Bhi04G000387 (gene) Wax gourd

Overview
NameBhi04G000387
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr4 : 10591628 .. 10593172 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTGGAAGGAACAATGGCTTGCACACAAAAGGGCTATTGCTGATCGAGAGCGCCATGTTGCACCAAAAAAGGAGGTTTGTGTTTCTATTGTTTTGTTCTAAATAGAAGCTTTCATGAACATTGAGGCATATTATTATTCTTTTGCTTTTTATTTGAAGAGCTTATGGCTGTTAACTATTACCTGTTAATGAAAAACAAGTTTTTAAATATGCCATGTGTAATACAAATTGAACCGGAACTTTCTAAAAGATGAGGATGATATTCCAGCTGTTGTGTCATTATTGAGACGAACTTTTGATAGGACGAAGAGATTGCCAAGCATGAATTAATATTATGAATTTCTTATATATGAATGACTGGAATCTGTATATACAACTTACCTTCTCTGTCATTGAACATTCATTAAGTCCTTTCAAGTCCTGTTGTTCAAAGATTTGGTATTGTGTGCCTTTTCAAATATAAGTTATTTATTTGCATTATGTGCGTAAGTTCATGCTGCATTGCTTTTAAGAAAATATTGGTCATGGGGATGGCTTGCTATACTTTAAATTAAAGTTTCTTGTAGGACCACAGTTTTGTTTAGTCACTTACAAATTCATTTCCTTGTCCTCCAATCCCTGGTTAACATGGTTGCCTTGGACTCGTGTTAAGTTCTTAGATCCAAGATTTCTCTTTTATATTTATGCACTGATATAAAAAGTTGAAATCCCAGATATCCAAGGAAGCAAAGGAAGGGAAGGAAGGTACTTTTCTTTTGTTTATCTACTTAAAAGACACTATTGACTTTATTATATTTACTACTAAAATGTTCACATCCCCTTGCTATTTATTTTCGTAGTCAAAGAAATGGAATCAACAAAAGATACTAAATGCATTGATAAGCTTGAAAAAGAGGCAGGCCGACATAGATAAAAAGGAAAAGAGTGACAAAGGGGACAAAGGGAATACATCCGAGGGAAGGGGTAATGTAAGTAGCACAAAACTTGAAAGCAATGATGCAGAAGAAAGAGGCAGAAAGCTCAAAATGTTGAGAAACCAGATCAAGGAGAAGTAGCTGGTGGTACACAGAAAAGTGGCACTGTGAAATCTAGAAAAAAAAAGATTGTCAAGAGAATTGTCAAACAAAAGGCCAAAATAGTTGGTGATACAGCCAGCAAGAAAAATGAAAAACTGGATGAAAAGGTTGATGGAGAGCAGAACTCTGACATTCCATCGGATCAACCTTCAAATGATGTTGCGGCTGTCAAGACACCTGGAAAGAAAAAAGTAATTAAACGGGTGGGAAAATGTCCTCACAATGAAAAAAATAAAGATGTACTTCCGAAAGTAGAAAACGAAATGGACTGCTCTGAGGATAAGTCTAAGGATAATTCAGATCCTAATGCAACAGTAGGTCAAGATACTGTTGTGAGAACAACGGTAAAAAAGAAAGTAATTAAGAGGGTCCTAAAAAGAAAGTTACTGTCGAGGAAGCTTCTAAAAAAGGTGAAGATGGTGATGGGAGCGAGAAGAAGGTTACAACAGATGAAACACAGAATGTAG

mRNA sequence

ATGTGTGGAAGGAACAATGGCTTGCACACAAAAGGGCTATTGCTGATCGAGAGCGCCATGTTGCACCAAAAAAGGAGAAGAAAGAGGCAGAAAGCTCAAAATGTTGAGAAACCAGATCAAGGAGAAGTAGCTGGTGGTACACAGAAAAGTGGCACTGTGAAATCTAGAAAAAAAAAGATTGTCAAGAGAATTGTCAAACAAAAGGCCAAAATAGTTGGTGATACAGCCAGCAAGAAAAATGAAAAACTGGATGAAAAGGTTGATGGAGAGCAGAACTCTGACATTCCATCGGATCAACCTTCAAATGATGTTGCGGCTGTCAAGACACCTGGAAAGAAAAAAGTAATTAAACGGGTGGGAAAATGTCCTCACAATGAAAAAAATAAAGATGTACTTCCGAAAGTAGAAAACGAAATGGACTGCTCTGAGGATAAGTCTAAGGATAATTCAGATCCTAATGCAACAGTAGGTCAAGATACTGTTGTGAGAACAACGGTAAAAAAGAAAGTAATTAAGAGGGTCCTAAAAAGAAAGTTACTGTCGAGGAAGCTTCTAAAAAAGGTGAAGATGGTGATGGGAGCGAGAAGAAGGTTACAACAGATGAAACACAGAATGTAG

Coding sequence (CDS)

ATGTGTGGAAGGAACAATGGCTTGCACACAAAAGGGCTATTGCTGATCGAGAGCGCCATGTTGCACCAAAAAAGGAGAAGAAAGAGGCAGAAAGCTCAAAATGTTGAGAAACCAGATCAAGGAGAAGTAGCTGGTGGTACACAGAAAAGTGGCACTGTGAAATCTAGAAAAAAAAAGATTGTCAAGAGAATTGTCAAACAAAAGGCCAAAATAGTTGGTGATACAGCCAGCAAGAAAAATGAAAAACTGGATGAAAAGGTTGATGGAGAGCAGAACTCTGACATTCCATCGGATCAACCTTCAAATGATGTTGCGGCTGTCAAGACACCTGGAAAGAAAAAAGTAATTAAACGGGTGGGAAAATGTCCTCACAATGAAAAAAATAAAGATGTACTTCCGAAAGTAGAAAACGAAATGGACTGCTCTGAGGATAAGTCTAAGGATAATTCAGATCCTAATGCAACAGTAGGTCAAGATACTGTTGTGAGAACAACGGTAAAAAAGAAAGTAATTAAGAGGGTCCTAAAAAGAAAGTTACTGTCGAGGAAGCTTCTAAAAAAGGTGAAGATGGTGATGGGAGCGAGAAGAAGGTTACAACAGATGAAACACAGAATGTAG

Protein sequence

MCGRNNGLHTKGLLLIESAMLHQKRRRKRQKAQNVEKPDQGEVAGGTQKSGTVKSRKKKIVKRIVKQKAKIVGDTASKKNEKLDEKVDGEQNSDIPSDQPSNDVAAVKTPGKKKVIKRVGKCPHNEKNKDVLPKVENEMDCSEDKSKDNSDPNATVGQDTVVRTTVKKKVIKRVLKRKLLSRKLLKKVKMVMGARRRLQQMKHRM
Homology
[Close]
BLAST of Bhi04G000387 vs. NCBI nr
Match: XP_022951293.1 (cell division cycle and apoptosis regulator protein 1-like [Cucurbita moschata])

HSP 1 Score: 62.4 bits (150), Expect = 2.1e-06
Identity = 94/137 (68.61%), Postives = 99/137 (72.26%), Query Frame = 0 

Query: 3   GRNNGLHTKGLLLIESAMLHQKRRRKRQKAQNVEKPDQGEVAGGTQKSGTVKSRKKXXXX 62
           GR NG  TK    +ES    +       +AQNVEKPDQ EV GGTQKSGTV     XXXX
Sbjct: 766 GRGNGSSTK----LES----KXXXXXXXEAQNVEKPDQEEVDGGTQKSGTVXXXXXXXXX 825

Query: 63  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVKTPGKKKVIKRVGKC 122
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      VKT  +KKVI+RV K 
Sbjct: 826 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNDSAGVKTFARKKVIRRVAKS 885

Query: 123 PHNEKNKDVLPKVENEM 140
             NEKNKDVLPK ENEM
Sbjct: 886 DQNEKNKDVLPKEENEM 894

[Close]
BLAST of Bhi04G000387 vs. NCBI nr
Match: XP_022973267.1 (cell division cycle and apoptosis regulator protein 1-like [Cucurbita maxima])

HSP 1 Score: 61.6 bits (148), Expect = 3.5e-06
Identity = 94/137 (68.61%), Postives = 99/137 (72.26%), Query Frame = 0 

Query: 3   GRNNGLHTKGLLLIESAMLHQKRRRKRQKAQNVEKPDQGEVAGGTQKSGTVKSRKKXXXX 62
           GR NG  TK    +ES    +       +AQNVEKPDQ EV GGTQKSGTV     XXXX
Sbjct: 766 GRGNGSSTK----LES----KXXXXXXXEAQNVEKPDQEEVDGGTQKSGTVXXXXXXXXX 825

Query: 63  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVKTPGKKKVIKRVGKC 122
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      VKT  +KKVI+RV K 
Sbjct: 826 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNDSAGVKTFARKKVIRRVAKN 885

Query: 123 PHNEKNKDVLPKVENEM 140
             NEKNKDVLPK ENEM
Sbjct: 886 DQNEKNKDVLPKEENEM 894

[Close]
BLAST of Bhi04G000387 vs. NCBI nr
Match: XP_022999053.1 (cell division cycle and apoptosis regulator protein 1-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 59.3 bits (142), Expect = 1.8e-05
Identity = 49/103 (47.57%), Postives = 51/103 (49.51%), Query Frame = 0 

Query: 38  PDQGEVAGGTQKSGTVKSRKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 97
           PDQ EVAG TQK GTVKS KK      XXXX                             
Sbjct: 769 PDQVEVAGDTQKVGTVKSGKK--KIVKXXXXKAKTVGDVASKNNVKLDEKASGENSDIPS 828

Query: 98  XXXXXXXXAVKTPGKKKVIKRVGKCP-HNEKNKDVLPKVENEM 140
                   AVKT G+KKV KRVGK P  NEKNKD+LPKVENEM
Sbjct: 829 DQPSSDSPAVKTFGRKKVTKRVGKSPSQNEKNKDILPKVENEM 869

[Close]
BLAST of Bhi04G000387 vs. NCBI nr
Match: XP_023520585.1 (cell division cycle and apoptosis regulator protein 1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 57.8 bits (138), Expect = 5.1e-05
Identity = 28/34 (82.35%), Postives = 30/34 (88.24%), Query Frame = 0 

Query: 106 AVKTPGKKKVIKRVGKCPHNEKNKDVLPKVENEM 140
           AVKT G+KKV KRVGK P NEKNKD+LPKVENEM
Sbjct: 840 AVKTFGRKKVTKRVGKSPQNEKNKDILPKVENEM 873

[Close]
BLAST of Bhi04G000387 vs. NCBI nr
Match: XP_023520583.1 (cell division cycle and apoptosis regulator protein 1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023520584.1 cell division cycle and apoptosis regulator protein 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 57.8 bits (138), Expect = 5.1e-05
Identity = 28/34 (82.35%), Postives = 30/34 (88.24%), Query Frame = 0 

Query: 106 AVKTPGKKKVIKRVGKCPHNEKNKDVLPKVENEM 140
           AVKT G+KKV KRVGK P NEKNKD+LPKVENEM
Sbjct: 840 AVKTFGRKKVTKRVGKSPQNEKNKDILPKVENEM 873

The following BLAST results are available for this feature:
BLAST of Bhi04G000387 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi04G000387 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi04G000387 vs. TrEMBL
Match NameE-valueIdentityDescription
BLAST of Bhi04G000387 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022951293.12.1e-0668.61cell division cycle and apoptosis regulator protein 1-like [Cucurbita moschata][more]
XP_022973267.13.5e-0668.61cell division cycle and apoptosis regulator protein 1-like [Cucurbita maxima][more]
XP_022999053.11.8e-0547.57cell division cycle and apoptosis regulator protein 1-like isoform X2 [Cucurbita... [more]
XP_023520585.15.1e-0582.35cell division cycle and apoptosis regulator protein 1-like isoform X2 [Cucurbita... [more]
XP_023520583.15.1e-0582.35cell division cycle and apoptosis regulator protein 1-like isoform X1 [Cucurbita... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi04M000387Bhi04M000387mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..157
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..150

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi04G000387Wax gourdwgowgoB078
Bhi04G000387Wax gourdwgowgoB096
Bhi04G000387Cucumber (Gy14) v1cgywgoB146
Bhi04G000387Cucumber (Gy14) v1cgywgoB452
Bhi04G000387Cucumber (Gy14) v1cgywgoB702
Bhi04G000387Cucumber (Gy14) v1cgywgoB784
Bhi04G000387Cucumber (Gy14) v2cgybwgoB157
Bhi04G000387Cucumber (Gy14) v2cgybwgoB368
Bhi04G000387Cucumber (Gy14) v2cgybwgoB548
Bhi04G000387Cucumber (Gy14) v2cgybwgoB649
Bhi04G000387Cucurbita maxima (Rimu)cmawgoB0014
Bhi04G000387Cucurbita maxima (Rimu)cmawgoB0129
Bhi04G000387Cucurbita maxima (Rimu)cmawgoB0194
Bhi04G000387Cucurbita maxima (Rimu)cmawgoB0576
Bhi04G000387Cucurbita maxima (Rimu)cmawgoB0664
Bhi04G000387Cucurbita maxima (Rimu)cmawgoB0781
Bhi04G000387Cucurbita maxima (Rimu)cmawgoB0875
Bhi04G000387Cucurbita maxima (Rimu)cmawgoB0943
Bhi04G000387Cucurbita maxima (Rimu)cmawgoB1051
Bhi04G000387Cucurbita moschata (Rifu)cmowgoB0005
Bhi04G000387Cucurbita moschata (Rifu)cmowgoB0124
Bhi04G000387Cucurbita moschata (Rifu)cmowgoB0190
Bhi04G000387Cucurbita moschata (Rifu)cmowgoB0570
Bhi04G000387Cucurbita moschata (Rifu)cmowgoB0775
Bhi04G000387Cucurbita moschata (Rifu)cmowgoB0872
Bhi04G000387Cucurbita moschata (Rifu)cmowgoB0944
Bhi04G000387Cucurbita moschata (Rifu)cmowgoB1044
Bhi04G000387Cucurbita pepo (Zucchini)cpewgoB0074
Bhi04G000387Cucurbita pepo (Zucchini)cpewgoB0141
Bhi04G000387Cucurbita pepo (Zucchini)cpewgoB0335
Bhi04G000387Cucurbita pepo (Zucchini)cpewgoB0539
Bhi04G000387Cucurbita pepo (Zucchini)cpewgoB0589
Bhi04G000387Cucurbita pepo (Zucchini)cpewgoB0684
Bhi04G000387Cucurbita pepo (Zucchini)cpewgoB0860
Bhi04G000387Cucurbita pepo (Zucchini)cpewgoB0976
Bhi04G000387Cucurbita pepo (Zucchini)cpewgoB1028
Bhi04G000387Wild cucumber (PI 183967)cpiwgoB159
Bhi04G000387Wild cucumber (PI 183967)cpiwgoB388
Bhi04G000387Wild cucumber (PI 183967)cpiwgoB582
Bhi04G000387Wild cucumber (PI 183967)cpiwgoB689
Bhi04G000387Cucumber (Chinese Long) v3cucwgoB169
Bhi04G000387Cucumber (Chinese Long) v3cucwgoB390
Bhi04G000387Cucumber (Chinese Long) v3cucwgoB596
Bhi04G000387Cucumber (Chinese Long) v3cucwgoB702
Bhi04G000387Cucumber (Chinese Long) v2cuwgoB162
Bhi04G000387Cucumber (Chinese Long) v2cuwgoB385
Bhi04G000387Cucumber (Chinese Long) v2cuwgoB577
Bhi04G000387Cucumber (Chinese Long) v2cuwgoB678
Bhi04G000387Bottle gourd (USVL1VR-Ls)lsiwgoB156
Bhi04G000387Bottle gourd (USVL1VR-Ls)lsiwgoB323
Bhi04G000387Bottle gourd (USVL1VR-Ls)lsiwgoB363
Bhi04G000387Bottle gourd (USVL1VR-Ls)lsiwgoB591
Bhi04G000387Melon (DHL92) v3.6.1medwgoB228
Bhi04G000387Melon (DHL92) v3.6.1medwgoB321
Bhi04G000387Melon (DHL92) v3.6.1medwgoB594
Bhi04G000387Melon (DHL92) v3.6.1medwgoB630
Bhi04G000387Melon (DHL92) v3.5.1mewgoB228
Bhi04G000387Melon (DHL92) v3.5.1mewgoB322
Bhi04G000387Melon (DHL92) v3.5.1mewgoB588
Bhi04G000387Melon (DHL92) v3.5.1mewgoB624
Bhi04G000387Watermelon (Charleston Gray)wcgwgoB217
Bhi04G000387Watermelon (Charleston Gray)wcgwgoB281
Bhi04G000387Watermelon (Charleston Gray)wcgwgoB452
Bhi04G000387Watermelon (Charleston Gray)wcgwgoB612
Bhi04G000387Watermelon (97103) v2wgowmbB285
Bhi04G000387Watermelon (97103) v2wgowmbB297
Bhi04G000387Watermelon (97103) v2wgowmbB301
Bhi04G000387Watermelon (97103) v2wgowmbB313
Bhi04G000387Watermelon (97103) v1wgowmB297
Bhi04G000387Watermelon (97103) v1wgowmB329
Bhi04G000387Watermelon (97103) v1wgowmB339
Bhi04G000387Silver-seed gourdcarwgoB0001
Bhi04G000387Silver-seed gourdcarwgoB0231
Bhi04G000387Silver-seed gourdcarwgoB0404
Bhi04G000387Silver-seed gourdcarwgoB0463
Bhi04G000387Silver-seed gourdcarwgoB0487
Bhi04G000387Silver-seed gourdcarwgoB0551
Bhi04G000387Silver-seed gourdcarwgoB0552
Bhi04G000387Silver-seed gourdcarwgoB0902