Bhi04G000739 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi04G000739
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	ATP synthase subunit c, chloroplastic
Location	chr4 : 22777047 .. 22777292 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCCACTGATTTCTGCCGCTTTCGTTATTGCTGCTGGGTTGGCCGTCGGGCTTGCTTTTATTGGACTTGGGGTAGGTCAAGGTACTGCTGCAGGCCAAGTTGTAGAAGGGATCGCGAGACAACCCGAGGAGGAGGGAAAAATCCGAGGTACTTTATTGCTTAGTCTGGCTTTTATGGAAGCTTTAACTATTTATGGACTGGTTGTAGCATTAGCACTTTTATTTGCGAATCCTTTTGTTTAA

mRNA sequence

ATGAATCCACTGATTTCTGCCGCTTTCGTTATTGCTGCTGGGTTGGCCGTCGGGCTTGCTTTTATTGGACTTGGGGTAGGTCAAGGTACTGCTGCAGGCCAAGTTGTAGAAGGGATCGCGAGACAACCCGAGGAGGAGGGAAAAATCCGAGGTACTTTATTGCTTAGTCTGGCTTTTATGGAAGCTTTAACTATTTATGGACTGGTTGTAGCATTAGCACTTTTATTTGCGAATCCTTTTGTTTAA

Coding sequence (CDS)

ATGAATCCACTGATTTCTGCCGCTTTCGTTATTGCTGCTGGGTTGGCCGTCGGGCTTGCTTTTATTGGACTTGGGGTAGGTCAAGGTACTGCTGCAGGCCAAGTTGTAGAAGGGATCGCGAGACAACCCGAGGAGGAGGGAAAAATCCGAGGTACTTTATTGCTTAGTCTGGCTTTTATGGAAGCTTTAACTATTTATGGACTGGTTGTAGCATTAGCACTTTTATTTGCGAATCCTTTTGTTTAA

Protein sequence

MNPLISAAFVIAAGLAVGLAFIGLGVGQGTAAGQVVEGIARQPEEEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV

Homology

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BLAST of Bhi04G000739 vs. Swiss-Prot
Match: sp|Q1ACN0|ATPH_CHAVU (ATP synthase subunit c, chloroplastic OS=Chara vulgaris OX=55564 GN=atpH PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.0e-29
Identity = 75/81 (92.59%), Postives = 76/81 (93.83%), Query Frame = 0


Query: 1  MNPLISAAFVIAAGLAVGLAFIGLGVGQGTAAGQVVEGIARQPEEEGKIRGTLLLSLAFM 60
          MNPLISAA VIAAGLAVGL+ IG GVGQGTAAGQ VEGIARQPE EGKIRGTLLLSLAFM
Sbjct: 1  MNPLISAASVIAAGLAVGLSSIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFM 60

Query: 61 EALTIYGLVVALALLFANPFV 82
          EALTIYGLVVALALLFANPFV
Sbjct: 61 EALTIYGLVVALALLFANPFV 81

[Close]

BLAST of Bhi04G000739 vs. Swiss-Prot
Match: sp|B1VKH8|ATPH_CRYJA (ATP synthase subunit c, chloroplastic OS=Cryptomeria japonica OX=3369 GN=atpH PE=3 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.4e-29
Identity = 74/81 (91.36%), Postives = 76/81 (93.83%), Query Frame = 0


Query: 1  MNPLISAAFVIAAGLAVGLAFIGLGVGQGTAAGQVVEGIARQPEEEGKIRGTLLLSLAFM 60
          MNPLISAA VIAAGL+VGLA IG G+GQGTAAGQ VEGIARQPE EGKIRGTLLLSLAFM
Sbjct: 1  MNPLISAASVIAAGLSVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFM 60

Query: 61 EALTIYGLVVALALLFANPFV 82
          EALTIYGLVVALALLFANPFV
Sbjct: 61 EALTIYGLVVALALLFANPFV 81

[Close]

BLAST of Bhi04G000739 vs. Swiss-Prot
Match: sp|Q7GUD2|ATPH_PINKO (ATP synthase subunit c, chloroplastic OS=Pinus koraiensis OX=88728 GN=atpH PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 4.0e-29
Identity = 74/81 (91.36%), Postives = 76/81 (93.83%), Query Frame = 0


Query: 1  MNPLISAAFVIAAGLAVGLAFIGLGVGQGTAAGQVVEGIARQPEEEGKIRGTLLLSLAFM 60
          M+PLISAA VIAAGL+VGLA IG GVGQGTAAGQ VEGIARQPE EGKIRGTLLLSLAFM
Sbjct: 1  MDPLISAASVIAAGLSVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFM 60

Query: 61 EALTIYGLVVALALLFANPFV 82
          EALTIYGLVVALALLFANPFV
Sbjct: 61 EALTIYGLVVALALLFANPFV 81

[Close]

BLAST of Bhi04G000739 vs. Swiss-Prot
Match: sp|P41603|ATPH_PINTH (ATP synthase subunit c, chloroplastic OS=Pinus thunbergii OX=3350 GN=atpH PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 4.0e-29
Identity = 74/81 (91.36%), Postives = 76/81 (93.83%), Query Frame = 0


Query: 1  MNPLISAAFVIAAGLAVGLAFIGLGVGQGTAAGQVVEGIARQPEEEGKIRGTLLLSLAFM 60
          M+PLISAA VIAAGL+VGLA IG GVGQGTAAGQ VEGIARQPE EGKIRGTLLLSLAFM
Sbjct: 1  MDPLISAASVIAAGLSVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFM 60

Query: 61 EALTIYGLVVALALLFANPFV 82
          EALTIYGLVVALALLFANPFV
Sbjct: 61 EALTIYGLVVALALLFANPFV 81

[Close]

BLAST of Bhi04G000739 vs. Swiss-Prot
Match: sp|A7M8Z1|ATPH_CUSGR (ATP synthase subunit C, plastid OS=Cuscuta gronovii OX=35886 GN=atpE PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.2e-28
Identity = 71/81 (87.65%), Postives = 75/81 (92.59%), Query Frame = 0


Query: 1  MNPLISAAFVIAAGLAVGLAFIGLGVGQGTAAGQVVEGIARQPEEEGKIRGTLLLSLAFM 60
          MNP+ISAA VIAAG AVGLA IG G+GQGTAAG+ VEGIARQPE EGKIRGTLLLSLAFM
Sbjct: 1  MNPIISAASVIAAGFAVGLASIGPGIGQGTAAGRAVEGIARQPEAEGKIRGTLLLSLAFM 60

Query: 61 EALTIYGLVVALALLFANPFV 82
          EALTIYGLVVALALLFANPF+
Sbjct: 61 EALTIYGLVVALALLFANPFI 81

[Close]

BLAST of Bhi04G000739 vs. TAIR10
Match: ATCG00140.1 (ATP synthase subunit C family protein)

HSP 1 Score: 97.8 bits (242), Expect = 3.2e-21
Identity = 60/81 (74.07%), Postives = 61/81 (75.31%), Query Frame = 0


Query: 1  MNPLISAAFVIAAGLAVGLAFIGLGVGQGTAAGQVVEGIARQPEEEGKIRGTLLLSLAFM 60
          MNPL+SAA VIAAGLA                 Q VEGIARQPE EGKIRGTLLLSLAFM
Sbjct: 1  MNPLVSAASVIAAGLAXXXXXXXXXXXXXXXXXQAVEGIARQPEAEGKIRGTLLLSLAFM 60

Query: 61 EALTIYGLVVALALLFANPFV 82
          EALTIYGLVVALALLFANPFV
Sbjct: 61 EALTIYGLVVALALLFANPFV 81

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BLAST of Bhi04G000739 vs. TrEMBL
Match: tr|A0A2G3CRR6|A0A2G3CRR6_CAPCH (ATP synthase subunit c, chloroplastic OS=Capsicum chinense OX=80379 GN=BC332_06484 PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 9.5e-28
Identity = 75/81 (92.59%), Postives = 75/81 (92.59%), Query Frame = 0


Query: 1  MNPLISAAFVIAAGLAVGLAFIGLGVGQGTAAGQVVEGIARQPEEEGKIRGTLLLSLAFM 60
          MNPLISAAFVIAAGLAVGLA IG GVGQGTA GQ VEGIARQPE EGKIRGTLLLSL FM
Sbjct: 1  MNPLISAAFVIAAGLAVGLASIGPGVGQGTATGQAVEGIARQPEAEGKIRGTLLLSLTFM 60

Query: 61 EALTIYGLVVALALLFANPFV 82
          EALTIYGLVVALALLFANPFV
Sbjct: 61 EALTIYGLVVALALLFANPFV 81

[Close]

BLAST of Bhi04G000739 vs. TrEMBL
Match: tr|A0A2D1GRU3|A0A2D1GRU3_9MAGN (ATP synthase subunit c, chloroplastic OS=Taxillus chinensis OX=227909 GN=atpH PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.1e-27
Identity = 75/81 (92.59%), Postives = 76/81 (93.83%), Query Frame = 0


Query: 1  MNPLISAAFVIAAGLAVGLAFIGLGVGQGTAAGQVVEGIARQPEEEGKIRGTLLLSLAFM 60
          MNPLISAA VIAAGLAVGL+ IG GVGQGTAAGQ VEGIARQPE EGKIRGTLLLSLAFM
Sbjct: 1  MNPLISAASVIAAGLAVGLSSIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFM 60

Query: 61 EALTIYGLVVALALLFANPFV 82
          EALTIYGLVVALALLFANPFV
Sbjct: 61 EALTIYGLVVALALLFANPFV 81

[Close]

BLAST of Bhi04G000739 vs. TrEMBL
Match: tr|A0A2D1GS51|A0A2D1GS51_9MAGN (ATP synthase subunit c, chloroplastic OS=Taxillus sutchuenensis OX=227910 GN=atpH PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.1e-27
Identity = 75/81 (92.59%), Postives = 76/81 (93.83%), Query Frame = 0


Query: 1  MNPLISAAFVIAAGLAVGLAFIGLGVGQGTAAGQVVEGIARQPEEEGKIRGTLLLSLAFM 60
          MNPLISAA VIAAGLAVGL+ IG GVGQGTAAGQ VEGIARQPE EGKIRGTLLLSLAFM
Sbjct: 1  MNPLISAASVIAAGLAVGLSSIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFM 60

Query: 61 EALTIYGLVVALALLFANPFV 82
          EALTIYGLVVALALLFANPFV
Sbjct: 61 EALTIYGLVVALALLFANPFV 81

[Close]

BLAST of Bhi04G000739 vs. TrEMBL
Match: tr|D3WCY5|D3WCY5_XIMAM (ATP synthase subunit c, chloroplastic OS=Ximenia americana OX=50174 GN=atpH PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.1e-27
Identity = 75/81 (92.59%), Postives = 76/81 (93.83%), Query Frame = 0


Query: 1  MNPLISAAFVIAAGLAVGLAFIGLGVGQGTAAGQVVEGIARQPEEEGKIRGTLLLSLAFM 60
          MNPLISAA VIAAGLAVGL+ IG GVGQGTAAGQ VEGIARQPE EGKIRGTLLLSLAFM
Sbjct: 1  MNPLISAASVIAAGLAVGLSSIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFM 60

Query: 61 EALTIYGLVVALALLFANPFV 82
          EALTIYGLVVALALLFANPFV
Sbjct: 61 EALTIYGLVVALALLFANPFV 81

[Close]

BLAST of Bhi04G000739 vs. TrEMBL
Match: tr|G3XHF4|G3XHF4_SCIVE (ATP synthase subunit c, chloroplastic OS=Sciadopitys verticillata OX=28979 GN=atpH PE=3 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.8e-27
Identity = 74/81 (91.36%), Postives = 76/81 (93.83%), Query Frame = 0


Query: 1  MNPLISAAFVIAAGLAVGLAFIGLGVGQGTAAGQVVEGIARQPEEEGKIRGTLLLSLAFM 60
          MNPLISAA VIAAGL+VGLA IG G+GQGTAAGQ VEGIARQPE EGKIRGTLLLSLAFM
Sbjct: 1  MNPLISAASVIAAGLSVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFM 60

Query: 61 EALTIYGLVVALALLFANPFV 82
          EALTIYGLVVALALLFANPFV
Sbjct: 61 EALTIYGLVVALALLFANPFV 81

[Close]

BLAST of Bhi04G000739 vs. NCBI nr
Match: PHU21377.1 (ATP synthase subunit c, chloroplastic [Capsicum chinense])

HSP 1 Score: 131.3 bits (329), Expect = 1.4e-27
Identity = 75/81 (92.59%), Postives = 75/81 (92.59%), Query Frame = 0


Query: 1  MNPLISAAFVIAAGLAVGLAFIGLGVGQGTAAGQVVEGIARQPEEEGKIRGTLLLSLAFM 60
          MNPLISAAFVIAAGLAVGLA IG GVGQGTA GQ VEGIARQPE EGKIRGTLLLSL FM
Sbjct: 1  MNPLISAAFVIAAGLAVGLASIGPGVGQGTATGQAVEGIARQPEAEGKIRGTLLLSLTFM 60

Query: 61 EALTIYGLVVALALLFANPFV 82
          EALTIYGLVVALALLFANPFV
Sbjct: 61 EALTIYGLVVALALLFANPFV 81

[Close]

BLAST of Bhi04G000739 vs. NCBI nr
Match: YP_635717.1 (ATP synthase CF0 C subunit [Chara vulgaris] >YP_009442318.1 ATP synthase CF0 C subunit (chloroplast) [Taxillus chinensis] >YP_009442384.1 ATP synthase CF0 C subunit (chloroplast) [Taxillus sutchuenensis] >Q1ACN0.1 RecName: Full=ATP synthase subunit c, chloroplastic; AltName: Full=ATP synthase F(0) sector subunit c; AltName: Full=ATPase subunit III; AltName: Full=F-type ATPase subunit c; Short=F-ATPase subunit c; AltName: Full=Lipid-binding protein >ABA61934.1 CF0 subunit III of ATP synthase (chloroplast) [Chara vulgaris] >ADD31576.1 ATP synthase CF0 subunit III protein (chloroplast) [Ximenia americana] >ATN95691.1 ATP synthase CF0 C subunit (chloroplast) [Taxillus chinensis] >ATN95797.1 ATP synthase CF0 C subunit (chloroplast) [Taxillus sutchuenensis] >AXB38585.1 ATP synthase CF0 C subunit (chloroplast) [Helixanthera parasitica] >AXB38654.1 ATP synthase CF0 C subunit (chloroplast) [Macrosolen cochinchinensis])

HSP 1 Score: 130.2 bits (326), Expect = 3.2e-27
Identity = 75/81 (92.59%), Postives = 76/81 (93.83%), Query Frame = 0


Query: 1  MNPLISAAFVIAAGLAVGLAFIGLGVGQGTAAGQVVEGIARQPEEEGKIRGTLLLSLAFM 60
          MNPLISAA VIAAGLAVGL+ IG GVGQGTAAGQ VEGIARQPE EGKIRGTLLLSLAFM
Sbjct: 1  MNPLISAASVIAAGLAVGLSSIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFM 60

Query: 61 EALTIYGLVVALALLFANPFV 82
          EALTIYGLVVALALLFANPFV
Sbjct: 61 EALTIYGLVVALALLFANPFV 81

[Close]

BLAST of Bhi04G000739 vs. NCBI nr
Match: YP_008994555.1 (ATP synthase CF0 subunit III (chloroplast) (chloroplast) [Pelargonium alternans] >AGV02984.1 ATP synthase CF0 subunit III (chloroplast) [Pelargonium alternans])

HSP 1 Score: 129.8 bits (325), Expect = 4.2e-27
Identity = 74/81 (91.36%), Postives = 76/81 (93.83%), Query Frame = 0


Query: 1  MNPLISAAFVIAAGLAVGLAFIGLGVGQGTAAGQVVEGIARQPEEEGKIRGTLLLSLAFM 60
          MNPLISAA VI+AGLAVGLA IG G+GQGTAAGQ VEGIARQPE EGKIRGTLLLSLAFM
Sbjct: 1  MNPLISAASVISAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFM 60

Query: 61 EALTIYGLVVALALLFANPFV 82
          EALTIYGLVVALALLFANPFV
Sbjct: 61 EALTIYGLVVALALLFANPFV 81

[Close]

BLAST of Bhi04G000739 vs. NCBI nr
Match: YP_009057760.1 (CF0 subunit III of ATP synthase (chloroplast) [Picocystis salinarum] >AID67582.1 CF0 subunit III of ATP synthase (chloroplast) [Picocystis salinarum])

HSP 1 Score: 129.8 bits (325), Expect = 4.2e-27
Identity = 74/81 (91.36%), Postives = 76/81 (93.83%), Query Frame = 0


Query: 1  MNPLISAAFVIAAGLAVGLAFIGLGVGQGTAAGQVVEGIARQPEEEGKIRGTLLLSLAFM 60
          MNPL+SAA VIAAGLAVGLA IG G+GQGTAAGQ VEGIARQPE EGKIRGTLLLSLAFM
Sbjct: 1  MNPLVSAASVIAAGLAVGLASIGPGLGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFM 60

Query: 61 EALTIYGLVVALALLFANPFV 82
          EALTIYGLVVALALLFANPFV
Sbjct: 61 EALTIYGLVVALALLFANPFV 81

[Close]

BLAST of Bhi04G000739 vs. NCBI nr
Match: YP_001806691.1 (ATP synthase CF0 C subunit [Cryptomeria japonica] >YP_004891346.1 ATP synthase CF0 C chain (chloroplast) [Cephalotaxus wilsoniana] >YP_004891488.1 ATP synthase CF0 C chain (chloroplast) [Taiwania cryptomerioides] >YP_007474808.1 ATP synthase CF0 C chain (chloroplast) [Taxus mairei] >YP_007475585.1 AtpH (chloroplast) [Podocarpus totara] >YP_007890230.1 ATP synthase CF0 subunit III (chloroplast) [Cephalotaxus oliveri] >YP_008082115.1 ATP synthase CF0 subunit III (chloroplast) [Cunninghamia lanceolata] >YP_008082405.1 ATP synthase CF0 C chain (chloroplast) [Taiwania flousiana] >YP_008965017.1 ATP synthase CF0 C chain (chloroplast) [Agathis dammara] >YP_008965098.1 ATP synthase CF0 C chain (chloroplast) [Nageia nagi] >YP_009020324.1 ATP synthase CF0 subunit III (chloroplast) [Podocarpus lambertii] >YP_009026655.1 ATP synthase CF0 subunit III (chloroplast) [Juniperus monosperma] >YP_009026727.1 ATP synthase CF0 subunit III (chloroplast) [Juniperus scopulorum] >YP_009026819.1 ATP synthase CF0 subunit III (chloroplast) [Juniperus virginiana] >YP_009026563.1 ATP synthase CF0 subunit III (chloroplast) [Juniperus bermudiana] >YP_009057728.1 ATP synthase CF0 subunit III (chloroplast) [Retrophyllum piresii] >YP_009059727.1 ATP synthase CF0 C chain (chloroplast) [Amentotaxus formosana] >YP_009117392.1 ATP synthase CF0 subunit III [Callitropsis nootkatensis] >YP_009117474.1 ATP synthase CF0 subunit III [Cupressus sempervirens] >YP_009117556.1 ATP synthase CF0 subunit III [Hesperocyparis glabra] >YP_009117638.1 ATP synthase CF0 subunit III [Callitropsis vietnamensis] >YP_009121287.1 ATPase III subunit (plastid) [Araucaria heterophylla] >YP_009144046.1 ATP synthase CF0 C chain (chloroplast) [Wollemia nobilis] >YP_009154343.1 ATP synthase CF0 subunit III (chloroplast) [Metasequoia glyptostroboides] >YP_009158989.1 ATP synthase CF0 subunit III (chloroplast) [Amentotaxus argotaenia] >YP_009175457.1 ATP synthase CF0 subunit III (chloroplast) [Cupressus gigantea] >YP_009176177.1 ATP synthase CF0 subunit III (chloroplast) [Juniperus cedrus] >YP_009233150.1 ATP synthase CF0 subunit III (chloroplast) [Torreya fargesii] >YP_009240148.1 ATP synthase CF0 subunit III (chloroplast) [Sciadopitys verticillata] >YP_009259072.1 ATP synthase CF0 subunit III (chloroplast) [Sequoia sempervirens] >YP_009305846.1 ATP synthase CF0 subunit III (chloroplast) [Glyptostrobus pensilis] >YP_009370436.1 ATP synthase CF0 subunit III (chloroplast) [Cupressus chengiana] >YP_009371168.1 AtpH (chloroplast) [Torreya grandis] >YP_009379799.1 ATP synthase CF0 C chain (chloroplast) [Callitris rhomboidea] >YP_009379820.1 ATP synthase CF0 C chain (chloroplast) [Taxodium distichum] >YP_009379956.1 ATP synthase CF0 C chain (chloroplast) [Dacrycarpus imbricatus] >YP_009379973.1 ATP synthase CF0 C chain (chloroplast) [Chamaecyparis formosensis] >YP_009388014.1 ATP synthase CF0 subunit III (chloroplast) [Taxus baccata] >YP_009388158.1 ATP synthase CF0 subunit III (chloroplast) [Juniperus communis] >YP_009459402.1 ATP synthase CF0 subunit III (chloroplast) [Cupressus jiangeensis] >YP_009462935.1 ATP synthase CF0 subunit III (chloroplast) [Chamaecyparis hodginsii] >YP_009471739.1 ATP synthase CF0 subunit III (chloroplast) [Cephalotaxus sinensis] >YP_009475533.1 ATP synthase CF0 subunit III (chloroplast) [Juniperus microsperma] >YP_009500219.1 ATP synthase CF0 C subunit (chloroplast) [Taxus fuana] >YP_009511997.1 ATP synthase CF0 subunit III (plastid) [Araucaria angustifolia] >B1VKH8.1 RecName: Full=ATP synthase subunit c, chloroplastic; AltName: Full=ATP synthase F(0) sector subunit c; AltName: Full=ATPase subunit III; AltName: Full=F-type ATPase subunit c; Short=F-ATPase subunit c; AltName: Full=Lipid-binding protein >BAG16689.1 ATP synthase CF0 subunit III (chloroplast) [Cryptomeria japonica] >BAH73314.1 ATP synthase CF0 subunit III (chloroplast) [Cryptomeria japonica] >BAH73396.1 ATP synthase CF0 subunit III (chloroplast) [Cryptomeria japonica] >BAK86754.1 ATP synthase CF0 C chain (chloroplast) [Agathis dammara] >BAK86822.1 ATP synthase CF0 C chain (chloroplast) [Taiwania cryptomerioides] >BAK86646.1 ATP synthase CF0 C chain (chloroplast) [Nageia nagi] >BAK86701.1 ATP synthase CF0 C chain (chloroplast) [Sciadopitys verticillata] >BAL03727.1 ATP synthase CF0 C chain (chloroplast) [Cephalotaxus wilsoniana] >AER45641.1 atpH (chloroplast) [Halocarpus kirkii] >AER45642.1 atpH (chloroplast) [Agathis australis] >AER45643.1 atpH (chloroplast) [Podocarpus totara] >AEX99357.1 ATP synthase CF0 C chain (chloroplast) [Taxus mairei] >AEX99433.1 ATP synthase CF0 C chain (chloroplast) [Taxus mairei] >AEX99595.1 ATP synthase CF0 C chain (chloroplast) [Taxus mairei] >AFZ65595.1 ATP synthase CF0 subunit III (chloroplast) [Cephalotaxus oliveri] >AGE65881.1 AtpH (chloroplast) [Podocarpus totara] >BAN16939.1 ATP synthase CF0 C chain (chloroplast) [Calocedrus formosana] >AGL10961.1 ATP synthase CF0 subunit III (chloroplast) [Cunninghamia lanceolata] >AGL11251.1 ATP synthase CF0 C chain (chloroplast) [Taiwania flousiana] >BAO19701.1 ATP synthase CF0 C chain (chloroplast) (chloroplast) [Agathis dammara] >BAO19782.1 ATP synthase CF0 C chain (chloroplast) (chloroplast) [Nageia nagi] >AHH30063.1 ATP synthase CF0 subunit III (chloroplast) [Juniperus bermudiana] >AHH30150.1 ATP synthase CF0 subunit III (chloroplast) [Juniperus monosperma] >AHH30225.1 ATP synthase CF0 subunit III (chloroplast) [Juniperus scopulorum] >AHH30318.1 ATP synthase CF0 subunit III (chloroplast) [Juniperus virginiana] >AHL24763.1 ATP synthase CF0 subunit III (chloroplast) [Podocarpus lambertii] >AHL69525.1 AtpH (chloroplast) [Taxus mairei] >AIC07468.1 ATP synthase CF0 subunit III (chloroplast) [Retrophyllum piresii] >BAP47717.1 ATP synthase CF0 C chain (chloroplast) [Amentotaxus formosana] >BAP47809.1 ATP synthase CF0 C chain (chloroplast) [Taxus mairei] >AIW58380.1 ATPase III subunit (plastid) [Araucaria heterophylla] >AJE70935.1 ATP synthase CF0 subunit III (plastid) [Callitropsis nootkatensis] >AJE71017.1 ATP synthase CF0 subunit III (plastid) [Cupressus sempervirens] >AJE71099.1 ATP synthase CF0 subunit III (plastid) [Hesperocyparis glabra] >AJE71180.1 ATP synthase CF0 subunit III (plastid) [Callitropsis vietnamensis] >AJF41958.1 ATPase III subunit (chloroplast) [Araucaria muelleri] >AJF42038.1 ATPase III subunit (chloroplast) [Araucaria scopulorum] >AJF42121.1 ATPase III subunit (chloroplast) [Araucaria muelleri] >AJF42201.1 ATPase III subunit (chloroplast) [Araucaria bernieri] >AJF42280.1 ATPase III subunit (chloroplast) [Araucaria luxurians] >AJF42362.1 ATPase III subunit (chloroplast) [Araucaria subulata] >AJF42444.1 ATPase III subunit (chloroplast) [Araucaria columnaris] >AJF42527.1 ATPase III subunit (chloroplast) [Araucaria rulei] >AJF42606.1 ATPase III subunit (chloroplast) [Araucaria scopulorum] >AJF42687.1 ATPase III subunit (chloroplast) [Araucaria columnaris] >AJF42769.1 ATPase III subunit (chloroplast) [Araucaria humboldtensis] >AJF42851.1 ATPase III subunit (chloroplast) [Araucaria biramulata] >AJF42925.1 ATPase III subunit (chloroplast) [Araucaria subulata] >AJF43013.1 ATPase III subunit (chloroplast) [Araucaria columnaris] >AJF43095.1 ATPase III subunit (chloroplast) [Araucaria biramulata] >AJF43177.1 ATPase III subunit (chloroplast) [Araucaria muelleri] >AJF43256.1 ATPase III subunit (chloroplast) [Araucaria subulata] >AJF43338.1 ATPase III subunit (chloroplast) [Araucaria montana] >AJF43420.1 ATPase III subunit (chloroplast) [Araucaria montana] >AJF43502.1 ATPase III subunit (chloroplast) [Araucaria laubenfelsii] >AJF43583.1 ATPase III subunit (chloroplast) [Araucaria schmidii] >AJF43666.1 ATPase III subunit (chloroplast) [Araucaria rulei] >AJF43745.1 ATPase III subunit (chloroplast) [Araucaria nemorosa] >AJF43826.1 ATPase III subunit (chloroplast) [Araucaria humboldtensis] >AJF43907.1 ATPase III subunit (chloroplast) [Araucaria bernieri] >AJF43988.1 ATPase III subunit (chloroplast) [Araucaria nemorosa] >AJF44070.1 ATPase III subunit (chloroplast) [Araucaria laubenfelsii] >AKE36636.1 ATP synthase CF0 C chain (chloroplast) [Wollemia nobilis] >AKM70801.1 ATP synthase CF0 subunit III (chloroplast) [Metasequoia glyptostroboides] >AKP55018.1 ATP synthase CF0 subunit III (chloroplast) [Amentotaxus argotaenia] >ALB36978.1 ATP synthase CF0 subunit III (chloroplast) [Sequoia sempervirens] >ALG65413.1 ATP synthase CF0 subunit III (chloroplast) [Cupressus gigantea] >ALI30997.1 ATP synthase CF0 subunit III (chloroplast) [Juniperus cedrus] >ALK00933.1 ATP synthase CF0 subunit III (chloroplast) [Taxus baccata] >ALK01142.1 ATP synthase CF0 subunit III (chloroplast) [Juniperus communis] >AMB21055.1 ATP synthase CF0 subunit III (chloroplast) [Torreya fargesii] >AMO00702.1 ATP synthase CF0 subunit III (chloroplast) [Sciadopitys verticillata] >ANT70598.1 ATP synthase CF0 subunit III (chloroplast) [Glyptostrobus pensilis] >AOQ30748.1 AtpH (chloroplast) [Taxus wallichiana var. chinensis] >BAW34567.1 ATP synthase CF0 C chain (chloroplast) [Sciadopitys verticillata] >APX55445.1 ATP synthase CF0 subunit III (chloroplast) [Torreya jackii] >AQM38801.1 ATP synthase CF0 subunit III (chloroplast) [Calocedrus formosana] >AQM38884.1 ATP synthase CF0 subunit III (chloroplast) [Calocedrus macrolepis] >AQM38977.1 ATP synthase CF0 subunit III (chloroplast) [Chamaecyparis lawsoniana] >AQM39060.1 ATP synthase CF0 subunit III (chloroplast) [Chamaecyparis hodginsii] >AQM39132.1 ATP synthase CF0 subunit III (chloroplast) [Hesperocyparis glabra] >AQM39225.1 ATP synthase CF0 subunit III (chloroplast) [Juniperus formosana] >AQM39298.1 ATP synthase CF0 subunit III (chloroplast) [Platycladus orientalis] >AQM39390.1 ATP synthase CF0 subunit III (chloroplast) [Thuja standishii] >AQM39463.1 ATP synthase CF0 subunit III (chloroplast) [Thujopsis dolabrata] >AQM39545.1 ATP synthase CF0 subunit III (chloroplast) [Callitropsis vietnamensis] >AQY15398.1 AtpH (chloroplast) [Podocarpus macrophyllus] >ARO91903.1 ATP synthase CF0 subunit III (chloroplast) [Cupressus chengiana] >ARR75289.1 AtpH (chloroplast) [Torreya grandis] >BAX56327.1 ATP synthase CF0 C chain (chloroplast) [Callitris rhomboidea] >BAX56347.1 ATP synthase CF0 C chain (chloroplast) [Taxodium distichum] >BAX56484.1 ATP synthase CF0 C chain (chloroplast) [Dacrycarpus imbricatus] >BAX56501.1 ATP synthase CF0 C chain (chloroplast) [Chamaecyparis formosensis] >AUS84538.1 ATP synthase CF0 subunit III (chloroplast) [Cupressus jiangeensis] >AUW35133.1 ATP synthase CF0 subunit III (chloroplast) [Chamaecyparis hodginsii] >AVI15526.1 ATP synthase CF0 subunit III (chloroplast) [Cephalotaxus sinensis] >AVK59595.1 ATP synthase CF0 subunit III (chloroplast) [Juniperus microsperma] >AVR43524.1 ATP synthase CF0 C chain (chloroplast) [Taiwania cryptomerioides] >AXC48249.1 ATP synthase CF0 C subunit (chloroplast) [Taxus fuana] >AXI97924.1 ATP synthase CF0 subunit III (plastid) [Araucaria angustifolia] >AXI98126.1 ATP synthase CF0 subunit III (chloroplast) [Cephalotaxus sinensis] >AXP33942.1 ATP synthase CF0 subunit III (plastid) [Cupressus tonkinensis] >AXP34024.1 ATP synthase CF0 subunit III (plastid) [Cupressus torulosa] >AXP34058.1 ATP synthase CF0 subunit III (plastid) [Hesperocyparis arizonica] >AXP34194.1 ATP synthase CF0 subunit III (plastid) [Hesperocyparis benthamii] >AXP34269.1 ATP synthase CF0 subunit III (plastid) [Hesperocyparis lindleyi] >AXP34351.1 ATP synthase CF0 subunit III (plastid) [Hesperocyparis lusitanica] >AXP34423.1 ATP synthase CF0 subunit III (plastid) [Juniperus communis])

HSP 1 Score: 129.8 bits (325), Expect = 4.2e-27
Identity = 74/81 (91.36%), Postives = 76/81 (93.83%), Query Frame = 0


Query: 1  MNPLISAAFVIAAGLAVGLAFIGLGVGQGTAAGQVVEGIARQPEEEGKIRGTLLLSLAFM 60
          MNPLISAA VIAAGL+VGLA IG G+GQGTAAGQ VEGIARQPE EGKIRGTLLLSLAFM
Sbjct: 1  MNPLISAASVIAAGLSVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFM 60

Query: 61 EALTIYGLVVALALLFANPFV 82
          EALTIYGLVVALALLFANPFV
Sbjct: 61 EALTIYGLVVALALLFANPFV 81

The following BLAST results are available for this feature:

BLAST of Bhi04G000739 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q1ACN0\|ATPH_CHAVU	1.0e-29	92.59	ATP synthase subunit c, chloroplastic OS=Chara vulgaris OX=55564 GN=atpH PE=3 SV...	[more]
sp\|B1VKH8\|ATPH_CRYJA	1.4e-29	91.36	ATP synthase subunit c, chloroplastic OS=Cryptomeria japonica OX=3369 GN=atpH PE...	[more]
sp\|Q7GUD2\|ATPH_PINKO	4.0e-29	91.36	ATP synthase subunit c, chloroplastic OS=Pinus koraiensis OX=88728 GN=atpH PE=3 ...	[more]
sp\|P41603\|ATPH_PINTH	4.0e-29	91.36	ATP synthase subunit c, chloroplastic OS=Pinus thunbergii OX=3350 GN=atpH PE=3 S...	[more]
sp\|A7M8Z1\|ATPH_CUSGR	1.2e-28	87.65	ATP synthase subunit C, plastid OS=Cuscuta gronovii OX=35886 GN=atpE PE=3 SV=1	[more]

BLAST of Bhi04G000739 vs. TAIR10


Match Name	E-value	Identity	Description
ATCG00140.1	3.2e-21	74.07	ATP synthase subunit C family protein	[more]

BLAST of Bhi04G000739 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2G3CRR6\|A0A2G3CRR6_CAPCH	9.5e-28	92.59	ATP synthase subunit c, chloroplastic OS=Capsicum chinense OX=80379 GN=BC332_064...	[more]
tr\|A0A2D1GRU3\|A0A2D1GRU3_9MAGN	2.1e-27	92.59	ATP synthase subunit c, chloroplastic OS=Taxillus chinensis OX=227909 GN=atpH PE...	[more]
tr\|A0A2D1GS51\|A0A2D1GS51_9MAGN	2.1e-27	92.59	ATP synthase subunit c, chloroplastic OS=Taxillus sutchuenensis OX=227910 GN=atp...	[more]
tr\|D3WCY5\|D3WCY5_XIMAM	2.1e-27	92.59	ATP synthase subunit c, chloroplastic OS=Ximenia americana OX=50174 GN=atpH PE=3...	[more]
tr\|G3XHF4\|G3XHF4_SCIVE	2.8e-27	91.36	ATP synthase subunit c, chloroplastic OS=Sciadopitys verticillata OX=28979 GN=at...	[more]

BLAST of Bhi04G000739 vs. NCBI nr


Match Name	E-value	Identity	Description
PHU21377.1	1.4e-27	92.59	ATP synthase subunit c, chloroplastic [Capsicum chinense]	[more]
YP_635717.1	3.2e-27	92.59	ATP synthase CF0 C subunit [Chara vulgaris] >YP_009442318.1 ATP synthase CF0 C s...	[more]
YP_008994555.1	4.2e-27	91.36	ATP synthase CF0 subunit III (chloroplast) (chloroplast) [Pelargonium alternans]...	[more]
YP_009057760.1	4.2e-27	91.36	CF0 subunit III of ATP synthase (chloroplast) [Picocystis salinarum] >AID67582.1...	[more]
YP_001806691.1	4.2e-27	91.36	ATP synthase CF0 C subunit [Cryptomeria japonica] >YP_004891346.1 ATP synthase C...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain
GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)

Vocabulary: **Biological Process**
Term	Definition
GO:0015991	ATP hydrolysis coupled proton transport
GO:0015986	ATP synthesis coupled proton transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0015078	hydrogen ion transmembrane transporter activity

Vocabulary: **INTERPRO**
Term	Definition
IPR035921	F/V-ATP_Csub_sf
IPR020537	ATP_synth_F0_csu_DDCD_BS
IPR005953	ATP_synth_csu_bac/chlpt
IPR002379	ATPase_proteolipid_c-like_dom
IPR038662	ATP_synth_F0_csu_sf
IPR000454	ATP_synth_F0_csu

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
biological_process	GO:0006412	translation
biological_process	GO:0015991	ATP hydrolysis coupled proton transport
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0042170	plastid membrane
cellular_component	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)
cellular_component	GO:0015935	small ribosomal subunit
cellular_component	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain
molecular_function	GO:0008289	lipid binding
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0015078	hydrogen ion transmembrane transporter activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi04M000739	Bhi04M000739	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000454	ATP synthase, F0 complex, subunit C	PRINTS	PR00124	ATPASEC	coord: 12..31 score: 39.22 coord: 33..48 score: 40.26 coord: 50..75 score: 44.46
IPR000454	ATP synthase, F0 complex, subunit C	PANTHER	PTHR10031	ATP SYNTHASE LIPID-BINDING PROTEIN, MITOCHONDRIAL	coord: 1..79
IPR000454	ATP synthase, F0 complex, subunit C	HAMAP	MF_01396	ATP_synth_c_bact	coord: 10..75 score: 14.259
IPR038662	F1F0 ATP synthase subunit C superfamily	GENE3D	G3DSA:1.20.20.10		coord: 3..81 e-value: 5.1E-33 score: 115.0
IPR002379	V-ATPase proteolipid subunit C-like domain	PFAM	PF00137	ATP-synt_C	coord: 11..73 e-value: 3.9E-18 score: 65.4
IPR005953	ATP synthase, F0 complex, subunit C, bacterial/chloroplast	TIGRFAM	TIGR01260	TIGR01260	coord: 20..77 e-value: 2.0E-17 score: 61.0
None	No IPR available	PANTHER	PTHR10031:SF6	ATP SYNTHASE SUBUNIT C, CHLOROPLASTIC	coord: 1..79
IPR020537	ATP synthase, F0 complex, subunit C, DCCD-binding site	PROSITE	PS00605	ATPASE_C	coord: 40..61
IPR035921	F/V-ATP synthase subunit C superfamily	SUPERFAMILY	SSF81333	F1F0 ATP synthase subunit C	coord: 3..79

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi04G000739	Cucumber (Gy14) v1	cgywgoB317
Bhi04G000739	Cucumber (Gy14) v2	cgybwgoB160
Bhi04G000739	Cucumber (Gy14) v2	cgybwgoB308
Bhi04G000739	Cucurbita maxima (Rimu)	cmawgoB0021
Bhi04G000739	Cucurbita maxima (Rimu)	cmawgoB0198
Bhi04G000739	Cucurbita maxima (Rimu)	cmawgoB0944
Bhi04G000739	Cucurbita moschata (Rifu)	cmowgoB0014
Bhi04G000739	Cucurbita moschata (Rifu)	cmowgoB0196
Bhi04G000739	Cucurbita moschata (Rifu)	cmowgoB0946
Bhi04G000739	Cucurbita pepo (Zucchini)	cpewgoB0143
Bhi04G000739	Cucurbita pepo (Zucchini)	cpewgoB0985
Bhi04G000739	Cucurbita pepo (Zucchini)	cpewgoB1032
Bhi04G000739	Wild cucumber (PI 183967)	cpiwgoB162
Bhi04G000739	Cucumber (Chinese Long) v3	cucwgoB172
Bhi04G000739	Cucumber (Chinese Long) v2	cuwgoB165
Bhi04G000739	Bottle gourd (USVL1VR-Ls)	lsiwgoB369
Bhi04G000739	Bottle gourd (USVL1VR-Ls)	lsiwgoB605
Bhi04G000739	Melon (DHL92) v3.6.1	medwgoB323
Bhi04G000739	Melon (DHL92) v3.5.1	mewgoB325
Bhi04G000739	Watermelon (Charleston Gray)	wcgwgoB627
Bhi04G000739	Watermelon (97103) v2	wgowmbB296
Bhi04G000739	Watermelon (97103) v2	wgowmbB328
Bhi04G000739	Watermelon (97103) v1	wgowmB311
Bhi04G000739	Silver-seed gourd	carwgoB0068
Bhi04G000739	Silver-seed gourd	carwgoB0751