S+Y + +D
Sbjct: 222 EYLVRKDFNINISRHQAYRARKIAMHKLEGTVEMQYAKLRDYCEELWRSNPDSSYLLSVD 281

Query: 68  LKFI--CNIF--LEVCIFVSEHVMTAFCT----VDACH------GKLLSIVVIDANDGIF 115
            + I    IF  + +C+   ++     C     +D CH      G+LL+ V IDAN+GIF
Sbjct: 282 RRQIHMQPIFKSMYICLTACKNGFLQSCRPIIGLDGCHLKTTTQGQLLTAVGIDANEGIF 341

[Close]

BLAST of Bhi04G001550 vs. NCBI nr
Match: XP_019200289.1 (PREDICTED: uncharacterized protein LOC109193917 [Ipomoea nil])

HSP 1 Score: 75.9 bits (185), Expect = 1.0e-10
Identity = 48/131 (36.64%), Postives = 69/131 (52.67%), Query Frame = 0


Query: 11  MREDFNINISKHQAYRAKKMIMEK-----------LWDYCEELRKTNPGSTYKVLIDLK- 70
           ++  F  N+SK+Q+YRA++   E            LWDYCEELR++NPGST K+ +D   
Sbjct: 105 VKRTFRCNVSKYQSYRARRNAKESLIGMQAEQFNMLWDYCEELRRSNPGSTVKMKLDTTD 164

Query: 71  ---FICNIF-LEVCIFVSEHVMTAFCT----VDACH-------GKLLSIVVIDANDGIFP 115
                C    L VC    +    A C     +D CH       G+LL+ V +DAN+ +FP
Sbjct: 165 REGSRCRFLRLYVCFTACKQGFLAGCRQLIGIDGCHLKGFQKGGQLLAAVGVDANNCMFP 224

[Close]

BLAST of Bhi04G001550 vs. NCBI nr
Match: XP_021818960.1 (uncharacterized protein LOC110760915 [Prunus avium])

HSP 1 Score: 75.9 bits (185), Expect = 1.0e-10
Identity = 47/136 (34.56%), Postives = 72/136 (52.94%), Query Frame = 0


Query: 2   DWKAIADIVMREDFNINISKHQAYRAKKMIME-----------KLWDYCEELRKTNPGST 61
           D K+  + V+ ED+ IN+ K Q YRAK +  +           +LWDY E+L+  N GST
Sbjct: 91  DLKSFQEDVL-EDYKINVKKIQVYRAKGLARDLNEGTFKKQYARLWDYAEQLKNANRGST 150

Query: 62  YKVLIDLKFICNIF--LEVCIFVSEHVMTAFCT----VDACH------GKLLSIVVIDAN 115
            K+   +  +  +F  + VC+   +      C     VD CH      G++L++V +D N
Sbjct: 151 MKIKTHIVKVETVFQRIYVCLAACKKGFLEGCRPVIGVDGCHLKGPYPGEILTVVGVDGN 210

[Close]

BLAST of Bhi04G001550 vs. NCBI nr
Match: XP_016652612.1 (PREDICTED: uncharacterized protein LOC107881976 [Prunus mume])

HSP 1 Score: 75.1 bits (183), Expect = 1.7e-10
Identity = 48/125 (38.40%), Postives = 73/125 (58.40%), Query Frame = 0


Query: 13  EDFNINISKHQAYRAK---KMIME--------KLWDYCEELRKTNPGSTYKVLIDLKFIC 72
           E ++IN+SKHQ Y+AK   K+I+E        +LWD  EEL+KTN GST  +   +K   
Sbjct: 187 EKYHINVSKHQIYKAKNLSKVIIEGSYVEQYARLWDSTEELKKTNKGSTVIIKNKMKGNV 246

Query: 73  NIF--LEVCIFVSEHVMTAFCT----VDACHGK------LLSIVVIDANDGIFPLALATV 115
           ++F  + VC+   +    A C     +D CH K      +L+IV +D N+G++P++ A V
Sbjct: 247 SVFERIYVCLEACKRGFLAGCRPLIGIDGCHLKGPYTWQVLTIVGVDGNNGLYPVSYAVV 306

[Close]

BLAST of Bhi04G001550 vs. NCBI nr
Match: XP_021813731.1 (uncharacterized protein LOC110756594 [Prunus avium])

HSP 1 Score: 75.1 bits (183), Expect = 1.7e-10
Identity = 45/127 (35.43%), Postives = 72/127 (56.69%), Query Frame = 0


Query: 10  VMREDFNINISKHQAYRAKKMIME-----------KLWDYCEELRKTNPGSTYKVLIDLK 69
           ++R+++ I+I+ +Q Y+AK +  E           KLWDYCEEL+  NPGST  +  DL+
Sbjct: 121 IVRKNYGIDITANQFYKAKSIARERIHGSIEEQYAKLWDYCEELKTNNPGSTVLIKTDLR 180

Query: 70  FICNIF--LEVCIFVSEHVMTAFCT----VDACH------GKLLSIVVIDANDGIFPLAL 114
               +F  + +C+   +    A C      + CH      G++LS V IDAN+G++P+A 
Sbjct: 181 GDNPVFKRIYICLGALKKGFIAGCRPVVGFNGCHVKGTHPGQILSAVGIDANNGMYPIAF 240

The following BLAST results are available for this feature:

BLAST of Bhi04G001550 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi04G001550 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi04G001550 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|M5Y8S8\|M5Y8S8_PRUPE	4.3e-10	36.80	Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa018699m...	[more]
tr\|M5XRH2\|M5XRH2_PRUPE	7.4e-10	36.00	Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa014679m...	[more]
tr\|M5XA63\|M5XA63_PRUPE	1.3e-09	34.56	Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa025064m...	[more]
tr\|M5XNG5\|M5XNG5_PRUPE	2.8e-09	37.04	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa020336mg PE=4 SV=1	[more]
tr\|M5WIM0\|M5WIM0_PRUPE	2.8e-09	37.59	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa021325mg PE=4 SV=1	[more]

BLAST of Bhi04G001550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156713.1	4.7e-16	44.70	uncharacterized protein LOC111023558 [Momordica charantia]	[more]
XP_019200289.1	1.0e-10	36.64	PREDICTED: uncharacterized protein LOC109193917 [Ipomoea nil]	[more]
XP_021818960.1	1.0e-10	34.56	uncharacterized protein LOC110760915 [Prunus avium]	[more]
XP_016652612.1	1.7e-10	38.40	PREDICTED: uncharacterized protein LOC107881976 [Prunus mume]	[more]
XP_021813731.1	1.7e-10	35.43	uncharacterized protein LOC110756594 [Prunus avium]	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi04M001550	Bhi04M001550	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi04G001550	Cucumber (Gy14) v1	cgywgoB736
Bhi04G001550	Cucumber (Gy14) v2	cgybwgoB549
Bhi04G001550	Cucurbita maxima (Rimu)	cmawgoB0391
Bhi04G001550	Cucurbita maxima (Rimu)	cmawgoB0869
Bhi04G001550	Cucurbita moschata (Rifu)	cmowgoB0386
Bhi04G001550	Cucurbita moschata (Rifu)	cmowgoB0865
Bhi04G001550	Cucurbita moschata (Rifu)	cmowgoB0871
Bhi04G001550	Cucurbita pepo (Zucchini)	cpewgoB0252
Bhi04G001550	Wild cucumber (PI 183967)	cpiwgoB581
Bhi04G001550	Cucumber (Chinese Long) v3	cucwgoB595
Bhi04G001550	Cucumber (Chinese Long) v2	cuwgoB578
Bhi04G001550	Bottle gourd (USVL1VR-Ls)	lsiwgoB597
Bhi04G001550	Melon (DHL92) v3.6.1	medwgoB347
Bhi04G001550	Melon (DHL92) v3.5.1	mewgoB348
Bhi04G001550	Watermelon (Charleston Gray)	wcgwgoB616
Bhi04G001550	Watermelon (97103) v2	wgowmbB317
Bhi04G001550	Watermelon (97103) v1	wgowmB304
Bhi04G001550	Silver-seed gourd	carwgoB0538
Bhi04G001550	Silver-seed gourd	carwgoB0967