Bhi04G001219 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi04G001219
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Unknown protein
Location	chr4 : 39034235 .. 39034533 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAACTCTGGCAAGCGAAAACAAGGGTGCCAAGGCCTCAAATGAAGATTCCACTTGGAAGGTTAGAGGCATATGTGCCATTGTGAAAGGAGTCATCACCTCAGATGCTCATGACTTTGTCATTCTTACAGAAACTAAGTTATCCCCGGTTAATCGCACCCTTGTCAAATCCCTTTGGAACCCCATCAATATTGATTGGGCCTATGTGAATGCAAGCAACTCCTCTGGTGGTAGAGTAATCATGTGGGATTCTCTTAGTCACTCGGTAGCTGATTTTTTTAAGGGAATTACTCCCG

mRNA sequence

ATGGAAACTAAGTTATCCCCGGTTAATCGCACCCTTGTCAAATCCCTTTGGAACCCCATCAATATTGATTGGGCCTATGTGAATGCAAGCAACTCCTCTGGTGGTAGAGTAATCATGTGGGATTCTCTTAGTCACTCGGTAGCTGATTTTTTTAAGGGAATTACTCCCG

Coding sequence (CDS)

ATGGAAACTAAGTTATCCCCGGTTAATCGCACCCTTGTCAAATCCCTTTGGAACCCCATCAATATTGATTGGGCCTATGTGAATGCAAGCAACTCCTCTGGTGGTAGAGTAATCATGTGGGATTCTCTTAGTCACTCGGTAGCTGATTTTTTTAAGGGAATTACTCCCG

Protein sequence

METKLSPVNRTLVKSLWNPINIDWAYVNASNSSGGRVIMWDSLSHSVADFFKGITP

Homology

[Close]

BLAST of Bhi04G001219 vs. TrEMBL
Match: tr|A0A2N9IUH6|A0A2N9IUH6_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56929 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 7.8e-05
Identity = 22/53 (41.51%), Postives = 35/53 (66.04%), Query Frame = 0


Query: 2   ETKLSPVNRTLVKSLWNPINIDWAYVNASNSSGGRVIMWDSLSHSVADFFKGI 55
           ETKL+  N +L++S+W  + + W  +NA NS+GG ++MWD  +    D+F GI
Sbjct: 636 ETKLAAANLSLIRSIWGNMYVGWEVLNAINSAGGILLMWDKRALEKLDYFIGI 688

[Close]

BLAST of Bhi04G001219 vs. TrEMBL
Match: tr|A0A2N9EJ52|A0A2N9EJ52_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2461 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.0e-04
Identity = 21/52 (40.38%), Postives = 35/52 (67.31%), Query Frame = 0


Query: 2   ETKLSPVNRTLVKSLWNPINIDWAYVNASNSSGGRVIMWDSLSHSVADFFKG 54
           ETKL  ++R +V+SLW+   +DW ++ +  +SGG ++MWD+    V D+ KG
Sbjct: 513 ETKLETISRAVVRSLWSNRFVDWKFLESEGASGGILLMWDNRVTEVQDYVKG 564

[Close]

BLAST of Bhi04G001219 vs. TrEMBL
Match: tr|A0A2I4DSC9|A0A2I4DSC9_9ROSI (uncharacterized protein LOC108983003 OS=Juglans regia OX=51240 GN=LOC108983003 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.0e-04
Identity = 21/40 (52.50%), Postives = 31/40 (77.50%), Query Frame = 0


Query: 2  ETKLSPVNRTLVKSLWNPINIDWAYVNASNSSGGRVIMWD 42
          ETKL  ++R +++SLW+ I +DW Y+ +S +SGG VIMWD
Sbjct: 38 ETKLKMISRRIIRSLWSNIYVDWVYLASSGASGGVVIMWD 77

[Close]

BLAST of Bhi04G001219 vs. TrEMBL
Match: tr|A0A2I4HH32|A0A2I4HH32_9ROSI (uncharacterized protein LOC109017719 OS=Juglans regia OX=51240 GN=LOC109017719 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.3e-04
Identity = 21/40 (52.50%), Postives = 31/40 (77.50%), Query Frame = 0


Query: 2  ETKLSPVNRTLVKSLWNPINIDWAYVNASNSSGGRVIMWD 42
          ETKL  ++R +++SLW+ I +DW Y+ +S +SGG VIMWD
Sbjct: 38 ETKLKLISRRIIRSLWSNIYVDWVYLASSGASGGVVIMWD 77

[Close]

BLAST of Bhi04G001219 vs. TrEMBL
Match: tr|A0A2N9GKD3|A0A2N9GKD3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS27954 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 1.7e-04
Identity = 24/53 (45.28%), Postives = 36/53 (67.92%), Query Frame = 0


Query: 2   ETKLSPVNRTLVKSLWNPINIDWAYVNASNSSGGRVIMWDSLS---HSVADFF 52
           ETKL  ++  LV+SLW   ++DW  + A+N++GG +IMWD+LS   H + D F
Sbjct: 801 ETKLDCIDLRLVRSLWGKQHVDWVALEATNTAGGILIMWDTLSCYWHGLVDGF 853

[Close]

BLAST of Bhi04G001219 vs. NCBI nr
Match: XP_022145142.1 (uncharacterized protein LOC111014657 [Momordica charantia])

HSP 1 Score: 57.0 bits (136), Expect = 2.4e-05
Identity = 24/52 (46.15%), Postives = 35/52 (67.31%), Query Frame = 0


Query: 2  ETKLSPVNRTLVKSLWNPINIDWAYVNASNSSGGRVIMWDSLSHSVADFFKG 54
          ETK S +N   +KSLW+ I+I WA ++AS +SGG +++WD LS S  +   G
Sbjct: 36 ETKSSSINNKFIKSLWSSISIAWASLDASGASGGIILLWDQLSTSAVEVICG 87

[Close]

BLAST of Bhi04G001219 vs. NCBI nr
Match: XP_018810054.1 (PREDICTED: uncharacterized protein LOC108983003, partial [Juglans regia])

HSP 1 Score: 54.3 bits (129), Expect = 1.5e-04
Identity = 21/40 (52.50%), Postives = 31/40 (77.50%), Query Frame = 0


Query: 2  ETKLSPVNRTLVKSLWNPINIDWAYVNASNSSGGRVIMWD 42
          ETKL  ++R +++SLW+ I +DW Y+ +S +SGG VIMWD
Sbjct: 38 ETKLKMISRRIIRSLWSNIYVDWVYLASSGASGGVVIMWD 77

[Close]

BLAST of Bhi04G001219 vs. NCBI nr
Match: XP_018855463.1 (PREDICTED: uncharacterized protein LOC109017719, partial [Juglans regia])

HSP 1 Score: 53.9 bits (128), Expect = 2.0e-04
Identity = 21/40 (52.50%), Postives = 31/40 (77.50%), Query Frame = 0


Query: 2  ETKLSPVNRTLVKSLWNPINIDWAYVNASNSSGGRVIMWD 42
          ETKL  ++R +++SLW+ I +DW Y+ +S +SGG VIMWD
Sbjct: 38 ETKLKLISRRIIRSLWSNIYVDWVYLASSGASGGVVIMWD 77

[Close]

BLAST of Bhi04G001219 vs. NCBI nr
Match: XP_011650214.1 (PREDICTED: uncharacterized protein LOC105434766 [Cucumis sativus])

HSP 1 Score: 53.1 bits (126), Expect = 3.4e-04
Identity = 23/52 (44.23%), Postives = 33/52 (63.46%), Query Frame = 0


Query: 2  ETKLSPVNRTLVKSLWNPINIDWAYVNASNSSGGRVIMWDSLSHSVADFFKG 54
          ETKL  VN  LVKS+W+ I+I + +   S  SGG ++MWD L H + ++  G
Sbjct: 36 ETKLLNVNNKLVKSIWSSISIKYIFKQVSGRSGGILLMWDDLKHQLINYVIG 87

[Close]

BLAST of Bhi04G001219 vs. NCBI nr
Match: XP_018807253.1 (PREDICTED: uncharacterized protein LOC108980708 [Juglans regia])

HSP 1 Score: 52.4 bits (124), Expect = 5.9e-04
Identity = 20/40 (50.00%), Postives = 30/40 (75.00%), Query Frame = 0


Query: 2  ETKLSPVNRTLVKSLWNPINIDWAYVNASNSSGGRVIMWD 42
          ETKL  +NR +V++LW+   +DW Y+ +S +SGG V+MWD
Sbjct: 38 ETKLKVINRKIVRTLWSSNCVDWVYLASSGASGGIVVMWD 77

The following BLAST results are available for this feature:

BLAST of Bhi04G001219 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi04G001219 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi04G001219 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2N9IUH6\|A0A2N9IUH6_FAGSY	7.8e-05	41.51	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56929 PE=4 SV=1	[more]
tr\|A0A2N9EJ52\|A0A2N9EJ52_FAGSY	1.0e-04	40.38	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2461 PE=4 SV=1	[more]
tr\|A0A2I4DSC9\|A0A2I4DSC9_9ROSI	1.0e-04	52.50	uncharacterized protein LOC108983003 OS=Juglans regia OX=51240 GN=LOC108983003 P...	[more]
tr\|A0A2I4HH32\|A0A2I4HH32_9ROSI	1.3e-04	52.50	uncharacterized protein LOC109017719 OS=Juglans regia OX=51240 GN=LOC109017719 P...	[more]
tr\|A0A2N9GKD3\|A0A2N9GKD3_FAGSY	1.7e-04	45.28	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS27954 PE=4 SV=1	[more]

BLAST of Bhi04G001219 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145142.1	2.4e-05	46.15	uncharacterized protein LOC111014657 [Momordica charantia]	[more]
XP_018810054.1	1.5e-04	52.50	PREDICTED: uncharacterized protein LOC108983003, partial [Juglans regia]	[more]
XP_018855463.1	2.0e-04	52.50	PREDICTED: uncharacterized protein LOC109017719, partial [Juglans regia]	[more]
XP_011650214.1	3.4e-04	44.23	PREDICTED: uncharacterized protein LOC105434766 [Cucumis sativus]	[more]
XP_018807253.1	5.9e-04	50.00	PREDICTED: uncharacterized protein LOC108980708 [Juglans regia]	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi04M001219	Bhi04M001219	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi04G001219	Cucumber (Gy14) v2	cgybwgoB559
Bhi04G001219	Cucurbita maxima (Rimu)	cmawgoB0205
Bhi04G001219	Cucurbita maxima (Rimu)	cmawgoB0948
Bhi04G001219	Cucurbita moschata (Rifu)	cmowgoB0201
Bhi04G001219	Cucurbita moschata (Rifu)	cmowgoB0949
Bhi04G001219	Cucurbita pepo (Zucchini)	cpewgoB0146
Bhi04G001219	Cucurbita pepo (Zucchini)	cpewgoB1040
Bhi04G001219	Wild cucumber (PI 183967)	cpiwgoB592
Bhi04G001219	Cucumber (Chinese Long) v3	cucwgoB606
Bhi04G001219	Cucumber (Chinese Long) v2	cuwgoB587
Bhi04G001219	Bottle gourd (USVL1VR-Ls)	lsiwgoB606
Bhi04G001219	Melon (DHL92) v3.6.1	medwgoB341
Bhi04G001219	Melon (DHL92) v3.5.1	mewgoB342
Bhi04G001219	Watermelon (Charleston Gray)	wcgwgoB626
Bhi04G001219	Watermelon (97103) v2	wgowmbB327
Bhi04G001219	Watermelon (97103) v1	wgowmB312
Bhi04G001219	Silver-seed gourd	carwgoB0261