Bhi03G001833 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi03G001833
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	CCR4-NOT transcription complex subunit 8
Location	chr3 : 50664679 .. 50665461 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAGAAGAAATCGAGCACGTTCGAGAAGAGAACCTTTGATTCGACAAGTTTGGGTTTCGAATTTCGATTCCAAAATCTCCAAATTCGATGAATGCCTTCGATCTCACTCAATTCTGTCTATCGACACAGAATTTGCTGGTTTTATCAGAAAATCTCCACGGGGTTTGATTGAAGAAGCCATTTACGATGACTTCCGATTCAATGTCAACCAAATGAAACTGATTCAATTGTGTATAACAACTTGTGATGATTCTGGTCATATCAGCGGCACATGGGATTTCAATTTCTCTGATTTCGACTCGGAAGCCGACGCTTAAGGCTCTTCTTTTGTTTCGTTTCTAGAACAGAACGACATCGATTTAAAAAAACTGAAGAAAGATGGAATGCCCATCAGATTATTTGTTGCATTCCTACCTATCATCCGAAAGCATAACGTTTTTAGATGGGTCACCTTCCATGAACTCTACGATATTGGGTATCTGATCAAAGCGATGGGTTTGATCACCGTCTTTCCAGAATCAATGGAGGAATTCGCGATAGTGGTGGTGAATGGGCTGGGAATTGTGAGGGATTTAAAACATATGGCTCGATTCTGTGAAGGATTAGAAGATAAGAAACTTGGGCTTCAAAGACTAGGGTATTTGCATAATCAAAAACGATTTGGATCGAAGCATAACGCTGGATCCGATAGTTTACTCACAGCTTCTGCGCATTTTGAGGTGATGCATCGATTTGATATGGATTCAGTGGTTTGTGATGGATTCTTATATAGTTTTTGA

mRNA sequence

ATGGGTAGAAGAAATCGAGCACGTTCGAGAAGAGAACCTTTGATTCGACAAGTTTGGGTTTCGAATTTCGATTCCAAAATCTCCAAATTCGATGAATGCCTTCGATCTCACTCAATTCTGTCTATCGACACAGAATTTGCTGGTTTTATCAGAAAATCTCCACGGGGTTTGATTGAAGAAGCCATTTACGATGACTTCCGATTCAATGTCAACCAAATGAAACTGATTCAATTGTGTATAACAACTTGTGATGATTCTGGCTCTTCTTTTGTTTCGTTTCTAGAACAGAACGACATCGATTTAAAAAAACTGAAGAAAGATGGAATGCCCATCAGATTATTTGTTGCATTCCTACCTATCATCCGAAAGCATAACGTTTTTAGATGGGTCACCTTCCATGAACTCTACGATATTGGGTATCTGATCAAAGCGATGGGTTTGATCACCGTCTTTCCAGAATCAATGGAGGAATTCGCGATAGTGGTGGTGAATGGGCTGGGAATTGTGAGGGATTTAAAACATATGGCTCGATTCTGTGAAGGATTAGAAGATAAGAAACTTGGGCTTCAAAGACTAGGGTATTTGCATAATCAAAAACGATTTGGATCGAAGCATAACGCTGGATCCGATAGTTTACTCACAGCTTCTGCGCATTTTGAGGTGATGCATCGATTTGATATGGATTCAGTGGTTTGTGATGGATTCTTATATAGTTTTTGA

Coding sequence (CDS)

ATGGGTAGAAGAAATCGAGCACGTTCGAGAAGAGAACCTTTGATTCGACAAGTTTGGGTTTCGAATTTCGATTCCAAAATCTCCAAATTCGATGAATGCCTTCGATCTCACTCAATTCTGTCTATCGACACAGAATTTGCTGGTTTTATCAGAAAATCTCCACGGGGTTTGATTGAAGAAGCCATTTACGATGACTTCCGATTCAATGTCAACCAAATGAAACTGATTCAATTGTGTATAACAACTTGTGATGATTCTGGCTCTTCTTTTGTTTCGTTTCTAGAACAGAACGACATCGATTTAAAAAAACTGAAGAAAGATGGAATGCCCATCAGATTATTTGTTGCATTCCTACCTATCATCCGAAAGCATAACGTTTTTAGATGGGTCACCTTCCATGAACTCTACGATATTGGGTATCTGATCAAAGCGATGGGTTTGATCACCGTCTTTCCAGAATCAATGGAGGAATTCGCGATAGTGGTGGTGAATGGGCTGGGAATTGTGAGGGATTTAAAACATATGGCTCGATTCTGTGAAGGATTAGAAGATAAGAAACTTGGGCTTCAAAGACTAGGGTATTTGCATAATCAAAAACGATTTGGATCGAAGCATAACGCTGGATCCGATAGTTTACTCACAGCTTCTGCGCATTTTGAGGTGATGCATCGATTTGATATGGATTCAGTGGTTTGTGATGGATTCTTATATAGTTTTTGA

Protein sequence

MGRRNRARSRREPLIRQVWVSNFDSKISKFDECLRSHSILSIDTEFAGFIRKSPRGLIEEAIYDDFRFNVNQMKLIQLCITTCDDSGSSFVSFLEQNDIDLKKLKKDGMPIRLFVAFLPIIRKHNVFRWVTFHELYDIGYLIKAMGLITVFPESMEEFAIVVVNGLGIVRDLKHMARFCEGLEDKKLGLQRLGYLHNQKRFGSKHNAGSDSLLTASAHFEVMHRFDMDSVVCDGFLYSF

Homology

[Close]

BLAST of Bhi03G001833 vs. Swiss-Prot
Match: sp|O64773|CAF1E_ARATH (Probable CCR4-associated factor 1 homolog 5 OS=Arabidopsis thaliana OX=3702 GN=CAF1-5 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.2e-26
Identity = 79/221 (35.75%), Postives = 120/221 (54.30%), Query Frame = 0


Query: 17  QVWVSNFDSKISKFDECLRSHSILSIDTEFAGFIRKSPRGLIEEAIYDDFRFNVNQMKLI 76
           +VW  N  ++++   +CL+  + ++IDTEF G ++++P    +E  Y D +FNV+   LI
Sbjct: 4   EVWRWNKQAEMNSIRDCLKHCNSIAIDTEFPGCLKETPMDASDEIRYRDMKFNVDNTHLI 63

Query: 77  QLCIT--------TCDDSGSSF-----------VSFLEQNDIDLKKLKKDGMPI-RLFVA 136
           QL +T        T + + S F           ++FL+ N +DL K++++G+ I   F+ 
Sbjct: 64  QLGLTLFGKGITKTWEINLSDFNESKSLKNDKSIAFLKNNGLDLDKIREEGIGIEEFFME 123

Query: 137 FLPII-RKHNVFRWVTFHELYDIGYLIKAMGLITVFPESMEEFAIVVVNGLG-IVRDLKH 196
           F  I+  KH   RWVTF   YD  YL+K +      PE+ +EF   V   LG  V D+K 
Sbjct: 124 FSQILNEKHGKMRWVTFQGSYDKAYLLKGL-TRKPLPETSKEFDETVQQLLGRFVYDVKK 183

Query: 197 MARFCEGLEDKKLGLQRLGYLHNQKRFGSKHNAGSDSLLTA 216
           MA  C GL   + GLQR+  +   +R G  H+AGSDS LTA
Sbjct: 184 MAGLCSGL-SSRFGLQRIADVLQMRRVGKAHHAGSDSELTA 222

[Close]

BLAST of Bhi03G001833 vs. Swiss-Prot
Match: sp|Q9LXM4|CAF1H_ARATH (Putative CCR4-associated factor 1 homolog 8 OS=Arabidopsis thaliana OX=3702 GN=CAF1-8 PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.2e-26
Identity = 78/223 (34.98%), Postives = 119/223 (53.36%), Query Frame = 0


Query: 27  ISKFDECLRSHSILSIDTEFAGFIRKSPRGLIEEAIYDDFRFNVNQMKLIQLCITTCDDS 86
           +S  ++CLRS+  ++IDTEF   +R++ +   +E  Y D  F+V++ KLIQL +T  D +
Sbjct: 1   MSLIEDCLRSYRFIAIDTEFPSTLRETTQHATDEERYMDMSFSVDRAKLIQLGLTLFDIN 60

Query: 87  G----------SSF----------VSFLEQNDIDLKKLKKDGMPIRLFVA--FLPIIRKH 146
           G          S F          + FL +N +DL+K++++G+ I  F +  F  + +  
Sbjct: 61  GRIGGTWEINFSDFGVDDARNEKSIEFLRRNGLDLRKIREEGIRIEGFFSEMFWMLKKTR 120

Query: 147 NVFRWVTFHELYDIGYLIKAMGLITVFPESMEEFAIVVVNGLGIVRDLKHMARFCEGLED 206
               WVTFH  YDI YL+K        P + E F+  V   LG V DLK MA  CEGL  
Sbjct: 121 RNITWVTFHGSYDIAYLLKGF-TGEALPVTSERFSKAVARVLGSVYDLKVMAGRCEGL-S 180

Query: 207 KKLGLQRLGYLHNQKRFGSKHNAGSDSLLTASAHFEVMHRFDM 228
            +LGL+ L +     R G+ H+AGS++ LTA    +V+  F +
Sbjct: 181 SRLGLETLAHEFGLNRVGTAHHAGSNNELTAMVFAKVLSPFPL 221

[Close]

BLAST of Bhi03G001833 vs. Swiss-Prot
Match: sp|Q9SHJ0|CAF1A_ARATH (Probable CCR4-associated factor 1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=CAF1-1 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.2e-25
Identity = 80/250 (32.00%), Postives = 122/250 (48.80%), Query Frame = 0


Query: 12  EPLIRQVWVSNFDSKISKFDECLRSHSILSIDTEFAGFIRKSPRGLIEEAIYDDFRFNVN 71
           +PL R+VW SN D ++++  ECL+   +++ DTE+ G I ++      +  Y   + NV 
Sbjct: 6   QPLARRVWRSNVDEEMARMAECLKRFPLIAFDTEYPGIIFRTYFDSSSDECYRAMKGNVE 65

Query: 72  QMKLIQLCITTCDDSG----------SSF-----------VSFLEQNDIDLKKLKKDGMP 131
             KLIQ   T  +  G          S+F           + FL ++ +DL+K++ +G+ 
Sbjct: 66  NTKLIQCGFTLFNAKGEIGGVWEINFSNFGDPSDTRNELSIEFLRRHGLDLQKIRDEGVD 125

Query: 132 I---RLFVAFLPIIRKHNVFRWVTFHELYDIGYLIKAMGLITVFPESMEEFAIVVVNGLG 191
           +     F   + + R      +VTF   YD  Y +  +      PE+  EFA  VV   G
Sbjct: 126 MFGYGFFPKLMTVFRSQKHVEFVTFQGAYDFAYFLSILN-HGKLPETHGEFATEVVKVFG 185

Query: 192 IVRDLKHMARFCEGLEDKKLGLQRLGYLHNQKRFGSKHNAGSDSLLTASAHFEVMHRFDM 238
            V D K MA FCEGL  + LGL +L  L    R G  H+AGSDSL+TA    ++ H ++ 
Sbjct: 186 QVYDTKVMAGFCEGL-GEHLGLSKLAQLLQITRVGRAHHAGSDSLMTALVFIKLKHVYE- 245

[Close]

BLAST of Bhi03G001833 vs. Swiss-Prot
Match: sp|Q9SFX6|CAF1C_ARATH (Putative CCR4-associated factor 1 homolog 3 OS=Arabidopsis thaliana OX=3702 GN=CAF1-3 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 7.9e-25
Identity = 79/222 (35.59%), Postives = 114/222 (51.35%), Query Frame = 0


Query: 17  QVWVSNFDSKISKFDECLRSHSILSIDTEFAGFIRKSPRGLIEEAIYDDFRFNVNQMKLI 76
           +VW  N + +++   +CL+  S ++IDTEF G ++++P    EE  Y D +FNV+   LI
Sbjct: 8   EVWRWNKEVEMNSIRDCLKHCSSIAIDTEFPGCLKETPMDASEEIRYRDMKFNVDNTHLI 67

Query: 77  QLCITTCDDSG---------SSF-----------VSFLEQNDIDLKKLKKDGMPI-RLFV 136
           QL  T  D  G         S F           ++FL+ N ++L K++++G+ I   F 
Sbjct: 68  QLGFTLFDRRGFAKTWEINLSDFDEHKCFKNDKSIAFLKSNGLNLDKIREEGIGIDEFFR 127

Query: 137 AFLPII-RKHNVFRWVTFHELYDIGYLIKAMGLITVFPESMEEFAIVVVNGLG-IVRDLK 196
            F  I+  K     WV F   YD  YL+K +      PE+ EEF   V   LG  V D+K
Sbjct: 128 DFSQILTEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVQQLLGKFVFDVK 187

Query: 197 HMARFCEGLEDKKLGLQRLGYLHNQKRFGSKHNAGSDSLLTA 216
            +A  C GL   + GLQR+  +   KR G  H+AGSDS LTA
Sbjct: 188 KIAESCSGL-SSQFGLQRIADVLQMKRVGKAHHAGSDSELTA 228

[Close]

BLAST of Bhi03G001833 vs. Swiss-Prot
Match: sp|Q9C6M9|CAF1D_ARATH (Putative CCR4-associated factor 1 homolog 4 OS=Arabidopsis thaliana OX=3702 GN=CAF1-4 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 7.9e-25
Identity = 79/222 (35.59%), Postives = 113/222 (50.90%), Query Frame = 0


Query: 17  QVWVSNFDSKISKFDECLRSHSILSIDTEFAGFIRKSPRGLIEEAIYDDFRFNVNQMKLI 76
           +VW  N + ++    +CL+  S ++IDTEF G ++++P    EE  Y D +FNV+   LI
Sbjct: 3   EVWRWNKEVEMDSIRDCLKHFSSIAIDTEFPGCLKETPMDASEEIRYRDMKFNVDNTHLI 62

Query: 77  QLCITTCDDSG---------SSF-----------VSFLEQNDIDLKKLKKDGMPI-RLFV 136
           QL  T  D  G         S F           ++FL+ N ++L K+ ++G+ I   F 
Sbjct: 63  QLGFTLFDRRGITKTWEINLSDFNEHKCFKNDKSIAFLKSNGLNLDKIGEEGIGIEEFFR 122

Query: 137 AFLPIIR-KHNVFRWVTFHELYDIGYLIKAMGLITVFPESMEEFAIVVVNGLG-IVRDLK 196
            F  I++ K     WV F   YD  YL+K +      PE+ EEF   V   LG  V D+K
Sbjct: 123 DFSQILKEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVEQLLGKFVFDVK 182

Query: 197 HMARFCEGLEDKKLGLQRLGYLHNQKRFGSKHNAGSDSLLTA 216
            +A  C GL   + GLQR+  +   KR G  H+AGSDS LTA
Sbjct: 183 KIAESCSGL-SSRFGLQRIADVLQMKRVGKAHHAGSDSELTA 223

[Close]

BLAST of Bhi03G001833 vs. TAIR10
Match: AT1G61470.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 120.2 bits (300), Expect = 1.8e-27
Identity = 79/221 (35.75%), Postives = 120/221 (54.30%), Query Frame = 0


Query: 17  QVWVSNFDSKISKFDECLRSHSILSIDTEFAGFIRKSPRGLIEEAIYDDFRFNVNQMKLI 76
           +VW  N  ++++   +CL+  + ++IDTEF G ++++P    +E  Y D +FNV+   LI
Sbjct: 4   EVWRWNKQAEMNSIRDCLKHCNSIAIDTEFPGCLKETPMDASDEIRYRDMKFNVDNTHLI 63

Query: 77  QLCIT--------TCDDSGSSF-----------VSFLEQNDIDLKKLKKDGMPI-RLFVA 136
           QL +T        T + + S F           ++FL+ N +DL K++++G+ I   F+ 
Sbjct: 64  QLGLTLFGKGITKTWEINLSDFNESKSLKNDKSIAFLKNNGLDLDKIREEGIGIEEFFME 123

Query: 137 FLPII-RKHNVFRWVTFHELYDIGYLIKAMGLITVFPESMEEFAIVVVNGLG-IVRDLKH 196
           F  I+  KH   RWVTF   YD  YL+K +      PE+ +EF   V   LG  V D+K 
Sbjct: 124 FSQILNEKHGKMRWVTFQGSYDKAYLLKGL-TRKPLPETSKEFDETVQQLLGRFVYDVKK 183

Query: 197 MARFCEGLEDKKLGLQRLGYLHNQKRFGSKHNAGSDSLLTA 216
           MA  C GL   + GLQR+  +   +R G  H+AGSDS LTA
Sbjct: 184 MAGLCSGL-SSRFGLQRIADVLQMRRVGKAHHAGSDSELTA 222

[Close]

BLAST of Bhi03G001833 vs. TAIR10
Match: AT3G44240.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 120.2 bits (300), Expect = 1.8e-27
Identity = 78/223 (34.98%), Postives = 119/223 (53.36%), Query Frame = 0


Query: 27  ISKFDECLRSHSILSIDTEFAGFIRKSPRGLIEEAIYDDFRFNVNQMKLIQLCITTCDDS 86
           +S  ++CLRS+  ++IDTEF   +R++ +   +E  Y D  F+V++ KLIQL +T  D +
Sbjct: 1   MSLIEDCLRSYRFIAIDTEFPSTLRETTQHATDEERYMDMSFSVDRAKLIQLGLTLFDIN 60

Query: 87  G----------SSF----------VSFLEQNDIDLKKLKKDGMPIRLFVA--FLPIIRKH 146
           G          S F          + FL +N +DL+K++++G+ I  F +  F  + +  
Sbjct: 61  GRIGGTWEINFSDFGVDDARNEKSIEFLRRNGLDLRKIREEGIRIEGFFSEMFWMLKKTR 120

Query: 147 NVFRWVTFHELYDIGYLIKAMGLITVFPESMEEFAIVVVNGLGIVRDLKHMARFCEGLED 206
               WVTFH  YDI YL+K        P + E F+  V   LG V DLK MA  CEGL  
Sbjct: 121 RNITWVTFHGSYDIAYLLKGF-TGEALPVTSERFSKAVARVLGSVYDLKVMAGRCEGL-S 180

Query: 207 KKLGLQRLGYLHNQKRFGSKHNAGSDSLLTASAHFEVMHRFDM 228
            +LGL+ L +     R G+ H+AGS++ LTA    +V+  F +
Sbjct: 181 SRLGLETLAHEFGLNRVGTAHHAGSNNELTAMVFAKVLSPFPL 221

[Close]

BLAST of Bhi03G001833 vs. TAIR10
Match: AT1G06450.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 118.2 bits (295), Expect = 6.8e-27
Identity = 80/250 (32.00%), Postives = 122/250 (48.80%), Query Frame = 0


Query: 12  EPLIRQVWVSNFDSKISKFDECLRSHSILSIDTEFAGFIRKSPRGLIEEAIYDDFRFNVN 71
           +PL R+VW SN D ++++  ECL+   +++ DTE+ G I ++      +  Y   + NV 
Sbjct: 6   QPLARRVWRSNVDEEMARMAECLKRFPLIAFDTEYPGIIFRTYFDSSSDECYRAMKGNVE 65

Query: 72  QMKLIQLCITTCDDSG----------SSF-----------VSFLEQNDIDLKKLKKDGMP 131
             KLIQ   T  +  G          S+F           + FL ++ +DL+K++ +G+ 
Sbjct: 66  NTKLIQCGFTLFNAKGEIGGVWEINFSNFGDPSDTRNELSIEFLRRHGLDLQKIRDEGVD 125

Query: 132 I---RLFVAFLPIIRKHNVFRWVTFHELYDIGYLIKAMGLITVFPESMEEFAIVVVNGLG 191
           +     F   + + R      +VTF   YD  Y +  +      PE+  EFA  VV   G
Sbjct: 126 MFGYGFFPKLMTVFRSQKHVEFVTFQGAYDFAYFLSILN-HGKLPETHGEFATEVVKVFG 185

Query: 192 IVRDLKHMARFCEGLEDKKLGLQRLGYLHNQKRFGSKHNAGSDSLLTASAHFEVMHRFDM 238
            V D K MA FCEGL  + LGL +L  L    R G  H+AGSDSL+TA    ++ H ++ 
Sbjct: 186 QVYDTKVMAGFCEGL-GEHLGLSKLAQLLQITRVGRAHHAGSDSLMTALVFIKLKHVYE- 245

[Close]

BLAST of Bhi03G001833 vs. TAIR10
Match: AT1G27890.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 115.5 bits (288), Expect = 4.4e-26
Identity = 79/222 (35.59%), Postives = 113/222 (50.90%), Query Frame = 0


Query: 17  QVWVSNFDSKISKFDECLRSHSILSIDTEFAGFIRKSPRGLIEEAIYDDFRFNVNQMKLI 76
           +VW  N + ++    +CL+  S ++IDTEF G ++++P    EE  Y D +FNV+   LI
Sbjct: 3   EVWRWNKEVEMDSIRDCLKHFSSIAIDTEFPGCLKETPMDASEEIRYRDMKFNVDNTHLI 62

Query: 77  QLCITTCDDSG---------SSF-----------VSFLEQNDIDLKKLKKDGMPI-RLFV 136
           QL  T  D  G         S F           ++FL+ N ++L K+ ++G+ I   F 
Sbjct: 63  QLGFTLFDRRGITKTWEINLSDFNEHKCFKNDKSIAFLKSNGLNLDKIGEEGIGIEEFFR 122

Query: 137 AFLPIIR-KHNVFRWVTFHELYDIGYLIKAMGLITVFPESMEEFAIVVVNGLG-IVRDLK 196
            F  I++ K     WV F   YD  YL+K +      PE+ EEF   V   LG  V D+K
Sbjct: 123 DFSQILKEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVEQLLGKFVFDVK 182

Query: 197 HMARFCEGLEDKKLGLQRLGYLHNQKRFGSKHNAGSDSLLTA 216
            +A  C GL   + GLQR+  +   KR G  H+AGSDS LTA
Sbjct: 183 KIAESCSGL-SSRFGLQRIADVLQMKRVGKAHHAGSDSELTA 223

[Close]

BLAST of Bhi03G001833 vs. TAIR10
Match: AT1G27820.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 115.5 bits (288), Expect = 4.4e-26
Identity = 79/222 (35.59%), Postives = 114/222 (51.35%), Query Frame = 0


Query: 17  QVWVSNFDSKISKFDECLRSHSILSIDTEFAGFIRKSPRGLIEEAIYDDFRFNVNQMKLI 76
           +VW  N + +++   +CL+  S ++IDTEF G ++++P    EE  Y D +FNV+   LI
Sbjct: 8   EVWRWNKEVEMNSIRDCLKHCSSIAIDTEFPGCLKETPMDASEEIRYRDMKFNVDNTHLI 67

Query: 77  QLCITTCDDSG---------SSF-----------VSFLEQNDIDLKKLKKDGMPI-RLFV 136
           QL  T  D  G         S F           ++FL+ N ++L K++++G+ I   F 
Sbjct: 68  QLGFTLFDRRGFAKTWEINLSDFDEHKCFKNDKSIAFLKSNGLNLDKIREEGIGIDEFFR 127

Query: 137 AFLPII-RKHNVFRWVTFHELYDIGYLIKAMGLITVFPESMEEFAIVVVNGLG-IVRDLK 196
            F  I+  K     WV F   YD  YL+K +      PE+ EEF   V   LG  V D+K
Sbjct: 128 DFSQILTEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVQQLLGKFVFDVK 187

Query: 197 HMARFCEGLEDKKLGLQRLGYLHNQKRFGSKHNAGSDSLLTA 216
            +A  C GL   + GLQR+  +   KR G  H+AGSDS LTA
Sbjct: 188 KIAESCSGL-SSQFGLQRIADVLQMKRVGKAHHAGSDSELTA 228

[Close]

BLAST of Bhi03G001833 vs. TrEMBL
Match: tr|A0A0A0LPP0|A0A0A0LPP0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G270190 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 7.8e-86
Identity = 173/263 (65.78%), Postives = 200/263 (76.05%), Query Frame = 0


Query: 1   MGRRNRARSRRE-PLIRQVWVSNFDSKISKFDECLRSHSILSIDTEFAGFIRKSPRGLIE 60
           MG RN+ RS RE PLIRQVW SNFDS+I++FDECLR H+IL+IDTEF GFI +SPRG I+
Sbjct: 1   MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSID 60

Query: 61  EAIYDDFRFNVNQMKLIQLCITTCDDSG----------SSF-----------VSFLEQND 120
           + +Y DF FNVNQ KLIQL IT  DD G          S F           + FLE N 
Sbjct: 61  DELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNG 120

Query: 121 IDLKKLKKDGMPIRLFV-AFLPIIRKHNVFRWVTFHELYDIGYLIKAMGLITVFPESMEE 180
           +DLKK+KKDG+PI  F   FLPI+RK ++FRWVTFH LYDIGYLIKAMGLITV P+SMEE
Sbjct: 121 LDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEE 180

Query: 181 FAIVVVNGLGIVRDLKHMARFCEGLEDK-KLGLQRLGYLHNQKRFGSKHNAGSDSLLTAS 240
           FA VVVN +GIVRDLKHMA+FCEGL+D  +LGL+RLG L N KRFG KHNAGSDSLLTAS
Sbjct: 181 FATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTAS 240

[Close]

BLAST of Bhi03G001833 vs. TrEMBL
Match: tr|A0A1S3BY95|A0A1S3BY95_CUCME (putative CCR4-associated factor 1 homolog 8 OS=Cucumis melo OX=3656 GN=LOC103494884 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 6.5e-40
Identity = 99/248 (39.92%), Postives = 141/248 (56.85%), Query Frame = 0


Query: 15  IRQVWVSNFDSKISKFDECLRSHSILSIDTEFAGFIRKSPRGLIEEAIYDDFRFNVNQMK 74
           +R+VW  NF  +++  ++ L    ++++DTEF GF+R +PRG  EE  Y D +FN+N +K
Sbjct: 4   VRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLNHLK 63

Query: 75  LIQLCITTCDDSGS-------SFVSFLEQND---------------IDLKKLKKDGMPIR 134
           ++QL +T  D++         +F  F EQ D                + KK +KDG+P  
Sbjct: 64  ILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNKKGFEFKKQRKDGIPSA 123

Query: 135 LF-VAFLPIIRKHNVFRWVTFHELYDIGYLIKAMGLITVFPESMEEFAIVVVNGLGIVRD 194
            F  AFLPI   + + +W+TFH +YD+ YL+K M +I   PESM EFAI+    LG V D
Sbjct: 124 EFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLM-MIRTMPESMVEFAIIAQRHLGTVND 183

Query: 195 LKHMARFCEGLEDKKLGLQRLGYLHNQKRFGSKHNAGSDSLLTASAHFEVMHRFDMDSVV 240
           LKHM R CE L + +LGL+RL  L N     +  N GSDSLL A A+ ++       S +
Sbjct: 184 LKHMIRNCEYLMNGELGLKRLAELLNVN--DTIFNGGSDSLLIALAYAKMKKTLKFSSEI 243

[Close]

BLAST of Bhi03G001833 vs. TrEMBL
Match: tr|A0A1S4E611|A0A1S4E611_CUCME (putative CCR4-associated factor 1 homolog 8 OS=Cucumis melo OX=3656 GN=LOC107992290 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.5e-39
Identity = 90/153 (58.82%), Postives = 107/153 (69.93%), Query Frame = 0


Query: 16  RQVWVSNFDSKISKFDECLRSHSILSIDTEFAGFIRKSPRGLIEEAIYDDFRFNVNQMKL 75
           RQVW SNF+S+I++FDECLR H+IL+IDTEF GFI +SPR  I+E IY +FRFNVNQMKL
Sbjct: 1   RQVWASNFNSEITQFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKL 60

Query: 76  IQLCITTCDDSGS---------------------SFVSFLEQNDIDLKKLKKDGMPIRLF 135
           IQL IT  +D G                      S + FLE+N +D KKLKK G+PI  F
Sbjct: 61  IQLGITASNDFGQIGGSWEFNFSDFDFQVDSHSPSAIPFLEKNGLDFKKLKKYGIPIASF 120

Query: 136 V-AFLPIIRKHNVFRWVTFHELYDIGYLIKAMG 147
              FLPII+K ++FRWVTFH LYDIGYLIKAMG
Sbjct: 121 TKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMG 153

[Close]

BLAST of Bhi03G001833 vs. TrEMBL
Match: tr|V4TLB7|V4TLB7_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10016106mg PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 5.7e-36
Identity = 94/246 (38.21%), Postives = 135/246 (54.88%), Query Frame = 0


Query: 15  IRQVWVSNFDSKISKFDECLRSHSILSIDTEFAGFIRKSPRGLIEEAIYDDFRFNVNQMK 74
           I  VW  NF+  +   D+ L   ++LSIDTEF GF+R +PR       Y+D +FNV+   
Sbjct: 7   ILNVWCENFEIVMRFLDKLLNCFNVLSIDTEFPGFLRNTPRNAPAVESYNDLKFNVDCTH 66

Query: 75  LIQLCITTCDDSG----------SSF-----------VSFLEQNDIDLKKLKKDGMPIRL 134
           LIQL IT  D+ G          S F           +  L+ + +D  K++KDG+P  +
Sbjct: 67  LIQLGITLSDNEGKISYTFEFNFSDFDLKKDLHAGDSIQLLKDSGLDFDKIRKDGIPRCV 126

Query: 135 FV-AFLPIIRKHNV-FRWVTFHELYDIGYLIKAMGLITVFPESMEEFAIVVVNGLGIVRD 194
           F   FL ++ KH    +WVTFH LYD+ YL+K        P + E F+ V       V D
Sbjct: 127 FAPRFLEVLSKHRENLKWVTFHGLYDVAYLVKIF-TNDALPPTAEAFSGVAALFFQSVFD 186

Query: 195 LKHMARFCEGLEDKKLGLQRLGYLHNQKRFGSKHNAGSDSLLTASAHFEVMHRFDMDSVV 238
           +K +A +C+GL+  KLGL +L  + N KR G  H+AGSDSLLTA+   E+ +R++++   
Sbjct: 187 IKVVAGYCQGLQGLKLGLSKLARILNVKRHGGAHHAGSDSLLTAAVFAEMKNRYELEESA 246

[Close]

BLAST of Bhi03G001833 vs. TrEMBL
Match: tr|A0A2H5PHB6|A0A2H5PHB6_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_136660 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 9.6e-36
Identity = 94/246 (38.21%), Postives = 134/246 (54.47%), Query Frame = 0


Query: 15  IRQVWVSNFDSKISKFDECLRSHSILSIDTEFAGFIRKSPRGLIEEAIYDDFRFNVNQMK 74
           I  VW  NF+  +   D+ L   ++LSIDTEF GF+R +PR       Y+D +FNV+   
Sbjct: 7   ILNVWCENFEIVMRFLDKLLNCFNVLSIDTEFPGFLRNTPRNAPAVESYNDLKFNVDCTH 66

Query: 75  LIQLCITTCDDSG----------SSF-----------VSFLEQNDIDLKKLKKDGMPIRL 134
           LIQL IT  D  G          S F           +  L+ + +D  K++KDG+P  +
Sbjct: 67  LIQLGITLSDKEGKISYTFEFNFSDFDLKKDLHAGDSIQLLKDSGLDFDKIRKDGIPRCV 126

Query: 135 FV-AFLPIIRKHNV-FRWVTFHELYDIGYLIKAMGLITVFPESMEEFAIVVVNGLGIVRD 194
           F   FL ++ KH    +WVTFH LYD+ YL+K        P + E F+ V       V D
Sbjct: 127 FAPRFLEVLSKHRENLKWVTFHGLYDVAYLVKIF-TNDALPPTAEAFSGVAALFFQSVFD 186

Query: 195 LKHMARFCEGLEDKKLGLQRLGYLHNQKRFGSKHNAGSDSLLTASAHFEVMHRFDMDSVV 238
           +K +A +C+GL+  KLGL +L  + N KR G  H+AGSDSLLTA+   E+ +R++++   
Sbjct: 187 IKVVAGYCQGLQGLKLGLSKLARILNVKRHGGAHHAGSDSLLTAAVFAEMKNRYELEESA 246

[Close]

BLAST of Bhi03G001833 vs. NCBI nr
Match: XP_004147072.1 (PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis sativus] >KGN61926.1 hypothetical protein Csa_2G270190 [Cucumis sativus])

HSP 1 Score: 325.9 bits (834), Expect = 1.2e-85
Identity = 173/263 (65.78%), Postives = 200/263 (76.05%), Query Frame = 0


Query: 1   MGRRNRARSRRE-PLIRQVWVSNFDSKISKFDECLRSHSILSIDTEFAGFIRKSPRGLIE 60
           MG RN+ RS RE PLIRQVW SNFDS+I++FDECLR H+IL+IDTEF GFI +SPRG I+
Sbjct: 1   MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSID 60

Query: 61  EAIYDDFRFNVNQMKLIQLCITTCDDSG----------SSF-----------VSFLEQND 120
           + +Y DF FNVNQ KLIQL IT  DD G          S F           + FLE N 
Sbjct: 61  DELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNG 120

Query: 121 IDLKKLKKDGMPIRLFV-AFLPIIRKHNVFRWVTFHELYDIGYLIKAMGLITVFPESMEE 180
           +DLKK+KKDG+PI  F   FLPI+RK ++FRWVTFH LYDIGYLIKAMGLITV P+SMEE
Sbjct: 121 LDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEE 180

Query: 181 FAIVVVNGLGIVRDLKHMARFCEGLEDK-KLGLQRLGYLHNQKRFGSKHNAGSDSLLTAS 240
           FA VVVN +GIVRDLKHMA+FCEGL+D  +LGL+RLG L N KRFG KHNAGSDSLLTAS
Sbjct: 181 FATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTAS 240

[Close]

BLAST of Bhi03G001833 vs. NCBI nr
Match: XP_022146113.1 (putative CCR4-associated factor 1 homolog 8 [Momordica charantia])

HSP 1 Score: 268.1 bits (684), Expect = 2.9e-68
Identity = 144/261 (55.17%), Postives = 179/261 (68.58%), Query Frame = 0


Query: 1   MGRRNRARSRR-EPLIRQVWVSNFDSKISKFDECLRSHSILSIDTEFAGFIRKSPRGLIE 60
           MGR  R  SRR    IR+VW  NFD +++  ++CL  + IL+IDTEF GFIR +P G IE
Sbjct: 1   MGRGKRGHSRRGNAQIREVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIE 60

Query: 61  EAIYDDFRFNVNQMKLIQLCITTCDDSG---------------------SSFVSFLEQND 120
           E +YDDFRFNVN+ KLIQL +T  D+ G                     +S VSFL+QN 
Sbjct: 61  EKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFDPQIDTHNASSVSFLKQNG 120

Query: 121 IDLKKLKKDGMPIRLFV--AFLPIIRKHNVFRWVTFHELYDIGYLIKAMGLITVFPESME 180
           +D  KLK+ G+PI  F   AF  + RKH + RWVTFH LYDIGYL+KAMG+    PESME
Sbjct: 121 LDFDKLKEFGIPINEFTSKAFF-LFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESME 180

Query: 181 EFAIVVVNGLGIVRDLKHMARFCEGLEDKKLGLQRLGYLHNQKRFGSKHNAGSDSLLTAS 238
           EFA +V   LG V DLKHMA+FCEGLED KLGL++L  L NQKRFG+KH+AGSDSLLTAS
Sbjct: 181 EFAELVERALGNVSDLKHMAQFCEGLEDGKLGLEKLAQLMNQKRFGNKHHAGSDSLLTAS 240

[Close]

BLAST of Bhi03G001833 vs. NCBI nr
Match: XP_022947867.1 (putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata])

HSP 1 Score: 262.7 bits (670), Expect = 1.2e-66
Identity = 139/260 (53.46%), Postives = 177/260 (68.08%), Query Frame = 0


Query: 1   MGRRNRARSRRE-PLIRQVWVSNFDSKISKFDECLRSHSILSIDTEFAGFIRKSPRGLIE 60
           MGRRNR R RR  P I++VW SNFD +I + + CL+++ ILSIDTEF G IR +P G I+
Sbjct: 1   MGRRNRERPRRRTPSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSID 60

Query: 61  EAIYDDFRFNVNQMKLIQLCITTCDDSGS---------------------SFVSFLEQND 120
           E +Y+D RFNVNQ KLIQL +T  D+SG                      S ++FLEQN 
Sbjct: 61  ERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSDFDHQIDTQNPSSIAFLEQNG 120

Query: 121 IDLKKLKKDGMPIRLF-VAFLPIIRKHNVFRWVTFHELYDIGYLIKAMGLITVFPESMEE 180
           +D  KLKK G+P+ LF + F  IIR+  V +WVTFH LYDIGYL+KAMG+    PESMEE
Sbjct: 121 LDFAKLKKQGIPLSLFTLNFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESMEE 180

Query: 181 FAIVVVNGLGIVRDLKHMARFCEGLEDKKLGLQRLGYLHNQKRFGSKHNAGSDSLLTASA 238
           FA +V  G+G+VRDLK +AR+CEGLE  ++GL+RLG L  +KRFG KH+AGSDSLLTA  
Sbjct: 181 FAEMVARGVGVVRDLKEVARWCEGLEQGRVGLERLGELLGEKRFGMKHHAGSDSLLTAFV 240

[Close]

BLAST of Bhi03G001833 vs. NCBI nr
Match: XP_023533171.1 (putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 260.8 bits (665), Expect = 4.6e-66
Identity = 140/262 (53.44%), Postives = 177/262 (67.56%), Query Frame = 0


Query: 1   MGRRNRARSRRE-PLIRQVWVSNFDSKISKFDECLRSHSILSIDTEFAGFIRKSPRGLIE 60
           MGRRNRAR RR  P I++VW SNFD +I + + CL+++ ILSIDTEF G IR +P G I+
Sbjct: 1   MGRRNRARPRRRTPSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSID 60

Query: 61  EAIYDDFRFNVNQMKLIQLCITTCDDSGS---------------------SFVSFLEQND 120
           E +Y+D RFNVNQ KLIQL +T  D+SG                      S +SFLEQN 
Sbjct: 61  ERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSDFDHQIDTQNPSSISFLEQNG 120

Query: 121 IDLKKLKKDGMPIRLF-VAFLPIIRKHNVFRWVTFHELYDIGYLIKAMGLITVFPESMEE 180
           +D  KLKK G+P+ LF + F  IIR+  V +WVTFH LYDIGYL+KAMG+    PESMEE
Sbjct: 121 LDFAKLKKQGIPLSLFTLKFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESMEE 180

Query: 181 FAIVVVNGLGIVRDLKHMARFCEGLEDKKLGLQRLGYLHNQKRFGSKHNAGSDSLLTASA 236
           FA +V  G+G+VRDLK +AR+CEGLE  K+GL+RLG L  +KRFG KH+AGSDSLLTA  
Sbjct: 181 FAEMVARGVGVVRDLKEVARWCEGLEQGKVGLERLGELLGEKRFGMKHHAGSDSLLTAFV 240

[Close]

BLAST of Bhi03G001833 vs. NCBI nr
Match: XP_023533172.1 (putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 258.5 bits (659), Expect = 2.3e-65
Identity = 131/259 (50.58%), Postives = 174/259 (67.18%), Query Frame = 0


Query: 1   MGRRNRARSRREPLIRQVWVSNFDSKISKFDECLRSHSILSIDTEFAGFIRKSPRGLIEE 60
           M R  R      PLIR+VW  N D +I + D CL S+S++SIDTEF G I+++P G I+E
Sbjct: 1   MDRIVRGPRGDNPLIREVWAYNLDHEIIRLDRCLLSYSVMSIDTEFPGCIKRTPWGTIDE 60

Query: 61  AIYDDFRFNVNQMKLIQLCITTCDDSGS---------------------SFVSFLEQNDI 120
            +Y DFRFNVNQ K+IQL +T  D+ G+                     + + FL+QN +
Sbjct: 61  ELYADFRFNVNQTKVIQLGVTVSDEVGNIGGTWEFNFSDFDPEIDAHNPASICFLKQNGL 120

Query: 121 DLKKLKKDGMPIRLF-VAFLPIIRKHNVFRWVTFHELYDIGYLIKAMGLITVFPESMEEF 180
           D  KLKKDG+ +R F + FL  IRKH ++RWVTFH LYDIGYL+ AMG++   PE++ EF
Sbjct: 121 DFGKLKKDGIQVRKFAIRFLYTIRKHAIYRWVTFHGLYDIGYLMLAMGVVKSLPETLGEF 180

Query: 181 AIVVVNGLGIVRDLKHMARFCEGLEDKKLGLQRLGYLHNQKRFGSKHNAGSDSLLTASAH 238
             +V   +G VRDLKHMARFCEGLE   LGL++LG L +QKRFG KH+AGSDSL+TA  H
Sbjct: 181 EWIVARRVGTVRDLKHMARFCEGLEGGNLGLEKLGQLLDQKRFGLKHHAGSDSLMTALLH 240

The following BLAST results are available for this feature:

BLAST of Bhi03G001833 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O64773\|CAF1E_ARATH	3.2e-26	35.75	Probable CCR4-associated factor 1 homolog 5 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
sp\|Q9LXM4\|CAF1H_ARATH	3.2e-26	34.98	Putative CCR4-associated factor 1 homolog 8 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
sp\|Q9SHJ0\|CAF1A_ARATH	1.2e-25	32.00	Probable CCR4-associated factor 1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
sp\|Q9SFX6\|CAF1C_ARATH	7.9e-25	35.59	Putative CCR4-associated factor 1 homolog 3 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
sp\|Q9C6M9\|CAF1D_ARATH	7.9e-25	35.59	Putative CCR4-associated factor 1 homolog 4 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]

BLAST of Bhi03G001833 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G61470.1	1.8e-27	35.75	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT3G44240.1	1.8e-27	34.98	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G06450.1	6.8e-27	32.00	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G27890.1	4.4e-26	35.59	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G27820.1	4.4e-26	35.59	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

BLAST of Bhi03G001833 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LPP0\|A0A0A0LPP0_CUCSA	7.8e-86	65.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G270190 PE=4 SV=1	[more]
tr\|A0A1S3BY95\|A0A1S3BY95_CUCME	6.5e-40	39.92	putative CCR4-associated factor 1 homolog 8 OS=Cucumis melo OX=3656 GN=LOC103494...	[more]
tr\|A0A1S4E611\|A0A1S4E611_CUCME	2.5e-39	58.82	putative CCR4-associated factor 1 homolog 8 OS=Cucumis melo OX=3656 GN=LOC107992...	[more]
tr\|V4TLB7\|V4TLB7_9ROSI	5.7e-36	38.21	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10016106mg PE=4 ...	[more]
tr\|A0A2H5PHB6\|A0A2H5PHB6_CITUN	9.6e-36	38.21	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_136660 PE=4 SV=1	[more]

BLAST of Bhi03G001833 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147072.1	1.2e-85	65.78	PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis sativus] >KGN619...	[more]
XP_022146113.1	2.9e-68	55.17	putative CCR4-associated factor 1 homolog 8 [Momordica charantia]	[more]
XP_022947867.1	1.2e-66	53.46	putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]	[more]
XP_023533171.1	4.6e-66	53.44	putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo]	[more]
XP_023533172.1	2.3e-65	50.58	putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR012337	RNaseH-like_sf
IPR036397	RNaseH_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043928	exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay
biological_process	GO:0017148	negative regulation of translation
cellular_component	GO:0030015	CCR4-NOT core complex
cellular_component	GO:0000932	cytoplasmic mRNA processing body
cellular_component	GO:0016020	membrane
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004535	poly(A)-specific ribonuclease activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi03M001833	Bhi03M001833	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	G3DSA:3.30.420.10		coord: 90..239 e-value: 1.4E-26 score: 95.3
IPR036397	Ribonuclease H superfamily	GENE3D	G3DSA:3.30.420.10		coord: 4..89 e-value: 1.0E-16 score: 62.8
None	No IPR available	PANTHER	PTHR10797:SF16	CCR4-ASSOCIATED FACTOR 1 HOMOLOG 1-RELATED	coord: 91..237 coord: 13..88
None	No IPR available	PANTHER	PTHR10797	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT	coord: 91..237 coord: 13..88
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	SSF53098	Ribonuclease H-like	coord: 10..225

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi03G001833	Cucurbita maxima (Rimu)	cmawgoB1071
Bhi03G001833	Cucurbita moschata (Rifu)	cmowgoB0791
Bhi03G001833	Cucurbita moschata (Rifu)	cmowgoB1064
Bhi03G001833	Cucurbita pepo (Zucchini)	cpewgoB0085
Bhi03G001833	Cucurbita pepo (Zucchini)	cpewgoB0598
Bhi03G001833	Wild cucumber (PI 183967)	cpiwgoB408
Bhi03G001833	Cucumber (Chinese Long) v3	cucwgoB410
Bhi03G001833	Cucumber (Chinese Long) v2	cuwgoB406
Bhi03G001833	Bottle gourd (USVL1VR-Ls)	lsiwgoB169
Bhi03G001833	Melon (DHL92) v3.6.1	medwgoB659
Bhi03G001833	Melon (DHL92) v3.5.1	mewgoB652
Bhi03G001833	Watermelon (Charleston Gray)	wcgwgoB384
Bhi03G001833	Watermelon (97103) v2	wgowmbB424
Bhi03G001833	Watermelon (97103) v1	wgowmB439
Bhi03G001833	Silver-seed gourd	carwgoB0372
Bhi03G001833	Silver-seed gourd	carwgoB0747
Bhi03G001833	Cucurbita maxima (Rimu)	cmawgoB0799
Bhi03G001833	Cucumber (Gy14) v1	cgywgoB695
Bhi03G001833	Cucumber (Gy14) v2	cgybwgoB387