Bhi03G001237 (gene) Wax gourd

Overview
NameBhi03G001237
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr3 : 33864070 .. 33864876 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCAAAGGCAGTTTAGGGAAGAAGAACCAGTACTGCGCCAACAGAACTTTGATGCATTCGCATCAGTCTTGCTCTAGAAGGAATTATAAGAAAAGGTTGTAGTTCCTAAACAGTCTGTTGAGTCTGATTCGGGCTCCACGCCTTTCCAACAAGGGGAAGGTAAGGGCCATGTTGTGGAAGAAGAGGAGCTAGATGACCTCTTTGTGTATAACTCACCAGAATTGCCCGTGCTTTACGAAGACCTCTGGATGAGAAGGAGGACACGAAAAAATCCATAAAAAATGCTGGAAATGGAGTGACTCCTGGGAGGGTCACAAGATCAGCCAGTAAGCGAAAAGAAGATGACAGTGGGGATGGCTCGGTGAATCATCTAGTGATGAGGAATGGGAAGTTGAATATGTGGTTCACTAGAAAGGACGTTTGAAGGAACTTAAGAAGCGGAAAGTTTTTTAAGAGTGTGGTTTTATATAGACCGATGGAACATTACCACAGTTTTTCACTCAGGTTGTTGCATATTATCGGTGGGACATTCTGTGCAAGCAACCAAAGCCAACTAGCATTGCTTTGGTCAGGGAGTTCTATAGGCGGAAGAATCGAAAAACATGCACGGCCATGGTCAGAAGTGTGTCTGTGGATTTTTCAACTTGTGCAATCAATGTCATATACTCACTGCCCGATGAGAATGTGGAGGAAAGCTTTATGTGCATGTACTCCCCAACGAAAGCACAAATTCAGAATGTGCTTCGCGTGGTGGGGGGGCCTGGTACTGAGTGGGTCTTGTCACCACATGTTGCCGCACCATGA

mRNA sequence

ATGGTCAAAGGCAGTTTAGGGAAGAAGAACCAGTACTGCGCCAACAGAACTTTGATGCATTCGCATCAGTCTTGCTCTAGAAGGAATTATAAGAAAAGAATTGCCCGTGCTTTACGAAGACCTCTGGATGAGAAGGAGGACACGAAAAAATCCATAAAAAATGCTGGAAATGGAGTGACTCCTGGGAGGGTCACAAGATCAGCCAGTAAGCGAAAAGAAGATGACAGTGGGGATGGCTCGACCGATGGAACATTACCACAGTTTTTCACTCAGGTTGTTGCATATTATCGGTGGGACATTCTGTGCAAGCAACCAAAGCCAACTAGCATTGCTTTGGTCAGGGAGTTCTATAGGCGGAAGAATCGAAAAACATGCACGGCCATGGTCAGAAGTGTGTCTGTGGATTTTTCAACTTGTGCAATCAATGTCATATACTCACTGCCCGATGAGAATGTGGAGGAAAGCTTTATGTGCATGTACTCCCCAACGAAAGCACAAATTCAGAATGTGCTTCGCGTGGTGGGGGGGCCTGGTACTGAGTGGGTCTTGTCACCACATGTTGCCGCACCATGA

Coding sequence (CDS)

ATGGTCAAAGGCAGTTTAGGGAAGAAGAACCAGTACTGCGCCAACAGAACTTTGATGCATTCGCATCAGTCTTGCTCTAGAAGGAATTATAAGAAAAGAATTGCCCGTGCTTTACGAAGACCTCTGGATGAGAAGGAGGACACGAAAAAATCCATAAAAAATGCTGGAAATGGAGTGACTCCTGGGAGGGTCACAAGATCAGCCAGTAAGCGAAAAGAAGATGACAGTGGGGATGGCTCGACCGATGGAACATTACCACAGTTTTTCACTCAGGTTGTTGCATATTATCGGTGGGACATTCTGTGCAAGCAACCAAAGCCAACTAGCATTGCTTTGGTCAGGGAGTTCTATAGGCGGAAGAATCGAAAAACATGCACGGCCATGGTCAGAAGTGTGTCTGTGGATTTTTCAACTTGTGCAATCAATGTCATATACTCACTGCCCGATGAGAATGTGGAGGAAAGCTTTATGTGCATGTACTCCCCAACGAAAGCACAAATTCAGAATGTGCTTCGCGTGGTGGGGGGGCCTGGTACTGAGTGGGTCTTGTCACCACATGTTGCCGCACCATGA

Protein sequence

MVKGSLGKKNQYCANRTLMHSHQSCSRRNYKKRIARALRRPLDEKEDTKKSIKNAGNGVTPGRVTRSASKRKEDDSGDGSTDGTLPQFFTQVVAYYRWDILCKQPKPTSIALVREFYRRKNRKTCTAMVRSVSVDFSTCAINVIYSLPDENVEESFMCMYSPTKAQIQNVLRVVGGPGTEWVLSPHVAAP
Homology
[Close]
BLAST of Bhi03G001237 vs. TrEMBL
Match: tr|A0A0A0KER1|A0A0A0KER1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G149380 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 8.3e-06
Identity = 33/100 (33.00%), Postives = 48/100 (48.00%), Query Frame = 0 

Query: 86  PQFFTQVVAYYRWDILCKQPKPTSIALVREFYRRKNRKTCTAMVRSVSVDFSTCAINVIY 145
           PQ F Q +    W    KQP+P  +++VREFY      +  + VR   V F    IN  Y
Sbjct: 56  PQLF-QNIMQRGWSDFVKQPEPAVLSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYY 115

Query: 146 SLPDENVEESFMCMYSPTKAQIQNVLRVVGGPGTEWVLSP 186
            LP  N E     +Y+     +  ++R +  PG EWV++P
Sbjct: 116 HLP--NFERDEYDIYASEHVDVHQIIRELCQPGAEWVINP 152

[Close]
BLAST of Bhi03G001237 vs. TrEMBL
Match: tr|A0A1J6K985|A0A1J6K985_NICAT (Uncharacterized protein OS=Nicotiana attenuata OX=49451 GN=A4A49_43574 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 9.1e-05
Identity = 28/90 (31.11%), Postives = 48/90 (53.33%), Query Frame = 0 

Query: 82  DGTLPQFFTQVVAYYRWDILCKQPKPTSIALVREFYRRKNRKTCTAMVRSVSVDFSTCAI 141
           DG    F  +++ +++W    KQP    + LV EFY   ++ T  ++VR V+VD+S   I
Sbjct: 31  DGIEDAFIHEIIEHHQWKDFAKQPGSFYVDLVTEFYNNLDKSTNVSIVRGVNVDYSLEKI 90

Query: 142 NVIYSLPDENVEESFMCMYSPTKAQIQNVL 172
           N +Y LPD + + +   + SP    ++  L
Sbjct: 91  NKVYDLPDVDDKVTRAFLKSPNLDLMEETL 120

[Close]
BLAST of Bhi03G001237 vs. TrEMBL
Match: tr|A0A2P5CYU1|A0A2P5CYU1_PARAD (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_110740 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 3.5e-04
Identity = 34/100 (34.00%), Postives = 49/100 (49.00%), Query Frame = 0 

Query: 86  PQFFTQVVAYYRWDILCKQPKPTSIALVREFYRR-KNRKTCTAMVRSVSVDFSTCAINVI 145
           P F   V+  + W + C  PK   + LVREFY    N +  T  VR V V  S  AIN I
Sbjct: 30  PPFIVDVIIQHNWQLFCTHPKDPIVPLVREFYANLTNLEEDTVYVRGVQVPLSMEAINTI 89

Query: 146 YSLPDENVEESFMCMYSPTKAQIQNVLRVVGGPGTEWVLS 185
           + L D  V+E    + +  ++++  VL+ V     EW +S
Sbjct: 90  FGLGD-LVDEYSEFVENIIESKLLMVLKTVAIAEAEWNVS 128

[Close]
BLAST of Bhi03G001237 vs. NCBI nr
Match: KGN46897.1 (hypothetical protein Csa_6G149380 [Cucumis sativus])

HSP 1 Score: 59.7 bits (143), Expect = 1.2e-05
Identity = 33/100 (33.00%), Postives = 48/100 (48.00%), Query Frame = 0 

Query: 86  PQFFTQVVAYYRWDILCKQPKPTSIALVREFYRRKNRKTCTAMVRSVSVDFSTCAINVIY 145
           PQ F Q +    W    KQP+P  +++VREFY      +  + VR   V F    IN  Y
Sbjct: 56  PQLF-QNIMQRGWSDFVKQPEPAVLSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYY 115

Query: 146 SLPDENVEESFMCMYSPTKAQIQNVLRVVGGPGTEWVLSP 186
            LP  N E     +Y+     +  ++R +  PG EWV++P
Sbjct: 116 HLP--NFERDEYDIYASEHVDVHQIIRELCQPGAEWVINP 152

[Close]
BLAST of Bhi03G001237 vs. NCBI nr
Match: OIT26658.1 (hypothetical protein A4A49_43574 [Nicotiana attenuata])

HSP 1 Score: 56.2 bits (134), Expect = 1.4e-04
Identity = 28/90 (31.11%), Postives = 48/90 (53.33%), Query Frame = 0 

Query: 82  DGTLPQFFTQVVAYYRWDILCKQPKPTSIALVREFYRRKNRKTCTAMVRSVSVDFSTCAI 141
           DG    F  +++ +++W    KQP    + LV EFY   ++ T  ++VR V+VD+S   I
Sbjct: 31  DGIEDAFIHEIIEHHQWKDFAKQPGSFYVDLVTEFYNNLDKSTNVSIVRGVNVDYSLEKI 90

Query: 142 NVIYSLPDENVEESFMCMYSPTKAQIQNVL 172
           N +Y LPD + + +   + SP    ++  L
Sbjct: 91  NKVYDLPDVDDKVTRAFLKSPNLDLMEETL 120

[Close]
BLAST of Bhi03G001237 vs. NCBI nr
Match: PON66208.1 (hypothetical protein PanWU01x14_110740, partial [Parasponia andersonii])

HSP 1 Score: 54.3 bits (129), Expect = 5.2e-04
Identity = 34/100 (34.00%), Postives = 49/100 (49.00%), Query Frame = 0 

Query: 86  PQFFTQVVAYYRWDILCKQPKPTSIALVREFYRR-KNRKTCTAMVRSVSVDFSTCAINVI 145
           P F   V+  + W + C  PK   + LVREFY    N +  T  VR V V  S  AIN I
Sbjct: 30  PPFIVDVIIQHNWQLFCTHPKDPIVPLVREFYANLTNLEEDTVYVRGVQVPLSMEAINTI 89

Query: 146 YSLPDENVEESFMCMYSPTKAQIQNVLRVVGGPGTEWVLS 185
           + L D  V+E    + +  ++++  VL+ V     EW +S
Sbjct: 90  FGLGD-LVDEYSEFVENIIESKLLMVLKTVAIAEAEWNVS 128

The following BLAST results are available for this feature:
BLAST of Bhi03G001237 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi03G001237 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi03G001237 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KER1|A0A0A0KER1_CUCSA8.3e-0633.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G149380 PE=4 SV=1[more]
tr|A0A1J6K985|A0A1J6K985_NICAT9.1e-0531.11Uncharacterized protein OS=Nicotiana attenuata OX=49451 GN=A4A49_43574 PE=4 SV=1[more]
tr|A0A2P5CYU1|A0A2P5CYU1_PARAD3.5e-0434.00Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
BLAST of Bhi03G001237 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN46897.11.2e-0533.00hypothetical protein Csa_6G149380 [Cucumis sativus][more]
OIT26658.11.4e-0431.11hypothetical protein A4A49_43574 [Nicotiana attenuata][more]
PON66208.15.2e-0434.00hypothetical protein PanWU01x14_110740, partial [Parasponia andersonii][more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi03M001237Bhi03M001237mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..52

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi03G001237Cucurbita maxima (Rimu)cmawgoB1035
Bhi03G001237Cucurbita maxima (Rimu)cmawgoB1073
Bhi03G001237Cucurbita moschata (Rifu)cmowgoB0786
Bhi03G001237Cucurbita moschata (Rifu)cmowgoB0878
Bhi03G001237Cucurbita moschata (Rifu)cmowgoB1029
Bhi03G001237Cucurbita moschata (Rifu)cmowgoB1067
Bhi03G001237Cucurbita pepo (Zucchini)cpewgoB0103
Bhi03G001237Cucurbita pepo (Zucchini)cpewgoB0545
Bhi03G001237Cucurbita pepo (Zucchini)cpewgoB0600
Bhi03G001237Cucurbita pepo (Zucchini)cpewgoB0695
Bhi03G001237Cucurbita pepo (Zucchini)cpewgoB0810
Bhi03G001237Cucurbita pepo (Zucchini)cpewgoB1133
Bhi03G001237Wild cucumber (PI 183967)cpiwgoB328
Bhi03G001237Wild cucumber (PI 183967)cpiwgoB410
Bhi03G001237Cucumber (Chinese Long) v3cucwgoB332
Bhi03G001237Cucumber (Chinese Long) v3cucwgoB411
Bhi03G001237Cucumber (Chinese Long) v2cuwgoB325
Bhi03G001237Cucumber (Chinese Long) v2cuwgoB407
Bhi03G001237Bottle gourd (USVL1VR-Ls)lsiwgoB184
Bhi03G001237Bottle gourd (USVL1VR-Ls)lsiwgoB334
Bhi03G001237Melon (DHL92) v3.6.1medwgoB427
Bhi03G001237Melon (DHL92) v3.6.1medwgoB651
Bhi03G001237Melon (DHL92) v3.6.1medwgoB662
Bhi03G001237Melon (DHL92) v3.5.1mewgoB424
Bhi03G001237Melon (DHL92) v3.5.1mewgoB645
Bhi03G001237Melon (DHL92) v3.5.1mewgoB655
Bhi03G001237Watermelon (Charleston Gray)wcgwgoB126
Bhi03G001237Watermelon (Charleston Gray)wcgwgoB383
Bhi03G001237Watermelon (97103) v2wgowmbB412
Bhi03G001237Watermelon (97103) v2wgowmbB423
Bhi03G001237Watermelon (97103) v1wgowmB412
Bhi03G001237Watermelon (97103) v1wgowmB438
Bhi03G001237Silver-seed gourdcarwgoB0210
Bhi03G001237Silver-seed gourdcarwgoB0576
Bhi03G001237Silver-seed gourdcarwgoB1076
Bhi03G001237Silver-seed gourdcarwgoB1170
Bhi03G001237Wax gourdwgowgoB012
Bhi03G001237Cucumber (Gy14) v1cgywgoB068
Bhi03G001237Cucumber (Gy14) v2cgybwgoB316
Bhi03G001237Cucumber (Gy14) v2cgybwgoB388
Bhi03G001237Cucurbita maxima (Rimu)cmawgoB0353
Bhi03G001237Cucurbita maxima (Rimu)cmawgoB0794
Bhi03G001237Cucurbita maxima (Rimu)cmawgoB0881