Bhi03G002039 (gene) Wax gourd

Overview
NameBhi03G002039
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionGlutamate receptor
Locationchr3 : 59418395 .. 59418739 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGAGTACTTTGCTATGATGAAACGTTTTGCTAATGGTCTTGCCCTTACAGGTTCCCCCGTCTCCTCCTCTGATCTGACTTCACAAGTGCTAGCTAGTCTTGATGAAGAGTATAACGCAGTTGTAGTAGTAATCCAAAGCAAAGGAACAACACGTTGGTCTGATCTGCAATCTGACCTGCTGTCATATGAGAAAAAGCTTGAGTATCAACTTACTGTCAAGATAGGAATTACCGAAATAGCTAATGTCTCACTCTCACCTAGCCCACCCTCAGCCAACATTGTGCATAATCAGTTCAATCCTTCAGCACACACCCCTCGAAACTCTTCTGGATATACATAA

mRNA sequence

ATGAGTGAGTACTTTGCTATGATGAAACGTTTTGCTAATGGTCTTGCCCTTACAGGTTCCCCCGTCTCCTCCTCTGATCTGACTTCACAAGTGCTAGCTAGTCTTGATGAAGAGTATAACGCAGTTGTAGTAGTAATCCAAAGCAAAGGAACAACACGTTGGTCTGATCTGCAATCTGACCTGCTGTCATATGAGAAAAAGCTTGAGTATCAACTTACTGTCAAGATAGGAATTACCGAAATAGCTAATGTCTCACTCTCACCTAGCCCACCCTCAGCCAACATTGTGCATAATCAGTTCAATCCTTCAGCACACACCCCTCGAAACTCTTCTGGATATACATAA

Coding sequence (CDS)

ATGAGTGAGTACTTTGCTATGATGAAACGTTTTGCTAATGGTCTTGCCCTTACAGGTTCCCCCGTCTCCTCCTCTGATCTGACTTCACAAGTGCTAGCTAGTCTTGATGAAGAGTATAACGCAGTTGTAGTAGTAATCCAAAGCAAAGGAACAACACGTTGGTCTGATCTGCAATCTGACCTGCTGTCATATGAGAAAAAGCTTGAGTATCAACTTACTGTCAAGATAGGAATTACCGAAATAGCTAATGTCTCACTCTCACCTAGCCCACCCTCAGCCAACATTGTGCATAATCAGTTCAATCCTTCAGCACACACCCCTCGAAACTCTTCTGGATATACATAA

Protein sequence

MSEYFAMMKRFANGLALTGSPVSSSDLTSQVLASLDEEYNAVVVVIQSKGTTRWSDLQSDLLSYEKKLEYQLTVKIGITEIANVSLSPSPPSANIVHNQFNPSAHTPRNSSGYT
Homology
[Close]
BLAST of Bhi03G002039 vs. TrEMBL
Match: tr|A0A151RKJ3|A0A151RKJ3_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_035512 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 6.7e-11
Identity = 40/89 (44.94%), Postives = 55/89 (61.80%), Query Frame = 0 

Query: 1   MSEYFAMMKRFANGLALTGSPVSSSDLTSQVLASLDEEYNAVVVVIQSKGTTRWSDLQSD 60
           M EYF  MK  A+ LAL GS VS+ DL +Q LA LD EYN +VV +  K    W ++Q+ 
Sbjct: 140 MEEYFTKMKEIADDLALAGSSVSTMDLVTQTLAGLDNEYNPIVVQLSDKEHLTWVEMQAQ 199

Query: 61  LLSYEKKLEYQLTVKIGITEIANVSLSPS 90
           LL+YE +LE        I  ++N++L+PS
Sbjct: 200 LLTYENRLEQ-------INNLSNLTLNPS 221

[Close]
BLAST of Bhi03G002039 vs. TrEMBL
Match: tr|A0A2K3MLQ3|A0A2K3MLQ3_TRIPR (Glutamate receptor OS=Trifolium pratense OX=57577 GN=L195_g047885 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 8.7e-11
Identity = 40/106 (37.74%), Postives = 65/106 (61.32%), Query Frame = 0 

Query: 1   MSEYFAMMKRFANGLALTGSPVSSSDLTSQVLASLDEEYNAVVVVIQSKGTTRWSDLQSD 60
           M EY   MK  ++ L L GSP+S++DL  Q L+ LD EYNA+VV + +K    W D+Q++
Sbjct: 136 MEEYLIKMKNLSDNLKLAGSPISTTDLIIQTLSGLDSEYNAIVVQLSNKLELTWIDMQAE 195

Query: 61  LLSYEKKLEYQLTVKIGITEIANVSLSPSPPSANIVHNQFNPSAHT 107
           LL++E ++E+       +  ++N++L+PS   A    N+ N S +T
Sbjct: 196 LLAFENRIEF-------LNNLSNLTLNPSANVAARYENKGNRSFNT 234

[Close]
BLAST of Bhi03G002039 vs. TrEMBL
Match: tr|A0A151S6M8|A0A151S6M8_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=3821 GN=KK1_027809 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.5e-10
Identity = 41/99 (41.41%), Postives = 59/99 (59.60%), Query Frame = 0 

Query: 1   MSEYFAMMKRFANGLALTGSPVSSSDLTSQVLASLDEEYNAVVVVIQSKGTTRWSDLQSD 60
           M EY   MK  A+ LAL GS VS+ DL +Q LA LD EYN +VV +  K    W ++Q+ 
Sbjct: 51  MEEYLTKMKEIADDLALAGSSVSTMDLVTQTLAGLDNEYNPIVVQLSDKEHLTWVEMQAQ 110

Query: 61  LLSYEKKLEYQLTVKIGITEIANVSLSPSPPSANIVHNQ 100
           LL+YE +LE        I   +N++L+PS   + I++N+
Sbjct: 111 LLTYENRLEQ-------INNQSNLTLNPSSNISTILYNR 142

[Close]
BLAST of Bhi03G002039 vs. TrEMBL
Match: tr|A0A151U7R7|A0A151U7R7_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_008029 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.9e-10
Identity = 37/90 (41.11%), Postives = 56/90 (62.22%), Query Frame = 0 

Query: 1   MSEYFAMMKRFANGLALTGSPVSSSDLTSQVLASLDEEYNAVVVVIQSKGTTRWSDLQSD 60
           M EY   MK  A+ L L GSP+S++DL +Q LA LD  YNA++V +  K    W D+Q+ 
Sbjct: 51  MEEYLIKMKLLADSLKLAGSPISNTDLITQTLAGLDINYNAIIVQLSDKNDLTWIDMQAQ 110

Query: 61  LLSYEKKLEYQLTVKIGITEIANVSLSPSP 91
           LL++E +LE        +  +++++LSPSP
Sbjct: 111 LLTFENRLEQ-------LNSLSSLTLSPSP 133

[Close]
BLAST of Bhi03G002039 vs. TrEMBL
Match: tr|A0A151RJ85|A0A151RJ85_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=3821 GN=KK1_035989 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.3e-10
Identity = 37/89 (41.57%), Postives = 56/89 (62.92%), Query Frame = 0 

Query: 1  MSEYFAMMKRFANGLALTGSPVSSSDLTSQVLASLDEEYNAVVVVIQSKGTTRWSDLQSD 60
          M EY   MK  A+ L L GSP+S+++L +Q LA LD +YNA+VV +  K    W D+Q+ 
Sbjct: 3  MEEYLIKMKLLADSLKLVGSPISNTNLITQTLAGLDFDYNAIVVQLSDKNDLTWIDMQAQ 62

Query: 61 LLSYEKKLEYQLTVKIGITEIANVSLSPS 90
          LL++E +LE        +  ++N++LSPS
Sbjct: 63 LLAFENRLEQ-------LNSLSNLTLSPS 84

[Close]
BLAST of Bhi03G002039 vs. NCBI nr
Match: XP_022151683.1 (uncharacterized protein LOC111019598 [Momordica charantia])

HSP 1 Score: 86.7 bits (213), Expect = 5.7e-14
Identity = 43/78 (55.13%), Postives = 55/78 (70.51%), Query Frame = 0 

Query: 1   MSEYFAMMKRFANGLALTGSPVSSSDLTSQVLASLDEEYNAVVVVIQSKGTTRWSDLQSD 60
           M EY  +MK  A+ LAL GS VS  DL SQVL  LDEEYN +VV +Q K    WS++ ++
Sbjct: 168 MIEYLKLMKSHADNLALAGSSVSVRDLVSQVLTGLDEEYNPIVVAVQGKVNLSWSEMHAE 227

Query: 61  LLSYEKKLEYQLTVKIGI 79
           LL+YEK+LEYQ ++K GI
Sbjct: 228 LLTYEKRLEYQNSLKSGI 245

[Close]
BLAST of Bhi03G002039 vs. NCBI nr
Match: KYP43069.1 (hypothetical protein KK1_035512 [Cajanus cajan])

HSP 1 Score: 75.9 bits (185), Expect = 1.0e-10
Identity = 40/89 (44.94%), Postives = 55/89 (61.80%), Query Frame = 0 

Query: 1   MSEYFAMMKRFANGLALTGSPVSSSDLTSQVLASLDEEYNAVVVVIQSKGTTRWSDLQSD 60
           M EYF  MK  A+ LAL GS VS+ DL +Q LA LD EYN +VV +  K    W ++Q+ 
Sbjct: 140 MEEYFTKMKEIADDLALAGSSVSTMDLVTQTLAGLDNEYNPIVVQLSDKEHLTWVEMQAQ 199

Query: 61  LLSYEKKLEYQLTVKIGITEIANVSLSPS 90
           LL+YE +LE        I  ++N++L+PS
Sbjct: 200 LLTYENRLEQ-------INNLSNLTLNPS 221

[Close]
BLAST of Bhi03G002039 vs. NCBI nr
Match: PNX91751.1 (glutamate receptor [Trifolium pratense])

HSP 1 Score: 75.5 bits (184), Expect = 1.3e-10
Identity = 40/106 (37.74%), Postives = 65/106 (61.32%), Query Frame = 0 

Query: 1   MSEYFAMMKRFANGLALTGSPVSSSDLTSQVLASLDEEYNAVVVVIQSKGTTRWSDLQSD 60
           M EY   MK  ++ L L GSP+S++DL  Q L+ LD EYNA+VV + +K    W D+Q++
Sbjct: 136 MEEYLIKMKNLSDNLKLAGSPISTTDLIIQTLSGLDSEYNAIVVQLSNKLELTWIDMQAE 195

Query: 61  LLSYEKKLEYQLTVKIGITEIANVSLSPSPPSANIVHNQFNPSAHT 107
           LL++E ++E+       +  ++N++L+PS   A    N+ N S +T
Sbjct: 196 LLAFENRIEF-------LNNLSNLTLNPSANVAARYENKGNRSFNT 234

[Close]
BLAST of Bhi03G002039 vs. NCBI nr
Match: KYP50444.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 74.7 bits (182), Expect = 2.3e-10
Identity = 41/99 (41.41%), Postives = 59/99 (59.60%), Query Frame = 0 

Query: 1   MSEYFAMMKRFANGLALTGSPVSSSDLTSQVLASLDEEYNAVVVVIQSKGTTRWSDLQSD 60
           M EY   MK  A+ LAL GS VS+ DL +Q LA LD EYN +VV +  K    W ++Q+ 
Sbjct: 51  MEEYLTKMKEIADDLALAGSSVSTMDLVTQTLAGLDNEYNPIVVQLSDKEHLTWVEMQAQ 110

Query: 61  LLSYEKKLEYQLTVKIGITEIANVSLSPSPPSANIVHNQ 100
           LL+YE +LE        I   +N++L+PS   + I++N+
Sbjct: 111 LLTYENRLEQ-------INNQSNLTLNPSSNISTILYNR 142

[Close]
BLAST of Bhi03G002039 vs. NCBI nr
Match: KYP75308.1 (hypothetical protein KK1_008029 [Cajanus cajan])

HSP 1 Score: 74.3 bits (181), Expect = 2.9e-10
Identity = 37/90 (41.11%), Postives = 56/90 (62.22%), Query Frame = 0 

Query: 1   MSEYFAMMKRFANGLALTGSPVSSSDLTSQVLASLDEEYNAVVVVIQSKGTTRWSDLQSD 60
           M EY   MK  A+ L L GSP+S++DL +Q LA LD  YNA++V +  K    W D+Q+ 
Sbjct: 51  MEEYLIKMKLLADSLKLAGSPISNTDLITQTLAGLDINYNAIIVQLSDKNDLTWIDMQAQ 110

Query: 61  LLSYEKKLEYQLTVKIGITEIANVSLSPSP 91
           LL++E +LE        +  +++++LSPSP
Sbjct: 111 LLTFENRLEQ-------LNSLSSLTLSPSP 133

The following BLAST results are available for this feature:
BLAST of Bhi03G002039 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi03G002039 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi03G002039 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A151RKJ3|A0A151RKJ3_CAJCA6.7e-1144.94Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_035512 PE=4 SV=1[more]
tr|A0A2K3MLQ3|A0A2K3MLQ3_TRIPR8.7e-1137.74Glutamate receptor OS=Trifolium pratense OX=57577 GN=L195_g047885 PE=4 SV=1[more]
tr|A0A151S6M8|A0A151S6M8_CAJCA1.5e-1041.41Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=... [more]
tr|A0A151U7R7|A0A151U7R7_CAJCA1.9e-1041.11Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_008029 PE=4 SV=1[more]
tr|A0A151RJ85|A0A151RJ85_CAJCA4.3e-1041.57Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=... [more]
BLAST of Bhi03G002039 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022151683.15.7e-1455.13uncharacterized protein LOC111019598 [Momordica charantia][more]
KYP43069.11.0e-1044.94hypothetical protein KK1_035512 [Cajanus cajan][more]
PNX91751.11.3e-1037.74glutamate receptor [Trifolium pratense][more]
KYP50444.12.3e-1041.41Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan][more]
KYP75308.12.9e-1041.11hypothetical protein KK1_008029 [Cajanus cajan][more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi03M002039Bhi03M002039mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 1..68
e-value: 3.2E-8
score: 33.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..114