Bhi04G000221 (gene) Wax gourd

Overview
NameBhi04G000221
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionB3 domain-containing protein At3g25182-like
Locationchr4 : 6011407 .. 6011619 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAGGCAAAAAGAAATAGTGTTTTCGAAGACGATTGAGATGTCGACGGCGTTGCAAGAGCGAATTGCTGAATTGGGTGGCTTCGACATCCAAATGTTGACTCAAAAGAAATTGCAAGACACTGATATGAATAAGAACCATGGTCGATTATTGATTCCATTCGGAAAACTCATGAATGACTTTGCTACAGAAATGAGAAAAAGATGTTAA

mRNA sequence

ATGAAGAGGCAAAAAGAAATAGTGTTTTCGAAGACGATTGAGATGTCGACGGCGTTGCAAGAGCGAATTGCTGAATTGGGTGGCTTCGACATCCAAATGTTGACTCAAAAGAAATTGCAAGACACTGATATGAATAAGAACCATGGTCGATTATTGATTCCATTCGGAAAACTCATGAATGACTTTGCTACAGAAATGAGAAAAAGATGTTAA

Coding sequence (CDS)

ATGAAGAGGCAAAAAGAAATAGTGTTTTCGAAGACGATTGAGATGTCGACGGCGTTGCAAGAGCGAATTGCTGAATTGGGTGGCTTCGACATCCAAATGTTGACTCAAAAGAAATTGCAAGACACTGATATGAATAAGAACCATGGTCGATTATTGATTCCATTCGGAAAACTCATGAATGACTTTGCTACAGAAATGAGAAAAAGATGTTAA

Protein sequence

MKRQKEIVFSKTIEMSTALQERIAELGGFDIQMLTQKKLQDTDMNKNHGRLLIPFGKLMNDFATEMRKRC
Homology
[Close]
BLAST of Bhi04G000221 vs. TrEMBL
Match: tr|A0A0A0LL20|A0A0A0LL20_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361650 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.0e-17
Identity = 47/63 (74.60%), Postives = 54/63 (85.71%), Query Frame = 0 

Query: 7   IVFSKTIEMSTALQERIAELGGFDIQMLTQKKLQDTDMNKNHGRLLIPFGKLMNDFATEM 66
           +VFSKTIEM   L++RI ELGGF+IQ  TQK+LQDTDMNKNHGRLLIPF KL+NDFA+E 
Sbjct: 90  VVFSKTIEMPQMLRDRIEELGGFNIQFATQKRLQDTDMNKNHGRLLIPFKKLVNDFASEE 149

Query: 67  RKR 70
            KR
Sbjct: 150 EKR 152

[Close]
BLAST of Bhi04G000221 vs. TrEMBL
Match: tr|A0A1S3BCJ5|A0A1S3BCJ5_CUCME (B3 domain-containing protein At3g25182-like OS=Cucumis melo OX=3656 GN=LOC103488545 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.7e-17
Identity = 47/64 (73.44%), Postives = 55/64 (85.94%), Query Frame = 0 

Query: 6   EIVFSKTIEMSTALQERIAELGGFDIQMLTQKKLQDTDMNKNHGRLLIPFGKLMNDFATE 65
           ++VFSKTIEMS  L++RI EL GFDIQ +TQK+LQDTDMNKNHGRLLIPF KL NDFA+E
Sbjct: 84  DMVFSKTIEMSAMLRDRIDELDGFDIQYVTQKRLQDTDMNKNHGRLLIPFKKLRNDFASE 143

Query: 66  MRKR 70
             K+
Sbjct: 144 EEKQ 147

[Close]
BLAST of Bhi04G000221 vs. TrEMBL
Match: tr|A0A1S3CSS4|A0A1S3CSS4_CUCME (putative B3 domain-containing protein At3g24850 OS=Cucumis melo OX=3656 GN=LOC103504467 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.7e-07
Identity = 29/64 (45.31%), Postives = 44/64 (68.75%), Query Frame = 0 

Query: 2   KRQKEIVFSKTIEMSTALQERIAELGGFDIQMLTQKKLQDTDMNKNHGRLLIPFGKLMND 61
           K+ ++  +    EM T +++RI E+GG++I ++ QK+L DTD+NKN GRL +P  KL  D
Sbjct: 92  KKVEQSEYPSIPEMPTTMRDRIEEMGGYEINLVIQKQLTDTDLNKNEGRLSMPKKKLAFD 151

Query: 62  FATE 66
           F TE
Sbjct: 152 FTTE 155

[Close]
BLAST of Bhi04G000221 vs. TrEMBL
Match: tr|A0A0A0KUX9|A0A0A0KUX9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G570410 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-06
Identity = 29/64 (45.31%), Postives = 45/64 (70.31%), Query Frame = 0 

Query: 2   KRQKEIVFSKTIEMSTALQERIAELGGFDIQMLTQKKLQDTDMNKNHGRLLIPFGKLMND 61
           +R+  +  S+   M  A+++RI E+GG++I ++ QK+L DTD+NKNHGRL +   +L  D
Sbjct: 95  QRKMNVDQSERPSMPVAMRDRILEMGGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFD 154

Query: 62  FATE 66
           FATE
Sbjct: 155 FATE 158

[Close]
BLAST of Bhi04G000221 vs. TrEMBL
Match: tr|A0A1S4E600|A0A1S4E600_CUCME (putative B3 domain-containing protein At3g24850 OS=Cucumis melo OX=3656 GN=LOC103504562 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.8e-06
Identity = 27/51 (52.94%), Postives = 40/51 (78.43%), Query Frame = 0 

Query: 15  MSTALQERIAELGGFDIQMLTQKKLQDTDMNKNHGRLLIPFGKLMNDFATE 66
           M  A+++RI E+GG++I+++ QK+L DTD+NKNHGRL +   +L  DFATE
Sbjct: 127 MPVAMRDRILEMGGYEIRLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATE 177

[Close]
BLAST of Bhi04G000221 vs. NCBI nr
Match: KGN62600.1 (hypothetical protein Csa_2G361650 [Cucumis sativus])

HSP 1 Score: 97.8 bits (242), Expect = 1.5e-17
Identity = 47/63 (74.60%), Postives = 54/63 (85.71%), Query Frame = 0 

Query: 7   IVFSKTIEMSTALQERIAELGGFDIQMLTQKKLQDTDMNKNHGRLLIPFGKLMNDFATEM 66
           +VFSKTIEM   L++RI ELGGF+IQ  TQK+LQDTDMNKNHGRLLIPF KL+NDFA+E 
Sbjct: 90  VVFSKTIEMPQMLRDRIEELGGFNIQFATQKRLQDTDMNKNHGRLLIPFKKLVNDFASEE 149

Query: 67  RKR 70
            KR
Sbjct: 150 EKR 152

[Close]
BLAST of Bhi04G000221 vs. NCBI nr
Match: XP_004152777.2 (PREDICTED: putative B3 domain-containing protein At2g27410 [Cucumis sativus])

HSP 1 Score: 97.8 bits (242), Expect = 1.5e-17
Identity = 47/63 (74.60%), Postives = 54/63 (85.71%), Query Frame = 0 

Query: 7   IVFSKTIEMSTALQERIAELGGFDIQMLTQKKLQDTDMNKNHGRLLIPFGKLMNDFATEM 66
           +VFSKTIEM   L++RI ELGGF+IQ  TQK+LQDTDMNKNHGRLLIPF KL+NDFA+E 
Sbjct: 90  VVFSKTIEMPQMLRDRIEELGGFNIQFATQKRLQDTDMNKNHGRLLIPFKKLVNDFASEE 149

Query: 67  RKR 70
            KR
Sbjct: 150 EKR 152

[Close]
BLAST of Bhi04G000221 vs. NCBI nr
Match: XP_008445565.1 (PREDICTED: B3 domain-containing protein At3g25182-like [Cucumis melo])

HSP 1 Score: 97.1 bits (240), Expect = 2.6e-17
Identity = 47/64 (73.44%), Postives = 55/64 (85.94%), Query Frame = 0 

Query: 6   EIVFSKTIEMSTALQERIAELGGFDIQMLTQKKLQDTDMNKNHGRLLIPFGKLMNDFATE 65
           ++VFSKTIEMS  L++RI EL GFDIQ +TQK+LQDTDMNKNHGRLLIPF KL NDFA+E
Sbjct: 84  DMVFSKTIEMSAMLRDRIDELDGFDIQYVTQKRLQDTDMNKNHGRLLIPFKKLRNDFASE 143

Query: 66  MRKR 70
             K+
Sbjct: 144 EEKQ 147

[Close]
BLAST of Bhi04G000221 vs. NCBI nr
Match: XP_022144152.1 (B3 domain-containing protein At2g31420-like [Momordica charantia])

HSP 1 Score: 93.2 bits (230), Expect = 3.8e-16
Identity = 43/67 (64.18%), Postives = 55/67 (82.09%), Query Frame = 0 

Query: 3   RQKEIVFSKTIEMSTALQERIAELGGFDIQMLTQKKLQDTDMNKNHGRLLIPFGKLMNDF 62
           +Q E+VFS TIEM   L++RIAELGG+DIQ++ QK+LQDTD+N+NHGRL IP  KL+NDF
Sbjct: 40  KQLEVVFSSTIEMPAXLRDRIAELGGYDIQIVIQKRLQDTDLNRNHGRLSIPIKKLLNDF 99

Query: 63  ATEMRKR 70
            TE  K+
Sbjct: 100 TTEEEKQ 106

[Close]
BLAST of Bhi04G000221 vs. NCBI nr
Match: XP_022144153.1 (uncharacterized protein LOC111013910 [Momordica charantia])

HSP 1 Score: 92.8 bits (229), Expect = 4.9e-16
Identity = 43/67 (64.18%), Postives = 54/67 (80.60%), Query Frame = 0 

Query: 3   RQKEIVFSKTIEMSTALQERIAELGGFDIQMLTQKKLQDTDMNKNHGRLLIPFGKLMNDF 62
           +  E+VFS TIEM   L++RIAELGG+DIQ + QK+LQDTD+N+NHGRL IP  KL+NDF
Sbjct: 37  KXSEVVFSSTIEMPALLRDRIAELGGYDIQXVIQKRLQDTDLNRNHGRLSIPIKKLLNDF 96

Query: 63  ATEMRKR 70
           ATE  K+
Sbjct: 97  ATEEEKK 103

The following BLAST results are available for this feature:
BLAST of Bhi04G000221 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi04G000221 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi04G000221 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LL20|A0A0A0LL20_CUCSA1.0e-1774.60Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361650 PE=4 SV=1[more]
tr|A0A1S3BCJ5|A0A1S3BCJ5_CUCME1.7e-1773.44B3 domain-containing protein At3g25182-like OS=Cucumis melo OX=3656 GN=LOC103488... [more]
tr|A0A1S3CSS4|A0A1S3CSS4_CUCME4.7e-0745.31putative B3 domain-containing protein At3g24850 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A0A0KUX9|A0A0A0KUX9_CUCSA1.4e-0645.31Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G570410 PE=4 SV=1[more]
tr|A0A1S4E600|A0A1S4E600_CUCME1.8e-0652.94putative B3 domain-containing protein At3g24850 OS=Cucumis melo OX=3656 GN=LOC10... [more]
BLAST of Bhi04G000221 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN62600.11.5e-1774.60hypothetical protein Csa_2G361650 [Cucumis sativus][more]
XP_004152777.21.5e-1774.60PREDICTED: putative B3 domain-containing protein At2g27410 [Cucumis sativus][more]
XP_008445565.12.6e-1773.44PREDICTED: B3 domain-containing protein At3g25182-like [Cucumis melo][more]
XP_022144152.13.8e-1664.18B3 domain-containing protein At2g31420-like [Momordica charantia][more]
XP_022144153.14.9e-1664.18uncharacterized protein LOC111013910 [Momordica charantia][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi04M000221Bhi04M000221mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Bhi04G000221Csa2G361650Cucumber (Chinese Long) v2cuwgoB162
Bhi04G000221Lsi08G013940Bottle gourd (USVL1VR-Ls)lsiwgoB591
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi04G000221Cucurbita maxima (Rimu)cmawgoB0943
Bhi04G000221Cucurbita moschata (Rifu)cmowgoB0944
Bhi04G000221Cucurbita pepo (Zucchini)cpewgoB0141
Bhi04G000221Bottle gourd (USVL1VR-Ls)lsiwgoB123
Bhi04G000221Watermelon (Charleston Gray)wcgwgoB282
Bhi04G000221Watermelon (97103) v2wgowmbB298
Bhi04G000221Watermelon (97103) v1wgowmB343
Bhi04G000221Silver-seed gourdcarwgoB1093