Bhi03G001468 (gene) Wax gourd

NameBhi03G001468
Typegene
OrganismBenincasa hispida (Wax gourd)
Descriptiondof zinc finger protein DOF5.3-like
Locationchr3 : 39929467 .. 39930199 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGCAGTTATTGGGACAAAGTGGGGCCCTCAGGAACGTTCCCATCGGCGGTGGGTGTCGGAAGAACAAAAGCGCCGCCGCGACGGTGGCGGCTGCTGTAAGGGAAGTCTACAGCTGGAAAAAATGAAAAACTTTATCGTCTTGAGATATTGGGGTCGGTCGGATTCGGAATGGGTCGGAGCGTTGGATCACGAAATAATATCAATCCCCACGCAAAATTCTGTGGGGGTCGCCGGCAAAATTCATCACCTTTTGGCCGTTTTGAGAATCCGCCACCCAAAGCCCTAACGCCTAATAATCTCGCCGCCTCCCAACGTCATAATACGACCCACCGCAGACCACGCTGTTTCAATGCTAAGGACGATGGGTTTGATGAAATTCCGGCGCCGCCACTCAATTTTTTCTTCTCGGGCCTTTGCATCTCTGCTCTTACTGGAGAAACAATCAGACTCAAGTTCATCATCAAACAAAATGGGTATCCTCACGGCGCGTAGGTCAGCTCCACGGCGGCGCCGGGAAATTCAGGGACCCTAATCAGAAGCTTAAATCGTCGTCGAACAATTAATTTCACCGGATGGCCATCAGGGATCCGTGGGAGTAACGAATGTGTTACGACGGCTACGGCAGCGATTTTGGAAGCGGCTCCGGTGGGCGCGGCGAAACGACAGGTTAACTGGAATCCAGCTTTTTCTTGGTCTGATGTTCATGCTAGTGCAATGGAGCATATTTAA

mRNA sequence

ATGTCGCAGTTATTGGGACAAAGTGGGGCCCTCAGGAACGTTCCCATCGGCGGGAAGTCTACAGCTGGAAAAAATGAAAAACTTTATCGTCTTGAGATATTGGGGTCGGTCGGATTCGGAATGGGTCGGAGCGTTGGATCACGAAATAATATCAATCCCCACGCAAAATTCTGTGGGGGTCGCCGGCAAAATTCATCACCTTTTGGCCGTTTTGAGAATCCGCCACCCAAAGCCCTAACGCCTAATAATCTCGCCGCCTCCCAACGTCATAATACGACCCACCGCAGACCACGCTGTTTCAATGCTAAGGACGATGGGTTTGATGAAATTCCGGCGCCGCCACTCAATTTTTTCTTCTCGGGCCTTTGCATCTCTGCTCTTACTGGAGAAACAATCAGACTCAAGTTCATCATCAAACAAAATGGCTCCACGGCGGCGCCGGGAAATTCAGGGACCCTAATCAGAAGCTTAAATCGTCGTCGAACAATTAATTTCACCGGATGGCCATCAGGGATCCGTGGGAGTAACGAATGTGTTACGACGGCTACGGCAGCGATTTTGGAAGCGGCTCCGGTGGGCGCGGCGAAACGACAGGTTAACTGGAATCCAGCTTTTTCTTGGTCTGATGTTCATGCTAGTGCAATGGAGCATATTTAA

Coding sequence (CDS)

ATGTCGCAGTTATTGGGACAAAGTGGGGCCCTCAGGAACGTTCCCATCGGCGGGAAGTCTACAGCTGGAAAAAATGAAAAACTTTATCGTCTTGAGATATTGGGGTCGGTCGGATTCGGAATGGGTCGGAGCGTTGGATCACGAAATAATATCAATCCCCACGCAAAATTCTGTGGGGGTCGCCGGCAAAATTCATCACCTTTTGGCCGTTTTGAGAATCCGCCACCCAAAGCCCTAACGCCTAATAATCTCGCCGCCTCCCAACGTCATAATACGACCCACCGCAGACCACGCTGTTTCAATGCTAAGGACGATGGGTTTGATGAAATTCCGGCGCCGCCACTCAATTTTTTCTTCTCGGGCCTTTGCATCTCTGCTCTTACTGGAGAAACAATCAGACTCAAGTTCATCATCAAACAAAATGGCTCCACGGCGGCGCCGGGAAATTCAGGGACCCTAATCAGAAGCTTAAATCGTCGTCGAACAATTAATTTCACCGGATGGCCATCAGGGATCCGTGGGAGTAACGAATGTGTTACGACGGCTACGGCAGCGATTTTGGAAGCGGCTCCGGTGGGCGCGGCGAAACGACAGGTTAACTGGAATCCAGCTTTTTCTTGGTCTGATGTTCATGCTAGTGCAATGGAGCATATTTAA

Protein sequence

MSQLLGQSGALRNVPIGGKSTAGKNEKLYRLEILGSVGFGMGRSVGSRNNINPHAKFCGGRRQNSSPFGRFENPPPKALTPNNLAASQRHNTTHRRPRCFNAKDDGFDEIPAPPLNFFFSGLCISALTGETIRLKFIIKQNGSTAAPGNSGTLIRSLNRRRTINFTGWPSGIRGSNECVTTATAAILEAAPVGAAKRQVNWNPAFSWSDVHASAMEHI
BLAST of Bhi03G001468 vs. TrEMBL
Match: tr|A0A1S3B085|A0A1S3B085_CUCME (dof zinc finger protein DOF5.3-like OS=Cucumis melo OX=3656 GN=LOC103484752 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 3.5e-16
Identity = 89/236 (37.71%), Postives = 110/236 (46.61%), Query Frame = 0

Query: 7   QSGALRNVPIG-----------------GKSTAGKNEKLYRLEILGSVGFGMGRSVGSRN 66
           + GALRNVPIG                 GKST+GK + L   EILG VGFG G ++    
Sbjct: 105 KGGALRNVPIGGGCRKNKSAAATVAAAVGKSTSGKMKTL-SSEILGRVGFGNGSAL-DHE 164

Query: 67  NINPHAKFCGGRRQNSSPFGRFENPPPKALTPNNLAASQRHNTTHRRPRC---FNAKDDG 126
            I+   +   G  QNS       +       PNNLAAS  H  ++  P     F+A+  G
Sbjct: 165 IISSPTQILWGSPQNSHLLAILRSATQNP-NPNNLAAS--HVISNDPPPSTTPFHARTTG 224

Query: 127 FDEIPAPPLNFFFSGLCISALTGETIRLKFIIKQNGSTAAPGN------SG--TLIRSLN 186
           FD+ PA   +    GLC S       ++    +QNG     G+      SG   L + L 
Sbjct: 225 FDDPPA-GTHVSSLGLCSSYWRNNQNQVHH--QQNGYPHGGGDQVHGGASGIQELYQKLK 284

Query: 187 RRRTINFTGWPSGIRGSNECVTTATAAILEAAPVGAAKRQVNWNPAFSWSDVHASA 215
                 FT    G  G     TTATAAILEAAPVG  +    WNPAF+WSDVHASA
Sbjct: 285 SSSNNYFTDGHQGSVGVTNVATTATAAILEAAPVGGGEMTGFWNPAFTWSDVHASA 332

BLAST of Bhi03G001468 vs. TrEMBL
Match: tr|A0A0A0KGA6|A0A0A0KGA6_CUCSA (F-box family protein OS=Cucumis sativus OX=3659 GN=Csa_6G490130 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 3.5e-16
Identity = 87/237 (36.71%), Postives = 110/237 (46.41%), Query Frame = 0

Query: 7   QSGALRNVPIG-----------------GKSTAGKNEKLYRLEILGSVGFGMGRSVGSRN 66
           + GALRNVPIG                 GKST+GK + L   EILG VGFG G ++    
Sbjct: 102 KGGALRNVPIGGGCRKNKSAAATVAAAVGKSTSGKMKTL-SSEILGRVGFGNGSAL-DHE 161

Query: 67  NINPHAKFCGGRRQNSSPF----GRFENPPPKALTPNNLAASQRHNTTHRRPRCFNAKDD 126
            I+   +   G  QNS          +NP P  LT +++     +N        F+A+  
Sbjct: 162 IISSPTQILWGSPQNSHLLAILRSATQNPNPSNLTASHVI----NNDPPPSTTPFHARTM 221

Query: 127 GFDEIPAPPLNFFFSGLCISALTGETIRLKFIIKQNGSTAAPG---NSGT-----LIRSL 186
           GFD+ PA P +    GLC S       ++    +QNG     G   +SG      L + L
Sbjct: 222 GFDDPPAGP-HVSSLGLCSSYWRNNQNQVHH--QQNGYPHGGGDQVHSGASGIQELYQKL 281

Query: 187 NRRRTINFTGWPSGIRGSNECVTTATAAILEAAPVGAAKRQVNWNPAFSWSDVHASA 215
                  F+    G  G     TTATAAILEAAPVG  +    WNPAFSWSDVHASA
Sbjct: 282 KSSSNNYFSDSHQGSVGVTNVATTATAAILEAAPVGGGEMTGFWNPAFSWSDVHASA 329

BLAST of Bhi03G001468 vs. NCBI nr
Match: XP_004141929.1 (PREDICTED: dof zinc finger protein DOF5.3-like [Cucumis sativus] >KGN48498.1 F-box family protein [Cucumis sativus])

HSP 1 Score: 94.4 bits (233), Expect = 5.3e-16
Identity = 87/237 (36.71%), Postives = 110/237 (46.41%), Query Frame = 0

Query: 7   QSGALRNVPIG-----------------GKSTAGKNEKLYRLEILGSVGFGMGRSVGSRN 66
           + GALRNVPIG                 GKST+GK + L   EILG VGFG G ++    
Sbjct: 102 KGGALRNVPIGGGCRKNKSAAATVAAAVGKSTSGKMKTL-SSEILGRVGFGNGSAL-DHE 161

Query: 67  NINPHAKFCGGRRQNSSPF----GRFENPPPKALTPNNLAASQRHNTTHRRPRCFNAKDD 126
            I+   +   G  QNS          +NP P  LT +++     +N        F+A+  
Sbjct: 162 IISSPTQILWGSPQNSHLLAILRSATQNPNPSNLTASHVI----NNDPPPSTTPFHARTM 221

Query: 127 GFDEIPAPPLNFFFSGLCISALTGETIRLKFIIKQNGSTAAPG---NSGT-----LIRSL 186
           GFD+ PA P +    GLC S       ++    +QNG     G   +SG      L + L
Sbjct: 222 GFDDPPAGP-HVSSLGLCSSYWRNNQNQVHH--QQNGYPHGGGDQVHSGASGIQELYQKL 281

Query: 187 NRRRTINFTGWPSGIRGSNECVTTATAAILEAAPVGAAKRQVNWNPAFSWSDVHASA 215
                  F+    G  G     TTATAAILEAAPVG  +    WNPAFSWSDVHASA
Sbjct: 282 KSSSNNYFSDSHQGSVGVTNVATTATAAILEAAPVGGGEMTGFWNPAFSWSDVHASA 329

BLAST of Bhi03G001468 vs. NCBI nr
Match: XP_008440237.1 (PREDICTED: dof zinc finger protein DOF5.3-like [Cucumis melo])

HSP 1 Score: 94.4 bits (233), Expect = 5.3e-16
Identity = 89/236 (37.71%), Postives = 110/236 (46.61%), Query Frame = 0

Query: 7   QSGALRNVPIG-----------------GKSTAGKNEKLYRLEILGSVGFGMGRSVGSRN 66
           + GALRNVPIG                 GKST+GK + L   EILG VGFG G ++    
Sbjct: 105 KGGALRNVPIGGGCRKNKSAAATVAAAVGKSTSGKMKTL-SSEILGRVGFGNGSAL-DHE 164

Query: 67  NINPHAKFCGGRRQNSSPFGRFENPPPKALTPNNLAASQRHNTTHRRPRC---FNAKDDG 126
            I+   +   G  QNS       +       PNNLAAS  H  ++  P     F+A+  G
Sbjct: 165 IISSPTQILWGSPQNSHLLAILRSATQNP-NPNNLAAS--HVISNDPPPSTTPFHARTTG 224

Query: 127 FDEIPAPPLNFFFSGLCISALTGETIRLKFIIKQNGSTAAPGN------SG--TLIRSLN 186
           FD+ PA   +    GLC S       ++    +QNG     G+      SG   L + L 
Sbjct: 225 FDDPPA-GTHVSSLGLCSSYWRNNQNQVHH--QQNGYPHGGGDQVHGGASGIQELYQKLK 284

Query: 187 RRRTINFTGWPSGIRGSNECVTTATAAILEAAPVGAAKRQVNWNPAFSWSDVHASA 215
                 FT    G  G     TTATAAILEAAPVG  +    WNPAF+WSDVHASA
Sbjct: 285 SSSNNYFTDGHQGSVGVTNVATTATAAILEAAPVGGGEMTGFWNPAFTWSDVHASA 332

BLAST of Bhi03G001468 vs. NCBI nr
Match: XP_022949784.1 (dof zinc finger protein 2-like [Cucurbita moschata])

HSP 1 Score: 85.9 bits (211), Expect = 1.9e-13
Identity = 82/237 (34.60%), Postives = 106/237 (44.73%), Query Frame = 0

Query: 7   QSGALRNVPIG------------GKSTAGKNEKLYRLEILGSVGFGMGRSVGSRNNINPH 66
           + GALRNVPIG            GKS AGK + L   EILG VGFG G ++   + I   
Sbjct: 104 KGGALRNVPIGGGCRKNKSAAVVGKSAAGKMKTL-SSEILGRVGFGTGSALD--HEIMSP 163

Query: 67  AKFCGGRRQNSSPF----GRFENPPPKALTPNNLAASQRHN--------TTHRRPRCFNA 126
            +   G  QNS          +N  P    PNNL  S   N        T    P  F+A
Sbjct: 164 TQILWGSPQNSHLLSILRSATQNQNP---NPNNLVGSHVSNDPPGTAAATATATP--FHA 223

Query: 127 KDDGFDEIPAPPLNFFFSGLCISALTGETIRL---KFIIKQNGSTAAPGNSGTLIRSLNR 186
           +  GFD    P  +    GLC S       ++   +  I   G     G +G +     +
Sbjct: 224 RTMGFD----PATHISSLGLCSSYWRKNQSQVHPQQNGIPHGGGDQVQGGAGGIQELYQK 283

Query: 187 RRTINFTGWPSGIRGSNECVTTATAAILEAAPVGAAKRQVNWNPAFSWSDVHASAME 217
            ++ +   + +G +GS       TAA+LEAAPVG  +    WNPAFSWSDVHASA E
Sbjct: 284 LKSSSSNYFSNGQQGSVGVTNGGTAAMLEAAPVGGGETTGYWNPAFSWSDVHASANE 328

BLAST of Bhi03G001468 vs. NCBI nr
Match: XP_023544466.1 (uncharacterized protein LOC111804035 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 85.1 bits (209), Expect = 3.2e-13
Identity = 82/237 (34.60%), Postives = 106/237 (44.73%), Query Frame = 0

Query: 7   QSGALRNVPIG------------GKSTAGKNEKLYRLEILGSVGFGMGRSVGSRNNINPH 66
           + GALRNVPIG            GKS AGK + L   EILG VGFG G ++   + I   
Sbjct: 95  KGGALRNVPIGGGCRKNKSAAVVGKSAAGKMKTL-SSEILGRVGFGTGSALD--HEIMSP 154

Query: 67  AKFCGGRRQNSSPF----GRFENPPPKALTPNNLAASQRHN--------TTHRRPRCFNA 126
            +   G  QNS          +N  P    PNNL  S   N        T    P  F+A
Sbjct: 155 TQILWGSPQNSHLLSILRSATQNQNP---NPNNLVGSHVINDPPATAAATATATP--FHA 214

Query: 127 KDDGFDEIPAPPLNFFFSGLCISALTGETIRL---KFIIKQNGSTAAPGNSGTLIRSLNR 186
           +  GFD    P  +    GLC S       ++   +  I   G     G +G +     +
Sbjct: 215 RTMGFD----PATHISSLGLCSSYWRKNQSQVHPQQNGIPHGGGDQVQGGAGGIQELYQK 274

Query: 187 RRTINFTGWPSGIRGSNECVTTATAAILEAAPVGAAKRQVNWNPAFSWSDVHASAME 217
            ++ +   + +G +GS       TAA+LEAAPVG  +    WNPAFSWSDVHASA E
Sbjct: 275 LKSSSSNYFSNGQQGSVGVTNGGTAAMLEAAPVGGGETTGYWNPAFSWSDVHASANE 319

BLAST of Bhi03G001468 vs. NCBI nr
Match: XP_023003432.1 (dof zinc finger protein DOF2.5-like [Cucurbita maxima])

HSP 1 Score: 83.6 bits (205), Expect = 9.3e-13
Identity = 83/239 (34.73%), Postives = 113/239 (47.28%), Query Frame = 0

Query: 7   QSGALRNVPIGG-------------KSTAGKNEKLYRLEILGSVGFGMGRSVGSRNNINP 66
           + GALRNVPIGG             KS A K  K    +I G VGFG G ++  R  +  
Sbjct: 88  KGGALRNVPIGGGCRKNRTAAATVVKSAAAK-MKTVSSDIFGRVGFGNGSALDPR--VTS 147

Query: 67  HAKFCGGRRQNSSPFG------RFENPPPKALTPNNL-----AASQRHNTTHRRPRCFNA 126
            A+   G  QNS          + +NP PK+L  +++     AAS    TT      F+A
Sbjct: 148 PAQILWGSPQNSHLLAVLRSATQNQNPNPKSLARSHVINDPPAASATATTT----TPFHA 207

Query: 127 KDDGFDEIPAPPLNFFFS-GLCISALTGETIRLKFIIKQNGSTAAPGN----SGTLIRSL 186
           +  GFD     P+N   S GLC S         + + +QNG     G+    + T I+ L
Sbjct: 208 RTMGFD-----PVNHISSLGLCSSYWRNN--HTQVLHQQNGHVHGSGDQVSGASTGIQEL 267

Query: 187 NRR-RTINFTGWPSGIRGSNECVTTATAAILEAAPVGAAKRQVN-WNPAFSWSDVHASA 215
            ++ ++ +   +  G +GS    +  TAAILE APVG  +     WNP FSWSDVHASA
Sbjct: 268 YQKLKSSSSNYFMDGQQGSVGVTSVGTAAILETAPVGGGETAAGYWNPTFSWSDVHASA 312

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S3B085|A0A1S3B085_CUCME3.5e-1637.71dof zinc finger protein DOF5.3-like OS=Cucumis melo OX=3656 GN=LOC103484752 PE=4... [more]
tr|A0A0A0KGA6|A0A0A0KGA6_CUCSA3.5e-1636.71F-box family protein OS=Cucumis sativus OX=3659 GN=Csa_6G490130 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_004141929.15.3e-1636.71PREDICTED: dof zinc finger protein DOF5.3-like [Cucumis sativus] >KGN48498.1 F-b... [more]
XP_008440237.15.3e-1637.71PREDICTED: dof zinc finger protein DOF5.3-like [Cucumis melo][more]
XP_022949784.11.9e-1334.60dof zinc finger protein 2-like [Cucurbita moschata][more]
XP_023544466.13.2e-1334.60uncharacterized protein LOC111804035 [Cucurbita pepo subsp. pepo][more]
XP_023003432.19.3e-1334.73dof zinc finger protein DOF2.5-like [Cucurbita maxima][more]

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi03M001468Bhi03M001468mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..97

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi03G001468Wax gourdwgowgoB074
Bhi03G001468Wax gourdwgowgoB083
Bhi03G001468Wax gourdwgowgoB101
Bhi03G001468Cucumber (Gy14) v1cgywgoB155
Bhi03G001468Cucumber (Gy14) v1cgywgoB460
Bhi03G001468Cucumber (Gy14) v2cgybwgoB181
Bhi03G001468Cucumber (Gy14) v2cgybwgoB600
Bhi03G001468Cucumber (Gy14) v2cgybwgoB657
Bhi03G001468Cucurbita maxima (Rimu)cmawgoB0790
Bhi03G001468Cucurbita maxima (Rimu)cmawgoB0953
Bhi03G001468Cucurbita maxima (Rimu)cmawgoB1060
Bhi03G001468Cucurbita moschata (Rifu)cmowgoB0785
Bhi03G001468Cucurbita moschata (Rifu)cmowgoB0760
Bhi03G001468Cucurbita moschata (Rifu)cmowgoB0953
Bhi03G001468Cucurbita moschata (Rifu)cmowgoB1053
Bhi03G001468Cucurbita pepo (Zucchini)cpewgoB0099
Bhi03G001468Cucurbita pepo (Zucchini)cpewgoB0150
Bhi03G001468Cucurbita pepo (Zucchini)cpewgoB0609
Bhi03G001468Cucurbita pepo (Zucchini)cpewgoB1053
Bhi03G001468Wild cucumber (PI 183967)cpiwgoB187
Bhi03G001468Wild cucumber (PI 183967)cpiwgoB636
Bhi03G001468Wild cucumber (PI 183967)cpiwgoB698
Bhi03G001468Cucumber (Chinese Long) v3cucwgoB193
Bhi03G001468Cucumber (Chinese Long) v3cucwgoB650
Bhi03G001468Cucumber (Chinese Long) v3cucwgoB710
Bhi03G001468Cucumber (Chinese Long) v2cuwgoB188
Bhi03G001468Cucumber (Chinese Long) v2cuwgoB630
Bhi03G001468Cucumber (Chinese Long) v2cuwgoB686
Bhi03G001468Bottle gourd (USVL1VR-Ls)lsiwgoB171
Bhi03G001468Bottle gourd (USVL1VR-Ls)lsiwgoB616
Bhi03G001468Melon (DHL92) v3.6.1medwgoB358
Bhi03G001468Melon (DHL92) v3.6.1medwgoB660
Bhi03G001468Melon (DHL92) v3.5.1mewgoB358
Bhi03G001468Melon (DHL92) v3.5.1mewgoB653
Bhi03G001468Watermelon (Charleston Gray)wcgwgoB228
Bhi03G001468Watermelon (Charleston Gray)wcgwgoB314
Bhi03G001468Watermelon (Charleston Gray)wcgwgoB643
Bhi03G001468Watermelon (97103) v2wgowmbB403
Bhi03G001468Watermelon (97103) v2wgowmbB419
Bhi03G001468Watermelon (97103) v2wgowmbB447
Bhi03G001468Watermelon (97103) v1wgowmB417
Bhi03G001468Watermelon (97103) v1wgowmB434
Bhi03G001468Silver-seed gourdcarwgoB0235
Bhi03G001468Silver-seed gourdcarwgoB0489
Bhi03G001468Silver-seed gourdcarwgoB0944