Bhi04G000309 (gene) Wax gourd

NameBhi04G000309
Typegene
OrganismBenincasa hispida (Wax gourd)
Descriptioncalcium-binding protein-like
Locationchr4 : 8051011 .. 8051415 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGGTCATTTTCTTGCACTCCAAAGACCTCTATCGGAGAAGGAAGCAAACCTGGTGCTTGAGATGCGCGACATCAATGGCGACGGAGTTCTTGATAAGCAGGAATTGATGGCTGACTTGACACAGATTAACGTGAAACCCTGTACAACCTTACCAAATATGCATCTTACAAGGGAAGAGATCAGAGAAATTTTCACAGGATTCGACATTGACGGCGATGGTTTTCTCAATAAGAACGAGTTAACACAGGCCTTCGGTATGGTGGGTTCATACGCCCCACTGTTTAAAGCTCACTACGCCATGGTTCATGCTGATGATGATGGCGATGGTCTCATTAGCGAGTCTGAACTTAATAAACTCATCGATTATGTTGAGAAAACCAACAGGAGGAGGTTAAATTAA

mRNA sequence

ATGGAAGGTCATTTTCTTGCACTCCAAAGACCTCTATCGGAGAAGGAAGCAAACCTGGTGCTTGAGATGCGCGACATCAATGGCGACGGAGTTCTTGATAAGCAGGAATTGATGGCTGACTTGACACAGATTAACGTGAAACCCTGTACAACCTTACCAAATATGCATCTTACAAGGGAAGAGATCAGAGAAATTTTCACAGGATTCGACATTGACGGCGATGGTTTTCTCAATAAGAACGAGTTAACACAGGCCTTCGGTATGGTGGGTTCATACGCCCCACTGTTTAAAGCTCACTACGCCATGGTTCATGCTGATGATGATGGCGATGGTCTCATTAGCGAGTCTGAACTTAATAAACTCATCGATTATGTTGAGAAAACCAACAGGAGGAGGTTAAATTAA

Coding sequence (CDS)

ATGGAAGGTCATTTTCTTGCACTCCAAAGACCTCTATCGGAGAAGGAAGCAAACCTGGTGCTTGAGATGCGCGACATCAATGGCGACGGAGTTCTTGATAAGCAGGAATTGATGGCTGACTTGACACAGATTAACGTGAAACCCTGTACAACCTTACCAAATATGCATCTTACAAGGGAAGAGATCAGAGAAATTTTCACAGGATTCGACATTGACGGCGATGGTTTTCTCAATAAGAACGAGTTAACACAGGCCTTCGGTATGGTGGGTTCATACGCCCCACTGTTTAAAGCTCACTACGCCATGGTTCATGCTGATGATGATGGCGATGGTCTCATTAGCGAGTCTGAACTTAATAAACTCATCGATTATGTTGAGAAAACCAACAGGAGGAGGTTAAATTAA

Protein sequence

MEGHFLALQRPLSEKEANLVLEMRDINGDGVLDKQELMADLTQINVKPCTTLPNMHLTREEIREIFTGFDIDGDGFLNKNELTQAFGMVGSYAPLFKAHYAMVHADDDGDGLISESELNKLIDYVEKTNRRRLN
BLAST of Bhi04G000309 vs. TrEMBL
Match: tr|A0A0A0LP46|A0A0A0LP46_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G358880 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 4.7e-40
Identity = 90/131 (68.70%), Postives = 102/131 (77.86%), Query Frame = 0

Query: 5   FLALQRPLSEKEANLVLEMRDINGDGVLDKQELMADLTQINVKPCTTLPNMHLTREEIRE 64
           F+ALQ+PLSEKEANL+LEMRD NGDGVLDKQELMADLT  N KP T+L +M LTREEI+E
Sbjct: 7   FVALQKPLSEKEANLLLEMRDANGDGVLDKQELMADLTHTNKKPSTSLQDMKLTREEIKE 66

Query: 65  IFTGFXXXXXXXXXXXXXTQAFGMVGSYAPLFKAHYAMVHADDDGDGLISESELNKLIDY 124
           IF GF              QAFGM+GS +P+ KAHYAM  AD+DGDG ISE ELNKLIDY
Sbjct: 67  IFVGFDIDGDGFLSKNEVIQAFGMMGSCSPIMKAHYAMACADEDGDGRISEPELNKLIDY 126

Query: 125 VEKT-NRRRLN 135
           V++T NRRRLN
Sbjct: 127 VQRTINRRRLN 137

BLAST of Bhi04G000309 vs. TrEMBL
Match: tr|A0A1S3BD12|A0A1S3BD12_CUCME (probable calcium-binding protein CML36 OS=Cucumis melo OX=3656 GN=LOC103488542 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.1e-36
Identity = 98/131 (74.81%), Postives = 106/131 (80.92%), Query Frame = 0

Query: 5   FLALQRPLSEKEANLVLEMRDINGDGVLDKQELMADLTQINVKPCTTLPNMHLTREEIRE 64
           FLALQ+PLSEKEANLV +MRD NGDG+LDKQELM DLT  N KP T LPNM LTRE    
Sbjct: 7   FLALQKPLSEKEANLVFKMRDANGDGILDKQELMTDLTHANKKPSTNLPNMKLTREXXXX 66

Query: 65  IFTGFXXXXXXXXXXXXXTQAFGMVGSYAPLFKAHYAMVHADDDGDGLISESELNKLIDY 124
                XXXXXXXXXXXXX QAFGM+GSY+PL K HYAM  AD+DGDGLISE ELNKLIDY
Sbjct: 67  XXXXXXXXXXXXXXXXXXXQAFGMMGSYSPLLKTHYAMACADEDGDGLISECELNKLIDY 126

Query: 125 VEKT-NRRRLN 135
           V++T NRRRLN
Sbjct: 127 VQRTNNRRRLN 137

BLAST of Bhi04G000309 vs. TrEMBL
Match: tr|A0A1S3BDW2|A0A1S3BDW2_CUCME (probable calcium-binding protein CML11 OS=Cucumis melo OX=3656 GN=LOC103488544 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.7e-11
Identity = 54/155 (34.84%), Postives = 74/155 (47.74%), Query Frame = 0

Query: 16  EANLVLEMRDINGDGVLDKQELM-----ADLTQINVKPCTTLP----------------- 75
           EA+ +++  D NGDGVL K+EL      A L  I     +T+P                 
Sbjct: 13  EASELIKKYDRNGDGVLTKEELQSFLHDARLKNIRFVSSSTIPKTNENLDQKVSSNTRIK 72

Query: 76  ----------------NMHLTREEIREIFTGFXXXXXXXXXXXXXTQAFGMVGSYAPLFK 133
                           N+ L+RE+I+EIF                T+AFG +GS  P  K
Sbjct: 73  PKKQLLDKAQDSLRQSNVPLSREQIKEIFKYHDSNKDGFLSIRELTKAFGSLGSIVPFAK 132

BLAST of Bhi04G000309 vs. TrEMBL
Match: tr|A0A0A0LRC8|A0A0A0LRC8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359950 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.8e-10
Identity = 54/162 (33.33%), Postives = 75/162 (46.30%), Query Frame = 0

Query: 13  SEKEANLVLEMRDINGDGVLDKQELMADL------TQIN--------------------- 72
           ++ EAN +++  D NGDGVL K+EL + L      TQ+N                     
Sbjct: 10  AKNEANELIKKYDRNGDGVLTKEELQSFLRDARGSTQLNNIRNVSSSTVPKTNENLAQKV 69

Query: 73  -VKPCTT--------------LPNMHLTREEIREIFTGFXXXXXXXXXXXXXTQAFGMVG 132
               C T                N+ L+RE+I+EIF                T+AF  +G
Sbjct: 70  SSNTCITPKKQLLDKAQGSSKQSNVPLSREQIKEIFKYHDSNKDGFLSIRELTKAFSSMG 129

BLAST of Bhi04G000309 vs. TrEMBL
Match: tr|A0A0A0LRC1|A0A0A0LRC1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G358870 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 3.0e-10
Identity = 34/78 (43.59%), Postives = 46/78 (58.97%), Query Frame = 0

Query: 55  MHLTREEIREIFTGFXXXXXXXXXXXXXTQAFGMVGSYAPLFKAHYAMVHADDDGDGLIS 114
           + L+RE+I+EIF                 +AFG  GS  P +KAHY M HAD++GDG I 
Sbjct: 8   LQLSREDIKEIFREHDIDGDGRLSMNEMVKAFGCFGSILPFYKAHYGMAHADENGDGFIE 67

Query: 115 ESELNKLIDYVEKTNRRR 133
           E EL+KL+DY +K   +R
Sbjct: 68  EEELDKLVDYAQKFQHKR 85

BLAST of Bhi04G000309 vs. NCBI nr
Match: XP_004152804.1 (PREDICTED: probable calcium-binding protein CML36 [Cucumis sativus] >KGN62517.1 hypothetical protein Csa_2G358880 [Cucumis sativus])

HSP 1 Score: 172.9 bits (437), Expect = 7.1e-40
Identity = 90/131 (68.70%), Postives = 102/131 (77.86%), Query Frame = 0

Query: 5   FLALQRPLSEKEANLVLEMRDINGDGVLDKQELMADLTQINVKPCTTLPNMHLTREEIRE 64
           F+ALQ+PLSEKEANL+LEMRD NGDGVLDKQELMADLT  N KP T+L +M LTREEI+E
Sbjct: 7   FVALQKPLSEKEANLLLEMRDANGDGVLDKQELMADLTHTNKKPSTSLQDMKLTREEIKE 66

Query: 65  IFTGFXXXXXXXXXXXXXTQAFGMVGSYAPLFKAHYAMVHADDDGDGLISESELNKLIDY 124
           IF GF              QAFGM+GS +P+ KAHYAM  AD+DGDG ISE ELNKLIDY
Sbjct: 67  IFVGFDIDGDGFLSKNEVIQAFGMMGSCSPIMKAHYAMACADEDGDGRISEPELNKLIDY 126

Query: 125 VEKT-NRRRLN 135
           V++T NRRRLN
Sbjct: 127 VQRTINRRRLN 137

BLAST of Bhi04G000309 vs. NCBI nr
Match: XP_008445562.1 (PREDICTED: probable calcium-binding protein CML36 [Cucumis melo])

HSP 1 Score: 161.8 bits (408), Expect = 1.6e-36
Identity = 98/131 (74.81%), Postives = 106/131 (80.92%), Query Frame = 0

Query: 5   FLALQRPLSEKEANLVLEMRDINGDGVLDKQELMADLTQINVKPCTTLPNMHLTREEIRE 64
           FLALQ+PLSEKEANLV +MRD NGDG+LDKQELM DLT  N KP T LPNM LTRE    
Sbjct: 7   FLALQKPLSEKEANLVFKMRDANGDGILDKQELMTDLTHANKKPSTNLPNMKLTREXXXX 66

Query: 65  IFTGFXXXXXXXXXXXXXTQAFGMVGSYAPLFKAHYAMVHADDDGDGLISESELNKLIDY 124
                XXXXXXXXXXXXX QAFGM+GSY+PL K HYAM  AD+DGDGLISE ELNKLIDY
Sbjct: 67  XXXXXXXXXXXXXXXXXXXQAFGMMGSYSPLLKTHYAMACADEDGDGLISECELNKLIDY 126

Query: 125 VEKT-NRRRLN 135
           V++T NRRRLN
Sbjct: 127 VQRTNNRRRLN 137

BLAST of Bhi04G000309 vs. NCBI nr
Match: XP_022951880.1 (calmodulin-like [Cucurbita moschata])

HSP 1 Score: 88.2 bits (217), Expect = 2.3e-14
Identity = 53/140 (37.86%), Postives = 73/140 (52.14%), Query Frame = 0

Query: 12  LSEKEANLVLEMRDINGDGVLDKQELMA--------------DLTQINVKPCTTLP---- 71
           +SE +AN +++  D NGD +L K EL A              D+     K    +P    
Sbjct: 15  MSEADANNLIKKYDKNGDSILTKDELTAMILEQASQQQGPPKDIVCKPKKKPAKVPEDKG 74

Query: 72  -NMHLTREEIREIFTGFXXXXXXXXXXXXXTQAFGMVGSYAPLFKAHYAMVHADDDGDGL 131
            +M L+R EIR+IF                T+AF  +GS  PL+KAHY + +AD DGDG 
Sbjct: 75  LHMRLSRSEIRDIFLEHDIDGDGYLNVSELTKAFSFIGSMLPLYKAHYGLNYADADGDGR 134

Query: 132 ISESELNKLIDYVEKTNRRR 133
           ISE EL KL+DY E+ +RR+
Sbjct: 135 ISEEELEKLVDYAERVSRRK 154

BLAST of Bhi04G000309 vs. NCBI nr
Match: XP_023537874.1 (probable calcium-binding protein CML11 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 88.2 bits (217), Expect = 2.3e-14
Identity = 53/140 (37.86%), Postives = 73/140 (52.14%), Query Frame = 0

Query: 12  LSEKEANLVLEMRDINGDGVLDKQELMA--------------DLTQINVKPCTTLP---- 71
           +SE +AN +++  D NGD +L K EL A              D+     K    +P    
Sbjct: 1   MSEADANNLIKKYDKNGDSILTKDELTAMILEQASQQQGPPKDIVCKPKKKPAKVPEDKG 60

Query: 72  -NMHLTREEIREIFTGFXXXXXXXXXXXXXTQAFGMVGSYAPLFKAHYAMVHADDDGDGL 131
            +M L+R EIR+IF                T+AF  +GS  PL+KAHY + +AD DGDG 
Sbjct: 61  LHMRLSRSEIRDIFLEHDIDGDGYLNVSELTKAFSFIGSMLPLYKAHYGLNYADADGDGR 120

Query: 132 ISESELNKLIDYVEKTNRRR 133
           ISE EL KL+DY E+ +RR+
Sbjct: 121 ISEEELGKLVDYAERVSRRK 140

BLAST of Bhi04G000309 vs. NCBI nr
Match: XP_023002889.1 (calmodulin-A-like [Cucurbita maxima])

HSP 1 Score: 87.8 bits (216), Expect = 3.0e-14
Identity = 53/140 (37.86%), Postives = 72/140 (51.43%), Query Frame = 0

Query: 12  LSEKEANLVLEMRDINGDGVLDKQEL------MADLTQINVKPCTTLP------------ 71
           +SE +AN +++  D NGD +L K EL       A   Q + K     P            
Sbjct: 15  MSEADANNLIKKYDKNGDSILTKDELTAMILEQASQQQGHPKDVVCKPKKNPAKVPEDKG 74

Query: 72  -NMHLTREEIREIFTGFXXXXXXXXXXXXXTQAFGMVGSYAPLFKAHYAMVHADDDGDGL 131
            +M L+R EIR+IF                T+AF  +GS  PL+KAHY + +AD DGDG 
Sbjct: 75  LHMRLSRSEIRDIFLEHDIDGDGYLNVSELTKAFSFIGSMLPLYKAHYGLNYADADGDGR 134

Query: 132 ISESELNKLIDYVEKTNRRR 133
           ISE EL KL+DY E+ +RR+
Sbjct: 135 ISEEELGKLVDYAERVSRRK 154

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LP46|A0A0A0LP46_CUCSA4.7e-4068.70Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G358880 PE=4 SV=1[more]
tr|A0A1S3BD12|A0A1S3BD12_CUCME1.1e-3674.81probable calcium-binding protein CML36 OS=Cucumis melo OX=3656 GN=LOC103488542 P... [more]
tr|A0A1S3BDW2|A0A1S3BDW2_CUCME2.7e-1134.84probable calcium-binding protein CML11 OS=Cucumis melo OX=3656 GN=LOC103488544 P... [more]
tr|A0A0A0LRC8|A0A0A0LRC8_CUCSA1.8e-1033.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359950 PE=4 SV=1[more]
tr|A0A0A0LRC1|A0A0A0LRC1_CUCSA3.0e-1043.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G358870 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_004152804.17.1e-4068.70PREDICTED: probable calcium-binding protein CML36 [Cucumis sativus] >KGN62517.1 ... [more]
XP_008445562.11.6e-3674.81PREDICTED: probable calcium-binding protein CML36 [Cucumis melo][more]
XP_022951880.12.3e-1437.86calmodulin-like [Cucurbita moschata][more]
XP_023537874.12.3e-1437.86probable calcium-binding protein CML11 [Cucurbita pepo subsp. pepo][more]
XP_023002889.13.0e-1437.86calmodulin-A-like [Cucurbita maxima][more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi04M000309Bhi04M000309mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 16..44
e-value: 1.8
score: 15.7
coord: 97..125
e-value: 22.0
score: 7.0
coord: 61..89
e-value: 5.0E-4
score: 29.4
IPR002048EF-hand domainPFAMPF13202EF-hand_5coord: 105..121
e-value: 0.012
score: 15.0
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 25..86
e-value: 1.0E-8
score: 35.4
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 12..47
score: 9.52
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 93..128
score: 8.07
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 57..92
score: 13.258
IPR002048EF-hand domainCDDcd00051EFhcoord: 61..122
e-value: 1.41593E-8
score: 46.7721
IPR002048EF-hand domainCDDcd00051EFhcoord: 25..86
e-value: 9.3089E-8
score: 44.0757
NoneNo IPR availableGENE3DG3DSA:1.10.238.10coord: 3..124
e-value: 1.6E-17
score: 65.6
NoneNo IPR availablePANTHERPTHR44455FAMILY NOT NAMEDcoord: 50..128
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 25..37
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 106..118
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 70..82
IPR011992EF-hand domain pairSUPERFAMILYSSF47473EF-handcoord: 7..122

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi04G000309Wax gourdwgowgoB096
Bhi04G000309Cucumber (Gy14) v1cgywgoB452
Bhi04G000309Cucumber (Gy14) v1cgywgoB458
Bhi04G000309Cucumber (Gy14) v2cgybwgoB157
Bhi04G000309Cucumber (Gy14) v2cgybwgoB368
Bhi04G000309Cucumber (Gy14) v2cgybwgoB649
Bhi04G000309Cucurbita maxima (Rimu)cmawgoB0014
Bhi04G000309Cucurbita maxima (Rimu)cmawgoB0129
Bhi04G000309Cucurbita maxima (Rimu)cmawgoB0194
Bhi04G000309Cucurbita maxima (Rimu)cmawgoB0576
Bhi04G000309Cucurbita maxima (Rimu)cmawgoB0664
Bhi04G000309Cucurbita maxima (Rimu)cmawgoB0943
Bhi04G000309Cucurbita moschata (Rifu)cmowgoB0005
Bhi04G000309Cucurbita moschata (Rifu)cmowgoB0124
Bhi04G000309Cucurbita moschata (Rifu)cmowgoB0190
Bhi04G000309Cucurbita moschata (Rifu)cmowgoB0570
Bhi04G000309Cucurbita moschata (Rifu)cmowgoB0944
Bhi04G000309Cucurbita pepo (Zucchini)cpewgoB0141
Bhi04G000309Cucurbita pepo (Zucchini)cpewgoB0335
Bhi04G000309Cucurbita pepo (Zucchini)cpewgoB0684
Bhi04G000309Cucurbita pepo (Zucchini)cpewgoB0860
Bhi04G000309Cucurbita pepo (Zucchini)cpewgoB0976
Bhi04G000309Cucurbita pepo (Zucchini)cpewgoB1028
Bhi04G000309Wild cucumber (PI 183967)cpiwgoB159
Bhi04G000309Wild cucumber (PI 183967)cpiwgoB388
Bhi04G000309Wild cucumber (PI 183967)cpiwgoB689
Bhi04G000309Cucumber (Chinese Long) v3cucwgoB169
Bhi04G000309Cucumber (Chinese Long) v3cucwgoB390
Bhi04G000309Cucumber (Chinese Long) v3cucwgoB702
Bhi04G000309Cucumber (Chinese Long) v2cuwgoB162
Bhi04G000309Cucumber (Chinese Long) v2cuwgoB385
Bhi04G000309Cucumber (Chinese Long) v2cuwgoB678
Bhi04G000309Bottle gourd (USVL1VR-Ls)lsiwgoB323
Bhi04G000309Bottle gourd (USVL1VR-Ls)lsiwgoB363
Bhi04G000309Bottle gourd (USVL1VR-Ls)lsiwgoB591
Bhi04G000309Melon (DHL92) v3.6.1medwgoB228
Bhi04G000309Melon (DHL92) v3.6.1medwgoB321
Bhi04G000309Melon (DHL92) v3.6.1medwgoB594
Bhi04G000309Melon (DHL92) v3.5.1mewgoB228
Bhi04G000309Melon (DHL92) v3.5.1mewgoB322
Bhi04G000309Melon (DHL92) v3.5.1mewgoB588
Bhi04G000309Watermelon (Charleston Gray)wcgwgoB452
Bhi04G000309Watermelon (Charleston Gray)wcgwgoB612
Bhi04G000309Watermelon (97103) v2wgowmbB301
Bhi04G000309Watermelon (97103) v2wgowmbB313
Bhi04G000309Watermelon (97103) v1wgowmB297
Bhi04G000309Watermelon (97103) v1wgowmB329
Bhi04G000309Silver-seed gourdcarwgoB0117
Bhi04G000309Silver-seed gourdcarwgoB0231
Bhi04G000309Silver-seed gourdcarwgoB0902