Bhi03G001811 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi03G001811
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Unknown protein
Location	chr3 : 50255764 .. 50256306 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAACGAATCTACAGGGCTATCACTTCTTTGGCCAGATCTTCCAACCTTTTCACAATTACAGTTCACTGCGCCCTTTACCTCGTAAACTCGGTAAAGCGCTTGCTGGTTTTTCCATCATCCAATCCACAACAAATCGAATGAAACCTGGCGAAAAAGAAGTTCACACTTTGCTGAGGAACGAAGCTTCGTGTTTGTTTTTCTTCAAACCCCCAATCCGCTCTCGCTCGCCGCTACTAACGGGGTCTCGGTTGATTTCCCTTCCTTTAGCTACTCAGATGTTTCAGTTCGCTAAGTTTGAAAAGTCCAAAGAGCGCAGACTAGCCACGGAGCTTGGATACGGTTTCCCGATCGGAGATCCATGGATCACAGACGGTATCTCCCCATGGCCTTTCGCCTCTAGCGTCCTTCCTTCTCAATGCCCGGGCATCCATCCAATGCATTCTTTTCGATCTTGTACTGACGGTACACGGAACACCAACCCAATCTCGAAATACTCACTGATGATAGGGATTGCAACTACATCAAAAACCGCGACGTGA

mRNA sequence

ATGGGAACGAATCTACAGGGCTATCACTTCTTTGGCCAGATCTTCCAACCTTTTCACAATTACAGTTCACTGCGCCCTTTACCTCGTAAACTCGGTAAAGCGCTTGCTGGTTTTTCCATCATCCAATCCACAACAAATCGAATGAAACCTGGCGAAAAAGAAGTTCACACTTTGCTGAGGAACGAAGCTTCGTGTTTGTTTTTCTTCAAACCCCCAATCCGCTCTCGCTCGCCGCTACTAACGGGGTCTCGGTTGATTTCCCTTCCTTTAGCTACTCAGATGTTTCAGTTCGCTAAGTTTGAAAAGTCCAAAGAGCGCAGACTAGCCACGGAGCTTGGATACGGTTTCCCGATCGGAGATCCATGGATCACAGACGGTATCTCCCCATGGCCTTTCGCCTCTAGCGTCCTTCCTTCTCAATGCCCGGGCATCCATCCAATGCATTCTTTTCGATCTTGTACTGACGGTACACGGAACACCAACCCAATCTCGAAATACTCACTGATGATAGGGATTGCAACTACATCAAAAACCGCGACGTGA

Coding sequence (CDS)

ATGGGAACGAATCTACAGGGCTATCACTTCTTTGGCCAGATCTTCCAACCTTTTCACAATTACAGTTCACTGCGCCCTTTACCTCGTAAACTCGGTAAAGCGCTTGCTGGTTTTTCCATCATCCAATCCACAACAAATCGAATGAAACCTGGCGAAAAAGAAGTTCACACTTTGCTGAGGAACGAAGCTTCGTGTTTGTTTTTCTTCAAACCCCCAATCCGCTCTCGCTCGCCGCTACTAACGGGGTCTCGGTTGATTTCCCTTCCTTTAGCTACTCAGATGTTTCAGTTCGCTAAGTTTGAAAAGTCCAAAGAGCGCAGACTAGCCACGGAGCTTGGATACGGTTTCCCGATCGGAGATCCATGGATCACAGACGGTATCTCCCCATGGCCTTTCGCCTCTAGCGTCCTTCCTTCTCAATGCCCGGGCATCCATCCAATGCATTCTTTTCGATCTTGTACTGACGGTACACGGAACACCAACCCAATCTCGAAATACTCACTGATGATAGGGATTGCAACTACATCAAAAACCGCGACGTGA

Protein sequence

MGTNLQGYHFFGQIFQPFHNYSSLRPLPRKLGKALAGFSIIQSTTNRMKPGEKEVHTLLRNEASCLFFFKPPIRSRSPLLTGSRLISLPLATQMFQFAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASSVLPSQCPGIHPMHSFRSCTDGTRNTNPISKYSLMIGIATTSKTAT

Homology

[Close]

BLAST of Bhi03G001811 vs. Swiss-Prot
Match: sp|P93276|M030_ARATH (Uncharacterized mitochondrial protein AtMg00030 OS=Arabidopsis thaliana OX=3702 GN=AtMg00030 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.3e-32
Identity = 66/72 (91.67%), Postives = 66/72 (91.67%), Query Frame = 0


Query: 94  MFQFAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFAS-SVLPSQCPGIHPMHSFRS 153
           MFQFAKF KSKERRLATELGYGFPIGDPWITDGISPWPFAS SVLPSQCPGIHPMHSFRS
Sbjct: 1   MFQFAKFSKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMHSFRS 60

Query: 154 CTDGTRNTNPIS 165
           CT GT NT  IS
Sbjct: 61  CTQGTLNTTKIS 72

[Close]

BLAST of Bhi03G001811 vs. TAIR10
Match: ATMG00030.1 (hypothetical protein)

HSP 1 Score: 141.0 bits (354), Expect = 7.3e-34
Identity = 66/72 (91.67%), Postives = 66/72 (91.67%), Query Frame = 0


Query: 94  MFQFAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFAS-SVLPSQCPGIHPMHSFRS 153
           MFQFAKF KSKERRLATELGYGFPIGDPWITDGISPWPFAS SVLPSQCPGIHPMHSFRS
Sbjct: 1   MFQFAKFSKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMHSFRS 60

Query: 154 CTDGTRNTNPIS 165
           CT GT NT  IS
Sbjct: 61  CTQGTLNTTKIS 72

[Close]

BLAST of Bhi03G001811 vs. TrEMBL
Match: tr|A0A161X3X2|A0A161X3X2_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_024277 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 6.5e-53
Identity = 104/108 (96.30%), Postives = 105/108 (97.22%), Query Frame = 0


Query: 48  MKPGEKEVHTLLRNEASCLFFFKPPIRSRSPLLTGSRLISLPLATQMFQFAKFEKSKERR 107
           MKPGEK V+TLLRNEASCLFFFKPPIRSRSPLLT SRLISLPLATQMFQFAKFEKSKERR
Sbjct: 1   MKPGEKAVNTLLRNEASCLFFFKPPIRSRSPLLTESRLISLPLATQMFQFAKFEKSKERR 60

Query: 108 LATELGYGFPIGDPWITDGISPWPFAS-SVLPSQCPGIHPMHSFRSCT 155
           LATELGYGFPIGDPWITDGISPWPFAS SVLPSQCPGIHPMHSFRSCT
Sbjct: 61  LATELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMHSFRSCT 108

[Close]

BLAST of Bhi03G001811 vs. TrEMBL
Match: tr|A0A2J6KHB6|A0A2J6KHB6_LACSA (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_7X25421 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 8.5e-53
Identity = 104/110 (94.55%), Postives = 106/110 (96.36%), Query Frame = 0


Query: 48  MKPGEKEVHTLLRNEASCLFFFKPPIRSRSPLLTGSRLISLPLATQMFQFAKFEKSKERR 107
           MKPGEKE++TLLRNEAS LFFFK PIRSRSPLLTGSRLISLPLATQMFQFAKFEKSKERR
Sbjct: 1   MKPGEKEMNTLLRNEASSLFFFKAPIRSRSPLLTGSRLISLPLATQMFQFAKFEKSKERR 60

Query: 108 LATELGYGFPIGDPWITDGISPWPFAS-SVLPSQCPGIHPMHSFRSCTDG 157
           LATELGYGFPIGDPWITDGISPWPFAS SVLPSQCPGIHPMHSFRSCT G
Sbjct: 61  LATELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMHSFRSCTHG 110

[Close]

BLAST of Bhi03G001811 vs. TrEMBL
Match: tr|A0A1J6IZR2|A0A1J6IZR2_NICAT (Putative mitochondrial protein (Fragment) OS=Nicotiana attenuata OX=49451 GN=A4A49_59948 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 2.5e-52
Identity = 102/108 (94.44%), Postives = 105/108 (97.22%), Query Frame = 0


Query: 48  MKPGEKEVHTLLRNEASCLFFFKPPIRSRSPLLTGSRLISLPLATQMFQFAKFEKSKERR 107
           MKPGEKEV+TLLRN+ASCLFFFKPPIRSRSPLLTGSRLISLPLAT+MFQFAKFEKSKE R
Sbjct: 1   MKPGEKEVNTLLRNKASCLFFFKPPIRSRSPLLTGSRLISLPLATKMFQFAKFEKSKEHR 60

Query: 108 LATELGYGFPIGDPWITDGISPWPFAS-SVLPSQCPGIHPMHSFRSCT 155
           LATELGYGFPIGDPWI DGISPWPFAS SVLPSQCPGIHPMHSFRSCT
Sbjct: 61  LATELGYGFPIGDPWIIDGISPWPFASESVLPSQCPGIHPMHSFRSCT 108

[Close]

BLAST of Bhi03G001811 vs. TrEMBL
Match: tr|A0A2U1NK03|A0A2U1NK03_ARTAN (Uncharacterized protein OS=Artemisia annua OX=35608 GN=CTI12_AA257850 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 3.2e-52
Identity = 103/112 (91.96%), Postives = 106/112 (94.64%), Query Frame = 0


Query: 48  MKPGEKEVHTLLRNEASCLFFFKPPIRSRSPLLTGSRLISLPLATQMFQFAKFEKSKERR 107
           MKPGEKE++TLLRNEAS LFFFK PIRSRSPLLTGSRLISLPLATQMFQFAKF KSKERR
Sbjct: 1   MKPGEKEMNTLLRNEASSLFFFKAPIRSRSPLLTGSRLISLPLATQMFQFAKFAKSKERR 60

Query: 108 LATELGYGFPIGDPWITDGISPWPFAS-SVLPSQCPGIHPMHSFRSCTDGTR 159
           LATELGYGFPIGDPWITDGISPWPFAS SVLPSQCPGIHPMHSFRSCT G +
Sbjct: 61  LATELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMHSFRSCTHGAK 112

[Close]

BLAST of Bhi03G001811 vs. TrEMBL
Match: tr|A0A1J6IE49|A0A1J6IE49_NICAT (Putative mitochondrial protein OS=Nicotiana attenuata OX=49451 GN=A4A49_29225 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 3.2e-52
Identity = 103/108 (95.37%), Postives = 105/108 (97.22%), Query Frame = 0


Query: 48  MKPGEKEVHTLLRNEASCLFFFKPPIRSRSPLLTGSRLISLPLATQMFQFAKFEKSKERR 107
           MK GEKEV+TLLRNEASCLFFFKPPIRSRSPLLTGSRLISLPLA +MFQFAKFEKSKERR
Sbjct: 1   MKLGEKEVNTLLRNEASCLFFFKPPIRSRSPLLTGSRLISLPLAIKMFQFAKFEKSKERR 60

Query: 108 LATELGYGFPIGDPWITDGISPWPFAS-SVLPSQCPGIHPMHSFRSCT 155
           LATELGYGFPIGDPWITDGISPWPFAS SVLPSQCPGIHPMHSFRSCT
Sbjct: 61  LATELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMHSFRSCT 108

[Close]

BLAST of Bhi03G001811 vs. NCBI nr
Match: KZM80319.1 (hypothetical protein DCAR_031801 [Daucus carota subsp. sativus] >KZM87143.1 hypothetical protein DCAR_024277 [Daucus carota subsp. sativus])

HSP 1 Score: 216.1 bits (549), Expect = 9.9e-53
Identity = 104/108 (96.30%), Postives = 105/108 (97.22%), Query Frame = 0


Query: 48  MKPGEKEVHTLLRNEASCLFFFKPPIRSRSPLLTGSRLISLPLATQMFQFAKFEKSKERR 107
           MKPGEK V+TLLRNEASCLFFFKPPIRSRSPLLT SRLISLPLATQMFQFAKFEKSKERR
Sbjct: 1   MKPGEKAVNTLLRNEASCLFFFKPPIRSRSPLLTESRLISLPLATQMFQFAKFEKSKERR 60

Query: 108 LATELGYGFPIGDPWITDGISPWPFAS-SVLPSQCPGIHPMHSFRSCT 155
           LATELGYGFPIGDPWITDGISPWPFAS SVLPSQCPGIHPMHSFRSCT
Sbjct: 61  LATELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMHSFRSCT 108

[Close]

BLAST of Bhi03G001811 vs. NCBI nr
Match: PLY74452.1 (hypothetical protein LSAT_7X25421 [Lactuca sativa])

HSP 1 Score: 215.7 bits (548), Expect = 1.3e-52
Identity = 104/110 (94.55%), Postives = 106/110 (96.36%), Query Frame = 0


Query: 48  MKPGEKEVHTLLRNEASCLFFFKPPIRSRSPLLTGSRLISLPLATQMFQFAKFEKSKERR 107
           MKPGEKE++TLLRNEAS LFFFK PIRSRSPLLTGSRLISLPLATQMFQFAKFEKSKERR
Sbjct: 1   MKPGEKEMNTLLRNEASSLFFFKAPIRSRSPLLTGSRLISLPLATQMFQFAKFEKSKERR 60

Query: 108 LATELGYGFPIGDPWITDGISPWPFAS-SVLPSQCPGIHPMHSFRSCTDG 157
           LATELGYGFPIGDPWITDGISPWPFAS SVLPSQCPGIHPMHSFRSCT G
Sbjct: 61  LATELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMHSFRSCTHG 110

[Close]

BLAST of Bhi03G001811 vs. NCBI nr
Match: OIT00553.1 (putative mitochondrial protein, partial [Nicotiana attenuata])

HSP 1 Score: 214.2 bits (544), Expect = 3.8e-52
Identity = 102/108 (94.44%), Postives = 105/108 (97.22%), Query Frame = 0


Query: 48  MKPGEKEVHTLLRNEASCLFFFKPPIRSRSPLLTGSRLISLPLATQMFQFAKFEKSKERR 107
           MKPGEKEV+TLLRN+ASCLFFFKPPIRSRSPLLTGSRLISLPLAT+MFQFAKFEKSKE R
Sbjct: 1   MKPGEKEVNTLLRNKASCLFFFKPPIRSRSPLLTGSRLISLPLATKMFQFAKFEKSKEHR 60

Query: 108 LATELGYGFPIGDPWITDGISPWPFAS-SVLPSQCPGIHPMHSFRSCT 155
           LATELGYGFPIGDPWI DGISPWPFAS SVLPSQCPGIHPMHSFRSCT
Sbjct: 61  LATELGYGFPIGDPWIIDGISPWPFASESVLPSQCPGIHPMHSFRSCT 108

[Close]

BLAST of Bhi03G001811 vs. NCBI nr
Match: OIT03333.1 (putative mitochondrial protein [Nicotiana attenuata])

HSP 1 Score: 213.8 bits (543), Expect = 4.9e-52
Identity = 103/108 (95.37%), Postives = 105/108 (97.22%), Query Frame = 0


Query: 48  MKPGEKEVHTLLRNEASCLFFFKPPIRSRSPLLTGSRLISLPLATQMFQFAKFEKSKERR 107
           MK GEKEV+TLLRNEASCLFFFKPPIRSRSPLLTGSRLISLPLA +MFQFAKFEKSKERR
Sbjct: 1   MKLGEKEVNTLLRNEASCLFFFKPPIRSRSPLLTGSRLISLPLAIKMFQFAKFEKSKERR 60

Query: 108 LATELGYGFPIGDPWITDGISPWPFAS-SVLPSQCPGIHPMHSFRSCT 155
           LATELGYGFPIGDPWITDGISPWPFAS SVLPSQCPGIHPMHSFRSCT
Sbjct: 61  LATELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMHSFRSCT 108

[Close]

BLAST of Bhi03G001811 vs. NCBI nr
Match: OIT35639.1 (putative mitochondrial protein, partial [Nicotiana attenuata])

HSP 1 Score: 213.8 bits (543), Expect = 4.9e-52
Identity = 102/108 (94.44%), Postives = 106/108 (98.15%), Query Frame = 0


Query: 48  MKPGEKEVHTLLRNEASCLFFFKPPIRSRSPLLTGSRLISLPLATQMFQFAKFEKSKERR 107
           MKPGEKEV+TLLRNEASCLFFFKPPIRSRSPLLTGSRLISLPLAT+MFQFAKFEKSKERR
Sbjct: 1   MKPGEKEVNTLLRNEASCLFFFKPPIRSRSPLLTGSRLISLPLATKMFQFAKFEKSKERR 60

Query: 108 LATELGYGFPIGDPWITDGISPWPFAS-SVLPSQCPGIHPMHSFRSCT 155
           LATELGYGFPIGDPWIT+GISPWPFAS +VLPSQCPGIH MHSFRSCT
Sbjct: 61  LATELGYGFPIGDPWITNGISPWPFASKNVLPSQCPGIHAMHSFRSCT 108

The following BLAST results are available for this feature:

BLAST of Bhi03G001811 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P93276\|M030_ARATH	1.3e-32	91.67	Uncharacterized mitochondrial protein AtMg00030 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Bhi03G001811 vs. TAIR10


Match Name	E-value	Identity	Description
ATMG00030.1	7.3e-34	91.67	hypothetical protein	[more]

BLAST of Bhi03G001811 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A161X3X2\|A0A161X3X2_DAUCA	6.5e-53	96.30	Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_024277 ...	[more]
tr\|A0A2J6KHB6\|A0A2J6KHB6_LACSA	8.5e-53	94.55	Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_7X25421 PE=4 SV=1	[more]
tr\|A0A1J6IZR2\|A0A1J6IZR2_NICAT	2.5e-52	94.44	Putative mitochondrial protein (Fragment) OS=Nicotiana attenuata OX=49451 GN=A4A...	[more]
tr\|A0A2U1NK03\|A0A2U1NK03_ARTAN	3.2e-52	91.96	Uncharacterized protein OS=Artemisia annua OX=35608 GN=CTI12_AA257850 PE=4 SV=1	[more]
tr\|A0A1J6IE49\|A0A1J6IE49_NICAT	3.2e-52	95.37	Putative mitochondrial protein OS=Nicotiana attenuata OX=49451 GN=A4A49_29225 PE...	[more]

BLAST of Bhi03G001811 vs. NCBI nr


Match Name	E-value	Identity	Description
KZM80319.1	9.9e-53	96.30	hypothetical protein DCAR_031801 [Daucus carota subsp. sativus] >KZM87143.1 hypo...	[more]
PLY74452.1	1.3e-52	94.55	hypothetical protein LSAT_7X25421 [Lactuca sativa]	[more]
OIT00553.1	3.8e-52	94.44	putative mitochondrial protein, partial [Nicotiana attenuata]	[more]
OIT03333.1	4.9e-52	95.37	putative mitochondrial protein [Nicotiana attenuata]	[more]
OIT35639.1	4.9e-52	94.44	putative mitochondrial protein, partial [Nicotiana attenuata]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005524	ATP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi03M001811	Bhi03M001811	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37773	FAMILY NOT NAMED	coord: 94..156

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi03G001811	Wild cucumber (PI 183967)	cpiwgoB408
Bhi03G001811	Cucumber (Chinese Long) v3	cucwgoB410
Bhi03G001811	Cucumber (Chinese Long) v2	cuwgoB406
Bhi03G001811	Bottle gourd (USVL1VR-Ls)	lsiwgoB169
Bhi03G001811	Melon (DHL92) v3.6.1	medwgoB659
Bhi03G001811	Melon (DHL92) v3.5.1	mewgoB652
Bhi03G001811	Watermelon (Charleston Gray)	wcgwgoB384
Bhi03G001811	Watermelon (97103) v2	wgowmbB424
Bhi03G001811	Watermelon (97103) v1	wgowmB439
Bhi03G001811	Silver-seed gourd	carwgoB0372
Bhi03G001811	Silver-seed gourd	carwgoB0747
Bhi03G001811	Cucurbita maxima (Rimu)	cmawgoB0799
Bhi03G001811	Cucumber (Gy14) v1	cgywgoB011
Bhi03G001811	Cucumber (Gy14) v2	cgybwgoB387
Bhi03G001811	Cucurbita maxima (Rimu)	cmawgoB1071
Bhi03G001811	Cucurbita moschata (Rifu)	cmowgoB0791
Bhi03G001811	Cucurbita moschata (Rifu)	cmowgoB1064
Bhi03G001811	Cucurbita pepo (Zucchini)	cpewgoB0085
Bhi03G001811	Cucurbita pepo (Zucchini)	cpewgoB0598