Bhi04G000526 (gene) Wax gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGCCCGAGGCTTTCACCATTGTCATTGCTCCAACAGATGCATCAAGGTACCCACCCAAGTGCCAATTTGTGAAATTTAATTGTTGTGTCCAAGTTATAATTGAGATGGTGAAAGCCGATGTGGTTTAGGAGCTTTGGAATATTTCGACCGACTGATCCCGGTGGGATGAAGATCCTGAGAGAGTTTCAAGAGGATGGTTTTCACCCTCACAAAGATCCAGAAGATGGCAGCAACCCCATTTACGAGCTCCAACAATCTAACTTAAGATTTGAAATTATTGACTCGCGATCTTAA ATGGTGCCCGAGGCTTTCACCATTGTCATTGCTCCAACAGATGCATCAAGGAGCTTTGGAATATTTCGACCGACTGATCCCGGTGGGATGAAGATCCTGAGAGAGTTTCAAGAGGATGGTTTTCACCCTCACAAAGATCCAGAAGATGGCAGCAACCCCATTTACGAGCTCCAACAATCTAACTTAAGATTTGAAATTATTGACTCGCGATCTTAA ATGGTGCCCGAGGCTTTCACCATTGTCATTGCTCCAACAGATGCATCAAGGAGCTTTGGAATATTTCGACCGACTGATCCCGGTGGGATGAAGATCCTGAGAGAGTTTCAAGAGGATGGTTTTCACCCTCACAAAGATCCAGAAGATGGCAGCAACCCCATTTACGAGCTCCAACAATCTAACTTAAGATTTGAAATTATTGACTCGCGATCTTAA MVPEAFTIVIAPTDASRSFGIFRPTDPGGMKILREFQEDGFHPHKDPEDGSNPIYELQQSNLRFEIIDSRS
BLAST of Bhi04G000526 vs. Swiss-Prot
Match: sp|Q6NKP9|AMSH2_ARATH (AMSH-like ubiquitin thioesterase 2 OS=Arabidopsis thaliana OX=3702 GN=AMSH2 PE=2 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 3.5e-21 Identity = 49/75 (65.33%), Postives = 59/75 (78.67%), Query Frame = 0
BLAST of Bhi04G000526 vs. Swiss-Prot
Match: sp|Q8VYB5|AMSH1_ARATH (AMSH-like ubiquitin thioesterase 1 OS=Arabidopsis thaliana OX=3702 GN=AMSH1 PE=2 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 2.7e-13 Identity = 38/75 (50.67%), Postives = 47/75 (62.67%), Query Frame = 0
BLAST of Bhi04G000526 vs. Swiss-Prot
Match: sp|Q5PNU3|AMSH3_ARATH (AMSH-like ubiquitin thioesterase 3 OS=Arabidopsis thaliana OX=3702 GN=AMSH3 PE=1 SV=2) HSP 1 Score: 75.1 bits (183), Expect = 3.5e-13 Identity = 36/75 (48.00%), Postives = 50/75 (66.67%), Query Frame = 0
BLAST of Bhi04G000526 vs. TAIR10
Match: AT1G10600.1 (associated molecule with the SH3 domain of STAM 2) HSP 1 Score: 101.7 bits (252), Expect = 1.9e-22 Identity = 49/75 (65.33%), Postives = 59/75 (78.67%), Query Frame = 0
BLAST of Bhi04G000526 vs. TAIR10
Match: AT1G48790.1 (associated molecule with the SH3 domain of STAM 1) HSP 1 Score: 75.5 bits (184), Expect = 1.5e-14 Identity = 38/75 (50.67%), Postives = 47/75 (62.67%), Query Frame = 0
BLAST of Bhi04G000526 vs. TAIR10
Match: AT4G16144.1 (associated molecule with the SH3 domain of STAM 3) HSP 1 Score: 75.1 bits (183), Expect = 1.9e-14 Identity = 36/75 (48.00%), Postives = 50/75 (66.67%), Query Frame = 0
BLAST of Bhi04G000526 vs. TrEMBL
Match: tr|M4DTS2|M4DTS2_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis OX=51351 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 2.4e-19 Identity = 51/75 (68.00%), Postives = 59/75 (78.67%), Query Frame = 0
BLAST of Bhi04G000526 vs. TrEMBL
Match: tr|W9RCX3|W9RCX3_9ROSA (AMSH-like ubiquitin thioesterase 2 OS=Morus notabilis OX=981085 GN=L484_027771 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 7.1e-19 Identity = 50/75 (66.67%), Postives = 59/75 (78.67%), Query Frame = 0
BLAST of Bhi04G000526 vs. TrEMBL
Match: tr|A0A178W3T5|A0A178W3T5_ARATH (AMSH2 OS=Arabidopsis thaliana OX=3702 GN=AXX17_At1g10730 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 7.1e-19 Identity = 49/75 (65.33%), Postives = 59/75 (78.67%), Query Frame = 0
BLAST of Bhi04G000526 vs. TrEMBL
Match: tr|A0A2P5FMB7|A0A2P5FMB7_9ROSA (JAB1/MPN/MOV34 metalloenzyme domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_051880 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 1.2e-18 Identity = 51/75 (68.00%), Postives = 58/75 (77.33%), Query Frame = 0
BLAST of Bhi04G000526 vs. TrEMBL
Match: tr|R0GN48|R0GN48_9BRAS (Uncharacterized protein OS=Capsella rubella OX=81985 GN=CARUB_v10011162mg PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 1.6e-18 Identity = 48/75 (64.00%), Postives = 59/75 (78.67%), Query Frame = 0
BLAST of Bhi04G000526 vs. NCBI nr
Match: XP_023545741.1 (AMSH-like ubiquitin thioesterase 2 isoform X3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 122.1 bits (305), Expect = 7.7e-25 Identity = 63/76 (82.89%), Postives = 65/76 (85.53%), Query Frame = 0
BLAST of Bhi04G000526 vs. NCBI nr
Match: XP_023545749.1 (AMSH-like ubiquitin thioesterase 2 isoform X8 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 122.1 bits (305), Expect = 7.7e-25 Identity = 63/76 (82.89%), Postives = 65/76 (85.53%), Query Frame = 0
BLAST of Bhi04G000526 vs. NCBI nr
Match: XP_023545750.1 (AMSH-like ubiquitin thioesterase 2 isoform X9 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 122.1 bits (305), Expect = 7.7e-25 Identity = 63/76 (82.89%), Postives = 65/76 (85.53%), Query Frame = 0
BLAST of Bhi04G000526 vs. NCBI nr
Match: XP_023545745.1 (AMSH-like ubiquitin thioesterase 2 isoform X6 [Cucurbita pepo subsp. pepo] >XP_023545746.1 AMSH-like ubiquitin thioesterase 2 isoform X6 [Cucurbita pepo subsp. pepo] >XP_023545747.1 AMSH-like ubiquitin thioesterase 2 isoform X6 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 122.1 bits (305), Expect = 7.7e-25 Identity = 63/76 (82.89%), Postives = 65/76 (85.53%), Query Frame = 0
BLAST of Bhi04G000526 vs. NCBI nr
Match: XP_023545743.1 (AMSH-like ubiquitin thioesterase 2 isoform X5 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 122.1 bits (305), Expect = 7.7e-25 Identity = 63/76 (82.89%), Postives = 65/76 (85.53%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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