Bhi03G001901 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi03G001901
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Mitogen-activated protein kinase kinase
Location	chr3 : 52460522 .. 52461031 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATATGAAATTCCCAAACCCTAACAACAGCAATGGAGTCGGAAGTCAAACGCAAATCAAGGGTTTCGACAACTCTCATGGTTCTTTTTGGTTTCGTGGTCGTCTTCTCGACAAAGGTAGCTTCGGCTCTGTTTTCTTAGCCCAAATTAACACAGACTTTTTTATCGATTCACATTATGGTAAACTTCCTCTTGGTAAATATATTGCTGTCAAATCTTCCTTCTTCAAAGATTCCCCCTCCCTTCGATTTGAGAAGAAGGTACTTGTTGCTTTCAAGTTTTGCTCTAATGTAGTTCAATGTTATGGACATGAAATTACAAAATCTGTATCTGGCAATTACATTATTGTTCTGGAGGTAGTTTGTATGATCGTATTACTAAATTCGGACCCAATGGCTTACCGGAATTGGAAGTTCGTCGATATACCAGAGACATTGTCTATGGAATTTATTCTATTCATGGCCTTGGATATATTCATTGCAATATTAAACCAGAAAATATACTTCTGA

mRNA sequence

ATGAATATGAAATTCCCAAACCCTAACAACAGCAATGGAGTCGGAAGTCAAACGCAAATCAAGGGTTTCGACAACTCTCATGGTTCTTTTTGGTTTCGTGGTCGTCTTCTCGACAAAGGTAGCTTCGGCTCTGTTTTCTTAGCCCAAATTAACACAGACTTTTTTATCGATTCACATTATGGTAAACTTCCTCTTGGTAAATATATTGCTGTCAAATCTTCCTTCTTCAAAGATTCCCCCTCCCTTCGATTTGAGAAGAAGGTACTTGTTGCTTTCAAGTTTTGCTCTAATGTAGTTCAATGTTATGGACATGAAATTACAAAATCTGTATCTGGCAATTACATTATTGTTCTGGAGGTAGTTTGTATGATCGTATTACTAAATTCGGACCCAATGGCTTACCGGAATTGGAAGTTCGTCGATATACCAGAGACATTGTCTATGGAATTTATTCTATTCATGGCCTTGGATATATTCATTGCAATATTAAACCAGAAAATATACTTCTGA

Coding sequence (CDS)

ATGAATATGAAATTCCCAAACCCTAACAACAGCAATGGAGTCGGAAGTCAAACGCAAATCAAGGGTTTCGACAACTCTCATGGTTCTTTTTGGTTTCGTGGTCGTCTTCTCGACAAAGGTAGCTTCGGCTCTGTTTTCTTAGCCCAAATTAACACAGACTTTTTTATCGATTCACATTATGGTAAACTTCCTCTTGGTAAATATATTGCTGTCAAATCTTCCTTCTTCAAAGATTCCCCCTCCCTTCGATTTGAGAAGAAGGTACTTGTTGCTTTCAAGTTTTGCTCTAATGTAGTTCAATGTTATGGACATGAAATTACAAAATCTGTATCTGGCAATTACATTATTGTTCTGGAGGTAGTTTGTATGATCGTATTACTAAATTCGGACCCAATGGCTTACCGGAATTGGAAGTTCGTCGATATACCAGAGACATTGTCTATGGAATTTATTCTATTCATGGCCTTGGATATATTCATTGCAATATTAAACCAGAAAATATACTTCTGA

Protein sequence

MNMKFPNPNNSNGVGSQTQIKGFDNSHGSFWFRGRLLDKGSFGSVFLAQINTDFFIDSHYGKLPLGKYIAVKSSFFKDSPSLRFEKKVLVAFKFCSNVVQCYGHEITKSVSGNYIIVLEVVCMIVLLNSDPMAYRNWKFVDIPETLSMEFILFMALDIFIAILNQKIYF

Homology

[Close]

BLAST of Bhi03G001901 vs. TAIR10
Match: AT2G41910.1 (Protein kinase superfamily protein)

HSP 1 Score: 45.8 bits (107), Expect = 3.0e-05
Identity = 31/89 (34.83%), Postives = 48/89 (53.93%), Query Frame = 0


Query: 35  RLLDKGSFGSVFLAQINTDFFIDSHYGKLPLGKYIAVKSSFFKDSPSLRFEKKVLVAFKF 94
           + L KGS+GSV L +          Y K     Y AV +  +K++ SL  E  +L  FK 
Sbjct: 10  KYLGKGSYGSVSLFK----------YSKPRTTLYTAVMTCNYKNAESLEKEFGILSEFKG 69

Query: 95  CSNVVQCYGHEITKS--VSGN--YIIVLE 120
           CS +VQCY + + ++  V GN  Y++++E
Sbjct: 70  CSRIVQCYENRVIENLDVEGNKEYMMLME 88

[Close]

BLAST of Bhi03G001901 vs. TAIR10
Match: AT2G05060.1 (Protein kinase superfamily protein)

HSP 1 Score: 43.1 bits (100), Expect = 2.0e-04
Identity = 27/77 (35.06%), Postives = 43/77 (55.84%), Query Frame = 0


Query: 35  RLLDKGSFGSVFLAQINTDFFIDSHYGKLPLGKYIAVKSSFFKDSPSLRFEKKVLVAFKF 94
           ++L KGS GSV L +  +   +D          Y AVK+S    + SL  E ++L  FK 
Sbjct: 18  KVLGKGSSGSVSLIKYKSR--LDGQ------TLYAAVKTSNIIHADSLLKEFQILSEFKG 77

Query: 95  CSNVVQCYGHEITKSVS 112
           CS +VQCYG ++ ++++
Sbjct: 78  CSRIVQCYGTKVQETIN 86

[Close]

BLAST of Bhi03G001901 vs. TAIR10
Match: AT2G34290.1 (Protein kinase superfamily protein)

HSP 1 Score: 42.7 bits (99), Expect = 2.6e-04
Identity = 28/77 (36.36%), Postives = 41/77 (53.25%), Query Frame = 0


Query: 35  RLLDKGSFGSVFLAQINTDFFIDSHYGKLPLGKYIAVKSSFFKDSPSLRFEKKVLVAFKF 94
           R L +GSFGSV L        +++         Y AVK+S   D+ SL  E ++L  FK 
Sbjct: 5   RYLGEGSFGSVSLFSYKRRCDVET--------LYAAVKTS--DDAKSLYEEFQILSKFKG 64

Query: 95  CSNVVQCYGHEITKSVS 112
           CS +VQCYG  + + ++
Sbjct: 65  CSRIVQCYGSGVEQRLN 71

[Close]

BLAST of Bhi03G001901 vs. TrEMBL
Match: tr|A0A1Q3D664|A0A1Q3D664_CEPFO (Pkinase domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_31366 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.6e-08
Identity = 42/98 (42.86%), Postives = 59/98 (60.20%), Query Frame = 0


Query: 24  DNSHGSFWFRGRLLDKGSFGSVFLAQINTDFFIDSHYGKLPLGKYIAVKSSFFKDSPSLR 83
           +NSHG+ W RGRLL +G FGSVFL +       +  + +LP    +AVKS+    + +L+
Sbjct: 21  NNSHGASWVRGRLLGQGGFGSVFLGKSRKP---NEDHNQLP--ALMAVKSADMDQAHTLK 80

Query: 84  FEKKVLVAFKFCSNVVQCYGHEITKSVSGN--YIIVLE 120
            EK+VL   K    VV+CYG E+T+S  G   Y I+LE
Sbjct: 81  HEKQVLSTLKNSPFVVKCYGDEVTESGDGKVIYNILLE 113

[Close]

BLAST of Bhi03G001901 vs. TrEMBL
Match: tr|A0A2U1K902|A0A2U1K902_ARTAN (Protein kinase-like domain-containing protein OS=Artemisia annua OX=35608 GN=CTI12_AA630380 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.7e-08
Identity = 40/95 (42.11%), Postives = 58/95 (61.05%), Query Frame = 0


Query: 27  HGSFWFRGRLLDKGSFGSVFLAQINTDFFIDSHYGKLPLGKYIAVKSSFFKDSPSLRFEK 86
           HG+ WFRG ++ KGS+GSVF+A +NT    +S Y   P    +AVKS+    S SL+ EK
Sbjct: 40  HGASWFRGSIIGKGSYGSVFVANLNT----ESGYTSYP--SIMAVKSAEVSVSGSLKKEK 99

Query: 87  KVLVAFKFCSNVVQCYGHEITKSVSGN--YIIVLE 120
           +V+   +    V++CYG EITK  +    Y ++LE
Sbjct: 100 EVMDDIRGSPYVIKCYGDEITKGENNKMAYNLLLE 128

[Close]

BLAST of Bhi03G001901 vs. TrEMBL
Match: tr|A0A2C9U2J9|A0A2C9U2J9_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_18G113700 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.0e-07
Identity = 39/99 (39.39%), Postives = 57/99 (57.58%), Query Frame = 0


Query: 23  FDNSHGSFWFRGRLLDKGSFGSVFLAQINTDFFIDSHYGKLPLGKYIAVKSSFFKDSPSL 82
           F+N+HG  W+RG LL KG FGSV+LA +      ++ Y  +     +AVKS+    S SL
Sbjct: 13  FNNNHGVAWWRGSLLGKGGFGSVYLAYLKKPKSRNAFYRPV-----MAVKSAEVSSSSSL 72

Query: 83  RFEKKVLVAFKFCSNVVQCYGHEITKSVSGN--YIIVLE 120
           + EK+V      C  +++CYG E T S +G   Y ++LE
Sbjct: 73  QKEKEVFNNLHDCPYILECYGEETTVSENGQMVYNLLLE 106

[Close]

BLAST of Bhi03G001901 vs. TrEMBL
Match: tr|A0A124SGD8|A0A124SGD8_CYNCS (Protein kinase, ATP binding site-containing protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_015563 PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.7e-07
Identity = 39/94 (41.49%), Postives = 54/94 (57.45%), Query Frame = 0


Query: 28  GSFWFRGRLLDKGSFGSVFLAQINTDFFIDSHYGKLPLGKYIAVKSSFFKDSPSLRFEKK 87
           G  WFRG L+ KG FGSVFLA +       S Y   P    +AVKS+    S S++ E++
Sbjct: 36  GMAWFRGSLIGKGCFGSVFLANLKKP---KSRYSSYP--PIMAVKSAEVSVSSSIQKERE 95

Query: 88  VLVAFKFCSNVVQCYGHEITKSVSGN--YIIVLE 120
           VL   + C NV++C+G EIT   +G   Y ++LE
Sbjct: 96  VLNNIRGCRNVIRCFGEEITTGENGQMVYNLLLE 124

[Close]

BLAST of Bhi03G001901 vs. TrEMBL
Match: tr|A0A2K2A427|A0A2K2A427_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G181000v3 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.3e-07
Identity = 42/102 (41.18%), Postives = 58/102 (56.86%), Query Frame = 0


Query: 24  DNSHGSFWFRGRLLDKGSFGSVFLAQINTDFFIDSHYGKLPLGKYIAVKSSFFKDSPSLR 83
           + SHG  W R  LL KG +GSVFLA+  T     +  G LP    IAVKS+  +++ +L+
Sbjct: 58  ETSHGVTWARCCLLGKGGYGSVFLAKRKT----TTSDGDLP--DKIAVKSASLENASTLK 117

Query: 84  FEKKVLVAFKFCSNVVQCYGHEITKSVSGN---YIIVLEVVC 123
            EK+VL   K   NV++CYG EIT +       Y ++LE  C
Sbjct: 118 HEKRVLCDLKASPNVIKCYGDEITDTGCDGEKIYNLLLEFCC 153

[Close]

BLAST of Bhi03G001901 vs. NCBI nr
Match: GAV87942.1 (Pkinase domain-containing protein [Cephalotus follicularis])

HSP 1 Score: 68.6 bits (166), Expect = 2.4e-08
Identity = 42/98 (42.86%), Postives = 59/98 (60.20%), Query Frame = 0


Query: 24  DNSHGSFWFRGRLLDKGSFGSVFLAQINTDFFIDSHYGKLPLGKYIAVKSSFFKDSPSLR 83
           +NSHG+ W RGRLL +G FGSVFL +       +  + +LP    +AVKS+    + +L+
Sbjct: 21  NNSHGASWVRGRLLGQGGFGSVFLGKSRKP---NEDHNQLP--ALMAVKSADMDQAHTLK 80

Query: 84  FEKKVLVAFKFCSNVVQCYGHEITKSVSGN--YIIVLE 120
            EK+VL   K    VV+CYG E+T+S  G   Y I+LE
Sbjct: 81  HEKQVLSTLKNSPFVVKCYGDEVTESGDGKVIYNILLE 113

[Close]

BLAST of Bhi03G001901 vs. NCBI nr
Match: PWA17123.1 (protein kinase-like domain-containing protein [Artemisia annua])

HSP 1 Score: 67.8 bits (164), Expect = 4.1e-08
Identity = 40/95 (42.11%), Postives = 58/95 (61.05%), Query Frame = 0


Query: 27  HGSFWFRGRLLDKGSFGSVFLAQINTDFFIDSHYGKLPLGKYIAVKSSFFKDSPSLRFEK 86
           HG+ WFRG ++ KGS+GSVF+A +NT    +S Y   P    +AVKS+    S SL+ EK
Sbjct: 40  HGASWFRGSIIGKGSYGSVFVANLNT----ESGYTSYP--SIMAVKSAEVSVSGSLKKEK 99

Query: 87  KVLVAFKFCSNVVQCYGHEITKSVSGN--YIIVLE 120
           +V+   +    V++CYG EITK  +    Y ++LE
Sbjct: 100 EVMDDIRGSPYVIKCYGDEITKGENNKMAYNLLLE 128

[Close]

BLAST of Bhi03G001901 vs. NCBI nr
Match: XP_022960664.1 (mitogen-activated protein kinase kinase kinase 17-like [Cucurbita moschata])

HSP 1 Score: 66.2 bits (160), Expect = 1.2e-07
Identity = 40/101 (39.60%), Postives = 54/101 (53.47%), Query Frame = 0


Query: 24  DNSHGSFWFRGRLLDKGSFGSVFLAQINTDFFIDSHYGKLPLGKYIAVKSSFFKDSPSLR 83
           +  HGSFW   RL+ +   G VFLA+  +    +S +          VKS   + S SL+
Sbjct: 60  EECHGSFWIGDRLIRRSGSGLVFLAKNKSSTNSNSEF---------LVKSCLMESSSSLQ 119

Query: 84  FEKKVLVAFKFCSNVVQCYGHEITKSVSGN--YIIVLEVVC 123
           +EK+VL     CSN+V+CYG EIT S SG   Y +V E  C
Sbjct: 120 YEKEVLCNLGPCSNLVRCYGDEITMSKSGEQIYNVVFEYCC 151

[Close]

BLAST of Bhi03G001901 vs. NCBI nr
Match: OAY23867.1 (hypothetical protein MANES_18G113700 [Manihot esculenta])

HSP 1 Score: 65.9 bits (159), Expect = 1.6e-07
Identity = 39/99 (39.39%), Postives = 57/99 (57.58%), Query Frame = 0


Query: 23  FDNSHGSFWFRGRLLDKGSFGSVFLAQINTDFFIDSHYGKLPLGKYIAVKSSFFKDSPSL 82
           F+N+HG  W+RG LL KG FGSV+LA +      ++ Y  +     +AVKS+    S SL
Sbjct: 13  FNNNHGVAWWRGSLLGKGGFGSVYLAYLKKPKSRNAFYRPV-----MAVKSAEVSSSSSL 72

Query: 83  RFEKKVLVAFKFCSNVVQCYGHEITKSVSGN--YIIVLE 120
           + EK+V      C  +++CYG E T S +G   Y ++LE
Sbjct: 73  QKEKEVFNNLHDCPYILECYGEETTVSENGQMVYNLLLE 106

[Close]

BLAST of Bhi03G001901 vs. NCBI nr
Match: KVI06091.1 (Protein kinase, ATP binding site-containing protein [Cynara cardunculus var. scolymus])

HSP 1 Score: 65.1 bits (157), Expect = 2.6e-07
Identity = 39/94 (41.49%), Postives = 54/94 (57.45%), Query Frame = 0


Query: 28  GSFWFRGRLLDKGSFGSVFLAQINTDFFIDSHYGKLPLGKYIAVKSSFFKDSPSLRFEKK 87
           G  WFRG L+ KG FGSVFLA +       S Y   P    +AVKS+    S S++ E++
Sbjct: 36  GMAWFRGSLIGKGCFGSVFLANLKKP---KSRYSSYP--PIMAVKSAEVSVSSSIQKERE 95

Query: 88  VLVAFKFCSNVVQCYGHEITKSVSGN--YIIVLE 120
           VL   + C NV++C+G EIT   +G   Y ++LE
Sbjct: 96  VLNNIRGCRNVIRCFGEEITTGENGQMVYNLLLE 124

The following BLAST results are available for this feature:

BLAST of Bhi03G001901 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi03G001901 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G41910.1	3.0e-05	34.83	Protein kinase superfamily protein	[more]
AT2G05060.1	2.0e-04	35.06	Protein kinase superfamily protein	[more]
AT2G34290.1	2.6e-04	36.36	Protein kinase superfamily protein	[more]

BLAST of Bhi03G001901 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1Q3D664\|A0A1Q3D664_CEPFO	1.6e-08	42.86	Pkinase domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_...	[more]
tr\|A0A2U1K902\|A0A2U1K902_ARTAN	2.7e-08	42.11	Protein kinase-like domain-containing protein OS=Artemisia annua OX=35608 GN=CTI...	[more]
tr\|A0A2C9U2J9\|A0A2C9U2J9_MANES	1.0e-07	39.39	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_18G113700 PE=3 SV=...	[more]
tr\|A0A124SGD8\|A0A124SGD8_CYNCS	1.7e-07	41.49	Protein kinase, ATP binding site-containing protein OS=Cynara cardunculus var. s...	[more]
tr\|A0A2K2A427\|A0A2K2A427_POPTR	2.3e-07	41.18	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G181000v3 PE=...	[more]

BLAST of Bhi03G001901 vs. NCBI nr


Match Name	E-value	Identity	Description
GAV87942.1	2.4e-08	42.86	Pkinase domain-containing protein [Cephalotus follicularis]	[more]
PWA17123.1	4.1e-08	42.11	protein kinase-like domain-containing protein [Artemisia annua]	[more]
XP_022960664.1	1.2e-07	39.60	mitogen-activated protein kinase kinase kinase 17-like [Cucurbita moschata]	[more]
OAY23867.1	1.6e-07	39.39	hypothetical protein MANES_18G113700 [Manihot esculenta]	[more]
KVI06091.1	2.6e-07	41.49	Protein kinase, ATP binding site-containing protein [Cynara cardunculus var. sco...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011009	Kinase-like_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
molecular_function	GO:0016301	kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi03M001901	Bhi03M001901	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.30.200.20		coord: 9..120 e-value: 3.4E-5 score: 25.7
None	No IPR available	PANTHER	PTHR24361:SF475	SUBFAMILY NOT NAMED	coord: 29..120
None	No IPR available	PANTHER	PTHR24361	MITOGEN-ACTIVATED KINASE KINASE KINASE	coord: 29..120
IPR011009	Protein kinase-like domain superfamily	SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	coord: 28..161

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi03G001901	Bottle gourd (USVL1VR-Ls)	lsiwgoB169
Bhi03G001901	Bottle gourd (USVL1VR-Ls)	lsiwgoB189
Bhi03G001901	Melon (DHL92) v3.6.1	medwgoB656
Bhi03G001901	Melon (DHL92) v3.6.1	medwgoB666
Bhi03G001901	Melon (DHL92) v3.5.1	mewgoB649
Bhi03G001901	Melon (DHL92) v3.5.1	mewgoB660
Bhi03G001901	Watermelon (Charleston Gray)	wcgwgoB388
Bhi03G001901	Watermelon (97103) v2	wgowmbB428