Bhi03G001816 (gene) Wax gourd

NameBhi03G001816
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionS-acyltransferase
Locationchr3 : 50276038 .. 50276720 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCTTTCATTCCCGGGACCGCGCCTCGTCTATGTACTCGGCGCCTCTCTTGAAGATGTGCGCGCGATATGAGAAAAAAAGAACCTATTGGTTGGGAGGAACCAATGAAAAGCAGGGTAGAGCCTCGGAGCCGGCCCAAGCAAAGATCGGCACTCGAAGGCTTGAGGAGCTGCCCGCAAAAAGGAAAACCGTGGGAGACGGTAGACTCGCCAGTCAGGCACACCGTGAGGCTGACTATAGCAGACCGGGAGGTTACAATTCCTGTTTTCCTATTTCAATTTCAGGGAGTGAATGTAGGAAGTTCAGACGGTGGATCAGGTTATGAAGATTCAACAAAAGACGTCTTGGGGATCGGCAATAGCTAAGCATTGTGGCCATCACAGTTCAAGCTACGTATGGCTGGCGCACAACCTACGGGCTTCTTAGCCAAAAGAAAAAAAAAAGGATGCCATGCCTCTAATCTAAAGCTTTAGTCTAATCTTAGACAAAGAGCAAGGAGGATATGAAGCACTGTTGGGTAGACCATGGCTCAAACCAGAGTGGTTCATGACTGGGCTAATAAAAAACGGTCTCAAGCAGGGAAACGCGGGATGGAAGGCGAGGGAAAAGGCTTGGCTTTGTTTCACAGAAAAAGGACTAAGGAAATTTTGTTTCCGTAGTGGTGATGCAGGCGTCAGTTGA

mRNA sequence

ATGGGCTTTCATTCCCGGGACCGCGCCTCGTCTATGTACTCGGCGCCTCTCTTGAAGATGTGCGCGCGATATGAGAAAAAAAGAACCTATTGGTTGGGAGGAACCAATGAAAAGCAGGGTAGAGCCTCGGAGCCGGCCCAAGCAAAGATCGGCACTCGAAGGCTTGAGGAGCTGCCCGCAAAAAGGAAAACCGTGGGAGACGGTAGACTCGCCAGTCAGGCACACCGTGAGGCTGACTATAGCAGACCGGGAGACAAAGAGCAAGGAGGATATGAAGCACTGTTGGGTAGACCATGGCTCAAACCAGAGTGGTTCATGACTGGGCTAATAAAAAACGGTCTCAAGCAGGGAAACGCGGGATGGAAGGCGAGGGAAAAGGCTTGGCTTTGTTTCACAGAAAAAGGACTAAGGAAATTTTGTTTCCGTAGTGGTGATGCAGGCGTCAGTTGA

Coding sequence (CDS)

ATGGGCTTTCATTCCCGGGACCGCGCCTCGTCTATGTACTCGGCGCCTCTCTTGAAGATGTGCGCGCGATATGAGAAAAAAAGAACCTATTGGTTGGGAGGAACCAATGAAAAGCAGGGTAGAGCCTCGGAGCCGGCCCAAGCAAAGATCGGCACTCGAAGGCTTGAGGAGCTGCCCGCAAAAAGGAAAACCGTGGGAGACGGTAGACTCGCCAGTCAGGCACACCGTGAGGCTGACTATAGCAGACCGGGAGACAAAGAGCAAGGAGGATATGAAGCACTGTTGGGTAGACCATGGCTCAAACCAGAGTGGTTCATGACTGGGCTAATAAAAAACGGTCTCAAGCAGGGAAACGCGGGATGGAAGGCGAGGGAAAAGGCTTGGCTTTGTTTCACAGAAAAAGGACTAAGGAAATTTTGTTTCCGTAGTGGTGATGCAGGCGTCAGTTGA

Protein sequence

MGFHSRDRASSMYSAPLLKMCARYEKKRTYWLGGTNEKQGRASEPAQAKIGTRRLEELPAKRKTVGDGRLASQAHREADYSRPGDKEQGGYEALLGRPWLKPEWFMTGLIKNGLKQGNAGWKAREKAWLCFTEKGLRKFCFRSGDAGVS
BLAST of Bhi03G001816 vs. TrEMBL
Match: tr|A0A2J6KAW2|A0A2J6KAW2_LACSA (S-acyltransferase OS=Lactuca sativa OX=4236 GN=LSAT_7X43100 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.6e-04
Identity = 37/63 (58.73%), Postives = 39/63 (61.90%), Query Frame = 0

Query: 9  ASSMYSA--PLLKMCARYEKKRTYWLGGTNEK----QGRASEPAQAKIGTRRLEELPAKR 66
          A SMYS   P+   CARY+K       G  EK    QGRASEPAQAKIGTRRLEE P K 
Sbjct: 31 APSMYSGPPPIAGRCARYDK-------GPWEKPMKSQGRASEPAQAKIGTRRLEEQPEKG 86

BLAST of Bhi03G001816 vs. NCBI nr
Match: PLY72224.1 (hypothetical protein LSAT_7X43100 [Lactuca sativa])

HSP 1 Score: 53.9 bits (128), Expect = 5.4e-04
Identity = 37/63 (58.73%), Postives = 39/63 (61.90%), Query Frame = 0

Query: 9  ASSMYSA--PLLKMCARYEKKRTYWLGGTNEK----QGRASEPAQAKIGTRRLEELPAKR 66
          A SMYS   P+   CARY+K       G  EK    QGRASEPAQAKIGTRRLEE P K 
Sbjct: 31 APSMYSGPPPIAGRCARYDK-------GPWEKPMKSQGRASEPAQAKIGTRRLEEQPEKG 86

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A2J6KAW2|A0A2J6KAW2_LACSA3.6e-0458.73S-acyltransferase OS=Lactuca sativa OX=4236 GN=LSAT_7X43100 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
PLY72224.15.4e-0458.73hypothetical protein LSAT_7X43100 [Lactuca sativa][more]

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi03M001816Bhi03M001816mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..89

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None