Bhi03G001094 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi03G001094
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Protein of unknown function (DUF3511)
Location	chr3 : 29728294 .. 29728551 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAGAAGCAAAACATTTAGTGGGTCTTACTCAAAAGCCTATGGAGATGTGAGGTTTGGATTTGAGGACAATCCCAAATCCTACAGCTTCAATGGAACAGTCAACAAGGAAGATGTGGCCAATCCAGAACTCAAGAGAAGGCAAAGAGTAGCTACTTACAATATGTATTCAATGGAAGGAAAGCTGAAGAAGTCCTTAAGAACCAGCTTCAAGTGGATCAAGAACAAGTTTTCCCACAGCTTTTATGATGATTGA

mRNA sequence

ATGGAGAGAAGCAAAACATTTAGTGGGTCTTACTCAAAAGCCTATGGAGATGTGAGGTTTGGATTTGAGGACAATCCCAAATCCTACAGCTTCAATGGAACAGTCAACAAGGAAGATGTGGCCAATCCAGAACTCAAGAGAAGGCAAAGAGTAGCTACTTACAATATGTATTCAATGGAAGGAAAGCTGAAGAAGTCCTTAAGAACCAGCTTCAAGTGGATCAAGAACAAGTTTTCCCACAGCTTTTATGATGATTGA

Coding sequence (CDS)

ATGGAGAGAAGCAAAACATTTAGTGGGTCTTACTCAAAAGCCTATGGAGATGTGAGGTTTGGATTTGAGGACAATCCCAAATCCTACAGCTTCAATGGAACAGTCAACAAGGAAGATGTGGCCAATCCAGAACTCAAGAGAAGGCAAAGAGTAGCTACTTACAATATGTATTCAATGGAAGGAAAGCTGAAGAAGTCCTTAAGAACCAGCTTCAAGTGGATCAAGAACAAGTTTTCCCACAGCTTTTATGATGATTGA

Protein sequence

MERSKTFSGSYSKAYGDVRFGFEDNPKSYSFNGTVNKEDVANPELKRRQRVATYNMYSMEGKLKKSLRTSFKWIKNKFSHSFYDD

Homology

[Close]

BLAST of Bhi03G001094 vs. TAIR10
Match: AT4G09890.1 (Protein of unknown function (DUF3511))

HSP 1 Score: 71.2 bits (173), Expect = 3.4e-13
Identity = 38/80 (47.50%), Postives = 56/80 (70.00%), Query Frame = 0


Query: 1  MERSKTFSGSYSKAYGDVRFGFEDN-PKSYSFNGTVNKEDVANPELKRRQRVATYNMYSM 60
          M+ SK+++  YS ++    FG++ N   SY+FNG     D   PE+KR++RVA+YN+++ 
Sbjct: 2  MKGSKSYT-EYSSSFSTDEFGYDQNRSNSYNFNGPCINTD---PEMKRKKRVASYNLFAT 61

Query: 61 EGKLKKSLRTSFKWIKNKFS 80
          E KLK +L+ SFKWIKNKFS
Sbjct: 62 EEKLKSTLKNSFKWIKNKFS 77

[Close]

BLAST of Bhi03G001094 vs. TAIR10
Match: AT5G11970.1 (Protein of unknown function (DUF3511))

HSP 1 Score: 55.1 bits (131), Expect = 2.5e-08
Identity = 29/74 (39.19%), Postives = 43/74 (58.11%), Query Frame = 0


Query: 10  SYSKAYGDVRFGFEDNPKSYSFNGTVNKEDVANPELKRRQRVATYNMYSMEGKLKKSLRT 69
           SYS +YG       D  K  S         + +PEL+R++RVA+Y MY +EGK+K S R 
Sbjct: 30  SYSASYGTRENNIYDVKKEKSI-ARSKSWGITDPELQRKKRVASYKMYGVEGKVKGSFRN 89

Query: 70  SFKWIKNKFSHSFY 84
           SF+W+K +++   Y
Sbjct: 90  SFRWLKQRYTQVVY 102

[Close]

BLAST of Bhi03G001094 vs. TAIR10
Match: AT2G19460.1 (Protein of unknown function (DUF3511))

HSP 1 Score: 52.8 bits (125), Expect = 1.2e-07
Identity = 30/70 (42.86%), Postives = 44/70 (62.86%), Query Frame = 0


Query: 10  SYSKAYGD--VRFGFEDNPKSYSFNGTVNKEDVANPELKRRQRVATYNMYSMEGKLKKSL 69
           SYS +Y D   R   + NPK    + + +     +P+L+R++RV +Y  Y++EGKLK S 
Sbjct: 42  SYSTSYTDYPTRIPEDQNPKK-GRSSSSSSWGFVDPDLQRKKRVVSYRAYTVEGKLKGSF 101

Query: 70  RTSFKWIKNK 78
           R SFKWIK+K
Sbjct: 102 RKSFKWIKDK 110

[Close]

BLAST of Bhi03G001094 vs. TAIR10
Match: AT3G05725.1 (Protein of unknown function (DUF3511))

HSP 1 Score: 51.2 bits (121), Expect = 3.6e-07
Identity = 25/50 (50.00%), Postives = 36/50 (72.00%), Query Frame = 0


Query: 26  PKSYSFNGTVNKEDVANPELKRRQRVATYNMYSMEGKLKKSLRTSFKWIK 76
           P+  S + T+ K    +PE+KR++RVA Y +YS EGK+K +LR S+KWIK
Sbjct: 65  PRRSSSHSTLFKGWWNDPEIKRKRRVAKYKLYSAEGKMKITLRKSYKWIK 114

[Close]

BLAST of Bhi03G001094 vs. TAIR10
Match: AT3G62640.1 (Protein of unknown function (DUF3511))

HSP 1 Score: 48.1 bits (113), Expect = 3.1e-06
Identity = 18/37 (48.65%), Postives = 30/37 (81.08%), Query Frame = 0


Query: 44  ELKRRQRVATYNMYSMEGKLKKSLRTSFKWIKNKFSH 81
           E KR++R+ATY  Y++EGK+K +++  F WIK+++SH
Sbjct: 70  ETKRKKRIATYKTYALEGKVKSTVKKGFHWIKDRYSH 106

[Close]

BLAST of Bhi03G001094 vs. TrEMBL
Match: tr|A0A0A0KFC2|A0A0A0KFC2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486830 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.5e-36
Identity = 78/85 (91.76%), Postives = 80/85 (94.12%), Query Frame = 0


Query: 1  MERSKTFSGSYSKAYGDVRFGFEDNPKSYSFNGTVNKEDVANPELKRRQRVATYNMYSME 60
          MERSK+ SGSYSKAYGDVRFGFEDNPKSYSFNGT+ KEDVAN ELKRRQRVATYNMYSME
Sbjct: 2  MERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKKEDVANQELKRRQRVATYNMYSME 61

Query: 61 GKLKKSLRTSFKWIKNKFSHSFYDD 86
          GKLKKSLR SFKWIKNK SHSFYDD
Sbjct: 62 GKLKKSLRNSFKWIKNKISHSFYDD 86

[Close]

BLAST of Bhi03G001094 vs. TrEMBL
Match: tr|A0A2P6RRL4|A0A2P6RRL4_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0117891 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.3e-23
Identity = 59/94 (62.77%), Postives = 70/94 (74.47%), Query Frame = 0


Query: 1  MERSKTFSGSYSKAYGDVRFGFEDNPKSYSFNGTVNKED---------VANPELKRRQRV 60
          ME+SK+FSG YS AY + RFGFED PKSYSFNG V+K +          +NPEL+RR+RV
Sbjct: 1  MEKSKSFSGYYSTAYTEARFGFEDRPKSYSFNGPVSKVEGPSSASGSGNSNPELERRKRV 60

Query: 61 ATYNMYSMEGKLKKSLRTSFKWIKNKFSHSFYDD 86
          A YNMY+MEGK K SLR SFKWIK KF  +FYD+
Sbjct: 61 ANYNMYTMEGKFKSSLRNSFKWIKGKFVDNFYDE 94

[Close]

BLAST of Bhi03G001094 vs. TrEMBL
Match: tr|W9RA26|W9RA26_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_006721 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.8e-22
Identity = 58/91 (63.74%), Postives = 69/91 (75.82%), Query Frame = 0


Query: 1  MERSKTFSGSYSKAYGDVRFGFEDNPKSYSFNG-TVNKED-----VANPELKRRQRVATY 60
          M+RSK+  G YS  YGD RFGFED  KSYSFNG +V  ED      +NPE+KRR+RVA Y
Sbjct: 1  MDRSKSLPGHYSSLYGDARFGFEDRAKSYSFNGPSVRVEDHELGSSSNPEMKRRKRVANY 60

Query: 61 NMYSMEGKLKKSLRTSFKWIKNKFSHSFYDD 86
          NMY+MEGKLK SLR SFKWIK+KF  ++YD+
Sbjct: 61 NMYAMEGKLKSSLRNSFKWIKSKFVDTYYDE 91

[Close]

BLAST of Bhi03G001094 vs. TrEMBL
Match: tr|A0A2P5BU01|A0A2P5BU01_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_308860 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 4.8e-22
Identity = 57/91 (62.64%), Postives = 66/91 (72.53%), Query Frame = 0


Query: 1  MERSKTFSGSYSKAYGDVRFGFEDNPKSYSFNGTVNK------EDVANPELKRRQRVATY 60
          MERSK+  G YS  YGD RFGFED  KSYSFNG  ++          NPE+KRR+RVA Y
Sbjct: 1  MERSKSLPGHYSSLYGDGRFGFEDRSKSYSFNGPSSQAADDEFASSGNPEMKRRKRVAAY 60

Query: 61 NMYSMEGKLKKSLRTSFKWIKNKFSHSFYDD 86
          NMY+MEGKLK SLR SFKWIK+KF  ++YDD
Sbjct: 61 NMYAMEGKLKSSLRNSFKWIKSKFVDTYYDD 91

[Close]

BLAST of Bhi03G001094 vs. TrEMBL
Match: tr|M5W4U3|M5W4U3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G166900 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 6.9e-21
Identity = 55/92 (59.78%), Postives = 67/92 (72.83%), Query Frame = 0


Query: 1  MERSKTFSGSYSKAYGDVRFGFEDNPKSYSFNGTVNKEDV-------ANPELKRRQRVAT 60
          ME+SK+FSG YS  Y + +FGFED  KSYSFNG V+   V        NPEL+RR+RVA+
Sbjct: 1  MEKSKSFSGYYSTGYTEAQFGFEDRSKSYSFNGPVSCSKVDELSSTSGNPELERRKRVAS 60

Query: 61 YNMYSMEGKLKKSLRTSFKWIKNKFSHSFYDD 86
          YNMY++EGK K SLR SFKWIK KF  +FYD+
Sbjct: 61 YNMYAVEGKFKSSLRNSFKWIKGKFVDNFYDE 92

[Close]

BLAST of Bhi03G001094 vs. NCBI nr
Match: KGN48410.1 (hypothetical protein Csa_6G486830 [Cucumis sativus])

HSP 1 Score: 160.6 bits (405), Expect = 2.3e-36
Identity = 78/85 (91.76%), Postives = 80/85 (94.12%), Query Frame = 0


Query: 1  MERSKTFSGSYSKAYGDVRFGFEDNPKSYSFNGTVNKEDVANPELKRRQRVATYNMYSME 60
          MERSK+ SGSYSKAYGDVRFGFEDNPKSYSFNGT+ KEDVAN ELKRRQRVATYNMYSME
Sbjct: 2  MERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKKEDVANQELKRRQRVATYNMYSME 61

Query: 61 GKLKKSLRTSFKWIKNKFSHSFYDD 86
          GKLKKSLR SFKWIKNK SHSFYDD
Sbjct: 62 GKLKKSLRNSFKWIKNKISHSFYDD 86

[Close]

BLAST of Bhi03G001094 vs. NCBI nr
Match: PRQ49076.1 (hypothetical protein RchiOBHm_Chr2g0117891 [Rosa chinensis])

HSP 1 Score: 116.3 bits (290), Expect = 5.0e-23
Identity = 59/94 (62.77%), Postives = 70/94 (74.47%), Query Frame = 0


Query: 1  MERSKTFSGSYSKAYGDVRFGFEDNPKSYSFNGTVNKED---------VANPELKRRQRV 60
          ME+SK+FSG YS AY + RFGFED PKSYSFNG V+K +          +NPEL+RR+RV
Sbjct: 1  MEKSKSFSGYYSTAYTEARFGFEDRPKSYSFNGPVSKVEGPSSASGSGNSNPELERRKRV 60

Query: 61 ATYNMYSMEGKLKKSLRTSFKWIKNKFSHSFYDD 86
          A YNMY+MEGK K SLR SFKWIK KF  +FYD+
Sbjct: 61 ANYNMYTMEGKFKSSLRNSFKWIKGKFVDNFYDE 94

[Close]

BLAST of Bhi03G001094 vs. NCBI nr
Match: EXB64484.1 (hypothetical protein L484_006721 [Morus notabilis])

HSP 1 Score: 113.2 bits (282), Expect = 4.3e-22
Identity = 58/91 (63.74%), Postives = 69/91 (75.82%), Query Frame = 0


Query: 1  MERSKTFSGSYSKAYGDVRFGFEDNPKSYSFNG-TVNKED-----VANPELKRRQRVATY 60
          M+RSK+  G YS  YGD RFGFED  KSYSFNG +V  ED      +NPE+KRR+RVA Y
Sbjct: 1  MDRSKSLPGHYSSLYGDARFGFEDRAKSYSFNGPSVRVEDHELGSSSNPEMKRRKRVANY 60

Query: 61 NMYSMEGKLKKSLRTSFKWIKNKFSHSFYDD 86
          NMY+MEGKLK SLR SFKWIK+KF  ++YD+
Sbjct: 61 NMYAMEGKLKSSLRNSFKWIKSKFVDTYYDE 91

[Close]

BLAST of Bhi03G001094 vs. NCBI nr
Match: PON52269.1 (hypothetical protein TorRG33x02_308860 [Trema orientalis])

HSP 1 Score: 112.5 bits (280), Expect = 7.3e-22
Identity = 57/91 (62.64%), Postives = 66/91 (72.53%), Query Frame = 0


Query: 1  MERSKTFSGSYSKAYGDVRFGFEDNPKSYSFNGTVNK------EDVANPELKRRQRVATY 60
          MERSK+  G YS  YGD RFGFED  KSYSFNG  ++          NPE+KRR+RVA Y
Sbjct: 1  MERSKSLPGHYSSLYGDGRFGFEDRSKSYSFNGPSSQAADDEFASSGNPEMKRRKRVAAY 60

Query: 61 NMYSMEGKLKKSLRTSFKWIKNKFSHSFYDD 86
          NMY+MEGKLK SLR SFKWIK+KF  ++YDD
Sbjct: 61 NMYAMEGKLKSSLRNSFKWIKSKFVDTYYDD 91

[Close]

BLAST of Bhi03G001094 vs. NCBI nr
Match: PQQ04792.1 (hypothetical protein Pyn_34180 [Prunus yedoensis var. nudiflora] >PQQ17742.1 hypothetical protein Pyn_37360 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 110.2 bits (274), Expect = 3.6e-21
Identity = 56/92 (60.87%), Postives = 67/92 (72.83%), Query Frame = 0


Query: 1  MERSKTFSGSYSKAYGDVRFGFEDNPKSYSFNGTVNKEDV-------ANPELKRRQRVAT 60
          ME+SK+FSG YS  Y + RFGFED  KSYSFNG V+   V        NPEL+RR+RVA+
Sbjct: 1  MEKSKSFSGYYSTGYTEARFGFEDRSKSYSFNGPVSCSKVDELSSTSGNPELERRKRVAS 60

Query: 61 YNMYSMEGKLKKSLRTSFKWIKNKFSHSFYDD 86
          YNMY++EGK K SLR SFKWIK KF  +FYD+
Sbjct: 61 YNMYAVEGKFKSSLRNSFKWIKGKFVDNFYDE 92

The following BLAST results are available for this feature:

BLAST of Bhi03G001094 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi03G001094 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G09890.1	3.4e-13	47.50	Protein of unknown function (DUF3511)	[more]
AT5G11970.1	2.5e-08	39.19	Protein of unknown function (DUF3511)	[more]
AT2G19460.1	1.2e-07	42.86	Protein of unknown function (DUF3511)	[more]
AT3G05725.1	3.6e-07	50.00	Protein of unknown function (DUF3511)	[more]
AT3G62640.1	3.1e-06	48.65	Protein of unknown function (DUF3511)	[more]

BLAST of Bhi03G001094 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KFC2\|A0A0A0KFC2_CUCSA	1.5e-36	91.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486830 PE=4 SV=1	[more]
tr\|A0A2P6RRL4\|A0A2P6RRL4_ROSCH	3.3e-23	62.77	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0117891 PE=4...	[more]
tr\|W9RA26\|W9RA26_9ROSA	2.8e-22	63.74	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_006721 PE=4 SV=1	[more]
tr\|A0A2P5BU01\|A0A2P5BU01_9ROSA	4.8e-22	62.64	Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_308860 PE=4 S...	[more]
tr\|M5W4U3\|M5W4U3_PRUPE	6.9e-21	59.78	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G166900 PE=4 SV=1	[more]

BLAST of Bhi03G001094 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN48410.1	2.3e-36	91.76	hypothetical protein Csa_6G486830 [Cucumis sativus]	[more]
PRQ49076.1	5.0e-23	62.77	hypothetical protein RchiOBHm_Chr2g0117891 [Rosa chinensis]	[more]
EXB64484.1	4.3e-22	63.74	hypothetical protein L484_006721 [Morus notabilis]	[more]
PON52269.1	7.3e-22	62.64	hypothetical protein TorRG33x02_308860 [Trema orientalis]	[more]
PQQ04792.1	3.6e-21	60.87	hypothetical protein Pyn_34180 [Prunus yedoensis var. nudiflora] >PQQ17742.1 hyp...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021899	DUF3511

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi03M001094	Bhi03M001094	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021899	Protein of unknown function DUF3511	PFAM	PF12023	DUF3511	coord: 41..83 e-value: 2.0E-22 score: 78.6
None	No IPR available	PANTHER	PTHR33193	FAMILY NOT NAMED	coord: 1..85
None	No IPR available	PANTHER	PTHR33193:SF7	SUBFAMILY NOT NAMED	coord: 1..85

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi03G001094	CsGy6G026370	Cucumber (Gy14) v2	cgybwgoB593

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None