Bhi04G000748 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi04G000748
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Cytochrome b reductase 1
Location	chr4 : 23031327 .. 23031667 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GACTAGACTCTTTTTGTAGTTGGATCTCCAAGTTTTTGGAATGCCCCAAATTCTACTTGAGCGTCCAAATCTGGGTCAATCCCAGCAAAGACATCTCTGAACACGATTCTAGCACCATGCCAAATGTGTCCGAAGAAGAAGAGCAAAGCAAACAAAGCATGCCCAAAAGTAAACCAACCCCTTGGACTGCTACGAAAAACCCCATTGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGGGTACAGGTACCCTTTTGTTGAAGGTCGTTCGAGCTTTTCCTGGGAGTATGGCATGGGTTACTTCAGCGCCATAGCGCCTGGTACTCGAACC

mRNA sequence

GACTAGACTCTTTTTGTAGTTGGATCTCCAAGTTTTTGGAATGCCCCAAATTCTACTTGAGCGTCCAAATCTGGGTCAATCCCAGCAAAGACATCTCTGAACACGATTCTAGCACCATGCCAAATGTGTCCGAAGAAGAAGAGCAAAGCAAACAAAGCATGCCCAAAAGTAAACCAACCCCTTGGACTGCTACGAAAAACCCCATTGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGGGTACAGGTACCCTTTTGTTGAAGGTCGTTCGAGCTTTTCCTGGGAGTATGGCATGGGTTACTTCAGCGCCATAGCGCCTGGTACTCGAACC

Coding sequence (CDS)

CTAGACTCTTTTTGTAGTTGGATCTCCAAGTTTTTGGAATGCCCCAAATTCTACTTGAGCGTCCAAATCTGGGTCAATCCCAGCAAAGACATCTCTGAACACGATTCTAGCACCATGCCAAATGTGTCCGAAGAAGAAGAGCAAAGCAAACAAAGCATGCCCAAAAGTAAACCAACCCCTTGGACTGCTACGAAAAACCCCATTGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGGGTACAGGTACCCTTTTGTTGAAGGTCGTTCGAGCTTTTCCTGGGAGTATGGCATGGGTTACTTCAGCGCCATAGCGCCTGGTACTCGAACC

Protein sequence

LDSFCSWISKFLECPKFYLSVQIWVNPSKDISEHDSSTMPNVSEEEEQSKQSMPKSKPTPWTATKNPIAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAIAPGTRT

Homology

[Close]

BLAST of Bhi04G000748 vs. TrEMBL
Match: tr|A0A2N9I3B0|A0A2N9I3B0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21723 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.5e-18
Identity = 44/46 (95.65%), Postives = 46/46 (100.00%), Query Frame = 0


Query: 68  IAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAIAPGTRT 114
           +APLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSA+APGTRT
Sbjct: 280 LAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAVAPGTRT 325

[Close]

BLAST of Bhi04G000748 vs. TrEMBL
Match: tr|A0A2N9I7K2|A0A2N9I7K2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26797 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.5e-18
Identity = 44/46 (95.65%), Postives = 46/46 (100.00%), Query Frame = 0


Query: 68  IAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAIAPGTRT 114
           +APLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSA+APGTRT
Sbjct: 280 LAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAVAPGTRT 325

[Close]

BLAST of Bhi04G000748 vs. TrEMBL
Match: tr|A0A2N9HR91|A0A2N9HR91_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40356 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.5e-18
Identity = 44/46 (95.65%), Postives = 46/46 (100.00%), Query Frame = 0


Query: 68  IAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAIAPGTRT 114
           +APLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSA+APGTRT
Sbjct: 280 LAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAVAPGTRT 325

[Close]

BLAST of Bhi04G000748 vs. TrEMBL
Match: tr|A0A2N9I1D1|A0A2N9I1D1_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45726 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.5e-18
Identity = 44/46 (95.65%), Postives = 46/46 (100.00%), Query Frame = 0


Query: 68  IAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAIAPGTRT 114
           +APLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSA+APGTRT
Sbjct: 280 LAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAVAPGTRT 325

[Close]

BLAST of Bhi04G000748 vs. TrEMBL
Match: tr|A0A2N9H1D9|A0A2N9H1D9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33333 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.5e-18
Identity = 44/46 (95.65%), Postives = 46/46 (100.00%), Query Frame = 0


Query: 68  IAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAIAPGTRT 114
           +APLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSA+APGTRT
Sbjct: 280 LAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAVAPGTRT 325

[Close]

BLAST of Bhi04G000748 vs. NCBI nr
Match: KZN08865.1 (hypothetical protein DCAR_001521 [Daucus carota subsp. sativus])

HSP 1 Score: 101.3 bits (251), Expect = 2.2e-18
Identity = 44/46 (95.65%), Postives = 46/46 (100.00%), Query Frame = 0


Query: 68  IAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAIAPGTRT 114
           +APLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSA+APGTRT
Sbjct: 263 LAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAVAPGTRT 308

[Close]

BLAST of Bhi04G000748 vs. NCBI nr
Match: OIV89924.1 (hypothetical protein TanjilG_08301 [Lupinus angustifolius])

HSP 1 Score: 101.3 bits (251), Expect = 2.2e-18
Identity = 44/46 (95.65%), Postives = 46/46 (100.00%), Query Frame = 0


Query: 68  IAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAIAPGTRT 114
           +APLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSA+APGTRT
Sbjct: 194 LAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAVAPGTRT 239

[Close]

BLAST of Bhi04G000748 vs. NCBI nr
Match: PLY95710.1 (hypothetical protein LSAT_2X50801 [Lactuca sativa])

HSP 1 Score: 99.8 bits (247), Expect = 6.5e-18
Identity = 43/46 (93.48%), Postives = 46/46 (100.00%), Query Frame = 0


Query: 68  IAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAIAPGTRT 114
           +APLGILYLPTCVGFGYRYPFVEGRSSFSWEYG+GYFSA+APGTRT
Sbjct: 175 LAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGIGYFSAVAPGTRT 220

[Close]

BLAST of Bhi04G000748 vs. NCBI nr
Match: PWA76046.1 (hypothetical protein CTI12_AA236480 (chloroplast) [Artemisia annua])

HSP 1 Score: 99.8 bits (247), Expect = 6.5e-18
Identity = 43/46 (93.48%), Postives = 46/46 (100.00%), Query Frame = 0


Query: 68  IAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAIAPGTRT 114
           +APLGILYLPTCVGFGYRYPFVEGRSSFSWEYG+GYFSA+APGTRT
Sbjct: 175 LAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGIGYFSAVAPGTRT 220

[Close]

BLAST of Bhi04G000748 vs. NCBI nr
Match: PWA74212.1 (hypothetical protein CTI12_AA254690 [Artemisia annua])

HSP 1 Score: 99.4 bits (246), Expect = 8.5e-18
Identity = 44/50 (88.00%), Postives = 48/50 (96.00%), Query Frame = 0


Query: 64  TKNPIAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAIAPGTRT 114
           T++ +APLGILYLPTCVGFGY YPFVEGRSSFSWEYG+GYFSAIAPGTRT
Sbjct: 86  TESCLAPLGILYLPTCVGFGYMYPFVEGRSSFSWEYGIGYFSAIAPGTRT 135

The following BLAST results are available for this feature:

BLAST of Bhi04G000748 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi04G000748 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi04G000748 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2N9I3B0\|A0A2N9I3B0_FAGSY	1.5e-18	95.65	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21723 PE=4 SV=1	[more]
tr\|A0A2N9I7K2\|A0A2N9I7K2_FAGSY	1.5e-18	95.65	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26797 PE=4 SV=1	[more]
tr\|A0A2N9HR91\|A0A2N9HR91_FAGSY	1.5e-18	95.65	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40356 PE=4 SV=1	[more]
tr\|A0A2N9I1D1\|A0A2N9I1D1_FAGSY	1.5e-18	95.65	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45726 PE=4 SV=1	[more]
tr\|A0A2N9H1D9\|A0A2N9H1D9_FAGSY	1.5e-18	95.65	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33333 PE=4 SV=1	[more]

BLAST of Bhi04G000748 vs. NCBI nr


Match Name	E-value	Identity	Description
KZN08865.1	2.2e-18	95.65	hypothetical protein DCAR_001521 [Daucus carota subsp. sativus]	[more]
OIV89924.1	2.2e-18	95.65	hypothetical protein TanjilG_08301 [Lupinus angustifolius]	[more]
PLY95710.1	6.5e-18	93.48	hypothetical protein LSAT_2X50801 [Lactuca sativa]	[more]
PWA76046.1	6.5e-18	93.48	hypothetical protein CTI12_AA236480 (chloroplast) [Artemisia annua]	[more]
PWA74212.1	8.5e-18	88.00	hypothetical protein CTI12_AA254690 [Artemisia annua]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi04M000748	Bhi04M000748	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..63

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi04G000748	Cucumber (Gy14) v1	cgywgoB317
Bhi04G000748	Cucumber (Gy14) v2	cgybwgoB160
Bhi04G000748	Cucurbita maxima (Rimu)	cmawgoB0021
Bhi04G000748	Cucurbita maxima (Rimu)	cmawgoB0198
Bhi04G000748	Cucurbita maxima (Rimu)	cmawgoB0944
Bhi04G000748	Cucurbita moschata (Rifu)	cmowgoB0014
Bhi04G000748	Cucurbita moschata (Rifu)	cmowgoB0196
Bhi04G000748	Cucurbita moschata (Rifu)	cmowgoB0946
Bhi04G000748	Cucurbita pepo (Zucchini)	cpewgoB0143
Bhi04G000748	Cucurbita pepo (Zucchini)	cpewgoB0985
Bhi04G000748	Cucurbita pepo (Zucchini)	cpewgoB1032
Bhi04G000748	Wild cucumber (PI 183967)	cpiwgoB162
Bhi04G000748	Cucumber (Chinese Long) v3	cucwgoB172
Bhi04G000748	Cucumber (Chinese Long) v2	cuwgoB165
Bhi04G000748	Bottle gourd (USVL1VR-Ls)	lsiwgoB369
Bhi04G000748	Bottle gourd (USVL1VR-Ls)	lsiwgoB605
Bhi04G000748	Melon (DHL92) v3.6.1	medwgoB323
Bhi04G000748	Melon (DHL92) v3.5.1	mewgoB325
Bhi04G000748	Watermelon (Charleston Gray)	wcgwgoB627
Bhi04G000748	Watermelon (97103) v2	wgowmbB296
Bhi04G000748	Watermelon (97103) v2	wgowmbB328
Bhi04G000748	Watermelon (97103) v1	wgowmB311
Bhi04G000748	Silver-seed gourd	carwgoB0068
Bhi04G000748	Silver-seed gourd	carwgoB0751