Bhi03G001634 (gene) Wax gourd

NameBhi03G001634
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr3 : 45000562 .. 45000864 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCATATGAAGAAACCCAATCCTCAGAAACTCAAGCCCAGATAAAAACATCCTTTTTGGCTCCTTATTCCGTTATTGCAACAAATGGCTCCTCCTTTGGTCACCCTCTTGAGACTGTGCTAATAATGAAGTTAGATGATAAAAATTGTGCCTTGTGGAACGGAATGATTCTTGGCATTCTTCATGGACAGAAGCTTCAAGGACATGTCCTTGGAACCAAGTCAGAGCCACCAGTTCCTCTTCCTTCAATGAGAGGAACAGGGACCTCAGAACCCTTAACCGATCCAGTTTATGAAGCATGA

mRNA sequence

ATGTCATATGAAGAAACCCAATCCTCAGAAACTCAAGCCCAGATAAAAACATCCTTTTTGGCTCCTTATTCCGTTATTGCAACAAATGGCTCCTCCTTTGGTCACCCTCTTGAGACTGTGCTAATAATGAAGTTAGATGATAAAAATTGTGCCTTGTGGAACGGAATGATTCTTGGCATTCTTCATGGACAGAAGCTTCAAGGACATGTCCTTGGAACCAAGTCAGAGCCACCAGTTCCTCTTCCTTCAATGAGAGGAACAGGGACCTCAGAACCCTTAACCGATCCAGTTTATGAAGCATGA

Coding sequence (CDS)

ATGTCATATGAAGAAACCCAATCCTCAGAAACTCAAGCCCAGATAAAAACATCCTTTTTGGCTCCTTATTCCGTTATTGCAACAAATGGCTCCTCCTTTGGTCACCCTCTTGAGACTGTGCTAATAATGAAGTTAGATGATAAAAATTGTGCCTTGTGGAACGGAATGATTCTTGGCATTCTTCATGGACAGAAGCTTCAAGGACATGTCCTTGGAACCAAGTCAGAGCCACCAGTTCCTCTTCCTTCAATGAGAGGAACAGGGACCTCAGAACCCTTAACCGATCCAGTTTATGAAGCATGA

Protein sequence

MSYEETQSSETQAQIKTSFLAPYSVIATNGSSFGHPLETVLIMKLDDKNCALWNGMILGILHGQKLQGHVLGTKSEPPVPLPSMRGTGTSEPLTDPVYEA
BLAST of Bhi03G001634 vs. TrEMBL
Match: tr|A0A0A0LXU0|A0A0A0LXU0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G477520 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.2e-10
Identity = 39/77 (50.65%), Postives = 52/77 (67.53%), Query Frame = 0

Query: 8  SSETQAQIKTSFLAP-YSVIATNGSSFGHPLETVLIMKLDDKNCALWNGMILGILHGQKL 67
          ++ T+ Q  +  +AP Y+ I T   SFGHPL+T L +KLDDK   LW GM+L +L GQK+
Sbjct: 10 NTTTKIQNTSVTIAPTYTAINT---SFGHPLDTSLSIKLDDKKFGLWRGMVLAVLRGQKV 69

Query: 68 QGHVLGTKSEPPVPLPS 84
           G+VLG KS+PP  L S
Sbjct: 70 DGYVLGAKSQPPQSLKS 83

BLAST of Bhi03G001634 vs. NCBI nr
Match: XP_022157748.1 (uncharacterized protein LOC111024384 isoform X1 [Momordica charantia])

HSP 1 Score: 84.0 bits (206), Expect = 3.3e-13
Identity = 47/100 (47.00%), Postives = 63/100 (63.00%), Query Frame = 0

Query: 1   MSYEETQSSETQAQIKTSFLAPYSVIATN-GSSFGHPLETVLIMKLDDKNCALWNGMILG 60
           M+ EET++S    Q+ T+   P    +    +SFGHPL TVL +KLDDKN +LW GM+L 
Sbjct: 1   MTTEETENSSVPPQVVTNVAVPTPNPSPQFNTSFGHPLGTVLTVKLDDKNYSLWRGMVLA 60

Query: 61  ILHGQKLQGHVLGTKSEPPVPLPSMRGTGTSEPL-TDPVY 99
           +L GQK  G+VLGT ++PP  L S    GTS+ L  +P Y
Sbjct: 61  VLRGQKFDGYVLGTLAKPPQFLVSPETEGTSDHLQVNPEY 100

BLAST of Bhi03G001634 vs. NCBI nr
Match: XP_022157750.1 (uncharacterized protein LOC111024384 isoform X2 [Momordica charantia])

HSP 1 Score: 84.0 bits (206), Expect = 3.3e-13
Identity = 47/100 (47.00%), Postives = 63/100 (63.00%), Query Frame = 0

Query: 1   MSYEETQSSETQAQIKTSFLAPYSVIATN-GSSFGHPLETVLIMKLDDKNCALWNGMILG 60
           M+ EET++S    Q+ T+   P    +    +SFGHPL TVL +KLDDKN +LW GM+L 
Sbjct: 1   MTTEETENSSVPPQVVTNVAVPTPNPSPQFNTSFGHPLGTVLTVKLDDKNYSLWRGMVLA 60

Query: 61  ILHGQKLQGHVLGTKSEPPVPLPSMRGTGTSEPL-TDPVY 99
           +L GQK  G+VLGT ++PP  L S    GTS+ L  +P Y
Sbjct: 61  VLRGQKFDGYVLGTLAKPPQFLVSPETEGTSDHLQVNPEY 100

BLAST of Bhi03G001634 vs. NCBI nr
Match: XP_022143579.1 (ankyrin repeat-containing protein NPR4-like [Momordica charantia])

HSP 1 Score: 76.3 bits (186), Expect = 6.8e-11
Identity = 37/76 (48.68%), Postives = 47/76 (61.84%), Query Frame = 0

Query: 24  SVIATNGSSFGHPLETVLIMKLDDKNCALWNGMILGILHGQKLQGHVLGTKSEPPVPLPS 83
           +V +    SFGHPL T L +KLDDKN  LW GM+L +L GQK+ G+VL TK+ P     +
Sbjct: 18  TVFSAINISFGHPLSTALTVKLDDKNYTLWKGMVLAVLPGQKVDGYVLRTKTCPSKYTTT 77

Query: 84  MRGTGTSEPLTDPVYE 100
              TG  EP  +P YE
Sbjct: 78  TSDTGMLEPTLNPAYE 93

BLAST of Bhi03G001634 vs. NCBI nr
Match: KGN65642.1 (hypothetical protein Csa_1G477520 [Cucumis sativus])

HSP 1 Score: 73.9 bits (180), Expect = 3.4e-10
Identity = 39/77 (50.65%), Postives = 52/77 (67.53%), Query Frame = 0

Query: 8  SSETQAQIKTSFLAP-YSVIATNGSSFGHPLETVLIMKLDDKNCALWNGMILGILHGQKL 67
          ++ T+ Q  +  +AP Y+ I T   SFGHPL+T L +KLDDK   LW GM+L +L GQK+
Sbjct: 10 NTTTKIQNTSVTIAPTYTAINT---SFGHPLDTSLSIKLDDKKFGLWRGMVLAVLRGQKV 69

Query: 68 QGHVLGTKSEPPVPLPS 84
           G+VLG KS+PP  L S
Sbjct: 70 DGYVLGAKSQPPQSLKS 83

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LXU0|A0A0A0LXU0_CUCSA2.2e-1050.65Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G477520 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_022157748.13.3e-1347.00uncharacterized protein LOC111024384 isoform X1 [Momordica charantia][more]
XP_022157750.13.3e-1347.00uncharacterized protein LOC111024384 isoform X2 [Momordica charantia][more]
XP_022143579.16.8e-1148.68ankyrin repeat-containing protein NPR4-like [Momordica charantia][more]
KGN65642.13.4e-1050.65hypothetical protein Csa_1G477520 [Cucumis sativus][more]

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi03M001634Bhi03M001634mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..100

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi03G001634Wax gourdwgowgoB013
Bhi03G001634Cucumber (Gy14) v1cgywgoB067
Bhi03G001634Cucumber (Gy14) v1cgywgoB363
Bhi03G001634Cucumber (Gy14) v2cgybwgoB319
Bhi03G001634Cucumber (Gy14) v2cgybwgoB374
Bhi03G001634Cucurbita maxima (Rimu)cmawgoB0354
Bhi03G001634Cucurbita maxima (Rimu)cmawgoB0583
Bhi03G001634Cucurbita maxima (Rimu)cmawgoB1036
Bhi03G001634Cucurbita maxima (Rimu)cmawgoB1059
Bhi03G001634Cucurbita moschata (Rifu)cmowgoB0344
Bhi03G001634Cucurbita moschata (Rifu)cmowgoB0579
Bhi03G001634Cucurbita moschata (Rifu)cmowgoB0791
Bhi03G001634Cucurbita moschata (Rifu)cmowgoB1030
Bhi03G001634Cucurbita moschata (Rifu)cmowgoB1052
Bhi03G001634Cucurbita pepo (Zucchini)cpewgoB0085
Bhi03G001634Cucurbita pepo (Zucchini)cpewgoB0608
Bhi03G001634Cucurbita pepo (Zucchini)cpewgoB0812
Bhi03G001634Cucurbita pepo (Zucchini)cpewgoB1130
Bhi03G001634Wild cucumber (PI 183967)cpiwgoB331
Bhi03G001634Wild cucumber (PI 183967)cpiwgoB395
Bhi03G001634Cucumber (Chinese Long) v3cucwgoB335
Bhi03G001634Cucumber (Chinese Long) v3cucwgoB397
Bhi03G001634Cucumber (Chinese Long) v2cuwgoB328
Bhi03G001634Cucumber (Chinese Long) v2cuwgoB391
Bhi03G001634Bottle gourd (USVL1VR-Ls)lsiwgoB169
Bhi03G001634Bottle gourd (USVL1VR-Ls)lsiwgoB331
Bhi03G001634Melon (DHL92) v3.6.1medwgoB422
Bhi03G001634Melon (DHL92) v3.6.1medwgoB644
Bhi03G001634Melon (DHL92) v3.5.1mewgoB420
Bhi03G001634Melon (DHL92) v3.5.1mewgoB638
Bhi03G001634Watermelon (Charleston Gray)wcgwgoB121
Bhi03G001634Watermelon (Charleston Gray)wcgwgoB337
Bhi03G001634Watermelon (Charleston Gray)wcgwgoB390
Bhi03G001634Watermelon (97103) v2wgowmbB407
Bhi03G001634Watermelon (97103) v2wgowmbB431
Bhi03G001634Watermelon (97103) v2wgowmbB442
Bhi03G001634Watermelon (97103) v1wgowmB408
Bhi03G001634Watermelon (97103) v1wgowmB449
Bhi03G001634Silver-seed gourdcarwgoB0208
Bhi03G001634Silver-seed gourdcarwgoB0666
Bhi03G001634Silver-seed gourdcarwgoB0693
Bhi03G001634Silver-seed gourdcarwgoB1171
Bhi03G001634Cucurbita maxima (Rimu)cmawgoB0799