Bhi03G001898 (gene) Wax gourd

NameBhi03G001898
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr3 : 52368084 .. 52368446 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAAAACGCAAGAAAATGGCCTCAATGAAAATGTTTTTAGGAGGCTGGTTGCTTGTTCTTCTAGGGTTTCATCATGCCAGCAATGTGGTGGTAGCCAACTTCGGAATGTACCCGAAAGGGATACCGATTCCTCCGTCTGGGCCGAGCCGGCCACCTTCGAAGTTGAACTTCAAAATGTATCCAAAGGGCATACCTATTCCACCCTCTGGGCCGAGCCAAAGGACATCAGACTCTGCTCCGCCGCCTCCATCCAATTTCGATTTCGTGATGTATCCAAGAACACCTGTTCCACCGTCTGGGCCGAGTCAGAGGACATCGGATTCTTCTCCGCCTCCTCCGTCCACTCGACTCAACTTCTAG

mRNA sequence

ATGGTAAAACGCAAGAAAATGGCCTCAATGAAAATGTTTTTAGGAGGCTGGTTGCTTGTTCTTCTAGGGTTTCATCATGCCAGCAATGTGGTGGTAGCCAACTTCGGAATGTACCCGAAAGGGATACCGATTCCTCCGTCTGGGCCGAGCCGGCCACCTTCGAAGTTGAACTTCAAAATGTATCCAAAGGGCATACCTATTCCACCCTCTGGGCCGAGCCAAAGGACATCAGACTCTGCTCCGCCGCCTCCATCCAATTTCGATTTCGTGATGTATCCAAGAACACCTGTTCCACCGTCTGGGCCGAGTCAGAGGACATCGGATTCTTCTCCGCCTCCTCCGTCCACTCGACTCAACTTCTAG

Coding sequence (CDS)

ATGGTAAAACGCAAGAAAATGGCCTCAATGAAAATGTTTTTAGGAGGCTGGTTGCTTGTTCTTCTAGGGTTTCATCATGCCAGCAATGTGGTGGTAGCCAACTTCGGAATGTACCCGAAAGGGATACCGATTCCTCCGTCTGGGCCGAGCCGGCCACCTTCGAAGTTGAACTTCAAAATGTATCCAAAGGGCATACCTATTCCACCCTCTGGGCCGAGCCAAAGGACATCAGACTCTGCTCCGCCGCCTCCATCCAATTTCGATTTCGTGATGTATCCAAGAACACCTGTTCCACCGTCTGGGCCGAGTCAGAGGACATCGGATTCTTCTCCGCCTCCTCCGTCCACTCGACTCAACTTCTAG

Protein sequence

MVKRKKMASMKMFLGGWLLVLLGFHHASNVVVANFGMYPKGIPIPPSGPSRPPSKLNFKMYPKGIPIPPSGPSQRTSDSAPPPPSNFDFVMYPRTPVPPSGPSQRTSDSSPPPPSTRLNF
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi03M001898Bhi03M001898mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..109
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..120
NoneNo IPR availablePANTHERPTHR33599FAMILY NOT NAMEDcoord: 55..78
NoneNo IPR availablePANTHERPTHR33599:SF3PROTEIN IDAcoord: 34..51
NoneNo IPR availablePANTHERPTHR33599:SF3PROTEIN IDAcoord: 55..78
NoneNo IPR availablePANTHERPTHR33599FAMILY NOT NAMEDcoord: 34..51

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Bhi03G001898MELO3C008860Melon (DHL92) v3.5.1mewgoB660
Bhi03G001898Lsi01G017050Bottle gourd (USVL1VR-Ls)lsiwgoB169
Bhi03G001898MELO3C008860.2Melon (DHL92) v3.6.1medwgoB666
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi03G001898Bottle gourd (USVL1VR-Ls)lsiwgoB189
Bhi03G001898Melon (DHL92) v3.6.1medwgoB656
Bhi03G001898Melon (DHL92) v3.5.1mewgoB649
Bhi03G001898Watermelon (Charleston Gray)wcgwgoB388
Bhi03G001898Watermelon (97103) v2wgowmbB428