Bhi03G000346 (gene) Wax gourd

NameBhi03G000346
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionATP synthase subunit C family protein
Locationchr3 : 9003730 .. 9004074 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGGATGGATAGCTGGTCATGGTAACCAAGGCGATACCTCTTCTGAGTGGTTTACTTATACAGAAGAAAAATCGGCCAGTTCCAAGCGTAGTAGAAGTACCTCATCGGTCAATCAACCAGAACAAGCTAGGCCTTCCAATGTCGTACCCGGCCCCCAACCCATTGCTGCCCCAGTAGCTCAACAACGAAATCACCTAGATCAAACAAATGGTGAAGGTGAGAATCCATTGAATGCTGAAAGGGAGGCTAGGGCACAAGAAGAAAACGCTCGCATCTATGCCGTGATTGAGGCTATCACAAACGCCTGCGAGAATGAGGAGGCGTTCTTAGGTTGTTCGTGA

mRNA sequence

ATGTTGGGATGGATAGCTGGTCATGGTAACCAAGGCGATACCTCTTCTGAGTGGTTTACTTATACAGAAGAAAAATCGGCCAGTTCCAAGCGTAGTAGAAGTACCTCATCGGTCAATCAACCAGAACAAGCTAGGCCTTCCAATGTCGTACCCGGCCCCCAACCCATTGCTGCCCCAGTAGCTCAACAACGAAATCACCTAGATCAAACAAATGGTGAAGGTGAGAATCCATTGAATGCTGAAAGGGAGGCTAGGGCACAAGAAGAAAACGCTCGCATCTATGCCGTGATTGAGGCTATCACAAACGCCTGCGAGAATGAGGAGGCGTTCTTAGGTTGTTCGTGA

Coding sequence (CDS)

ATGTTGGGATGGATAGCTGGTCATGGTAACCAAGGCGATACCTCTTCTGAGTGGTTTACTTATACAGAAGAAAAATCGGCCAGTTCCAAGCGTAGTAGAAGTACCTCATCGGTCAATCAACCAGAACAAGCTAGGCCTTCCAATGTCGTACCCGGCCCCCAACCCATTGCTGCCCCAGTAGCTCAACAACGAAATCACCTAGATCAAACAAATGGTGAAGGTGAGAATCCATTGAATGCTGAAAGGGAGGCTAGGGCACAAGAAGAAAACGCTCGCATCTATGCCGTGATTGAGGCTATCACAAACGCCTGCGAGAATGAGGAGGCGTTCTTAGGTTGTTCGTGA

Protein sequence

MLGWIAGHGNQGDTSSEWFTYTEEKSASSKRSRSTSSVNQPEQARPSNVVPGPQPIAAPVAQQRNHLDQTNGEGENPLNAEREARAQEENARIYAVIEAITNACENEEAFLGCS
BLAST of Bhi03G000346 vs. Swiss-Prot
Match: sp|P93278|M040_ARATH (Uncharacterized ATP synthase C chain-like protein OS=Arabidopsis thaliana OX=3702 GN=AtMg00040 PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.2e-16
Identity = 57/103 (55.34%), Postives = 70/103 (67.96%), Query Frame = 0

Query: 10  NQGDTSSEWFTYTEEKSASSKRSRSTSSVNQP---EQARPSNVVPGPQPIAAPVAQQRNH 69
           N   + SEWFTYT +   S+   R++SSVNQP   EQA PSN +  P+P A+PVAQQ++H
Sbjct: 138 NGASSYSEWFTYTSDLEDSASSGRTSSSVNQPIQREQAGPSNAL--PEPAASPVAQQQDH 197

Query: 70  LDQTNGEGENPLNAEREARAQEENARIYAVIEAITNACENEEA 110
           LDQ  GEG      EREARAQE + RI A +E IT+ACEN EA
Sbjct: 198 LDQPFGEG-----GEREARAQEHD-RISAEVETITSACENLEA 232

BLAST of Bhi03G000346 vs. TAIR10
Match: ATMG00040.1 (ATP synthase subunit C family protein)

HSP 1 Score: 85.5 bits (210), Expect = 2.3e-17
Identity = 57/103 (55.34%), Postives = 70/103 (67.96%), Query Frame = 0

Query: 10  NQGDTSSEWFTYTEEKSASSKRSRSTSSVNQP---EQARPSNVVPGPQPIAAPVAQQRNH 69
           N   + SEWFTYT +   S+   R++SSVNQP   EQA PSN +  P+P A+PVAQQ++H
Sbjct: 138 NGASSYSEWFTYTSDLEDSASSGRTSSSVNQPIQREQAGPSNAL--PEPAASPVAQQQDH 197

Query: 70  LDQTNGEGENPLNAEREARAQEENARIYAVIEAITNACENEEA 110
           LDQ  GEG      EREARAQE + RI A +E IT+ACEN EA
Sbjct: 198 LDQPFGEG-----GEREARAQEHD-RISAEVETITSACENLEA 232

BLAST of Bhi03G000346 vs. TAIR10
Match: ATMG01090.1 (ATP synthase 9 mitochondrial)

HSP 1 Score: 42.4 bits (98), Expect = 2.2e-04
Identity = 46/110 (41.82%), Postives = 52/110 (47.27%), Query Frame = 0

Query: 3   GWIAGHGNQGDTSSEWFTYTE---EKSASSKRSRSTSSVNQPEQARPSNVVPGPQPIAAP 62
           G I  H  Q   SSEWFTYT    E SASS   R++SSVNQP        +P  Q     
Sbjct: 107 GGIVNH--QDGASSEWFTYTSDMVEDSASS--GRTSSSVNQP--------IPEEQA---- 166

Query: 63  VAQQRNHLDQTNGEGENPLNAEREARAQEENARIYAVIEAITNACENEEA 110
                                EREARAQE + RI A +E IT+ACEN EA
Sbjct: 167 --------------------WEREARAQEHD-RISAEVETITSACENLEA 179

BLAST of Bhi03G000346 vs. TrEMBL
Match: tr|A0A088BEZ0|A0A088BEZ0_ERUSA (Orf314 OS=Eruca sativa OX=29727 GN=orf314 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.5e-15
Identity = 60/103 (58.25%), Postives = 68/103 (66.02%), Query Frame = 0

Query: 10  NQGDTSSEWFTYTEEKSASSKRSRSTSSVNQP---EQARPSNVVPGPQPIAAPVAQQRNH 69
           +Q + SS+WFTYT +    S  S  +SSVNQP   EQA PSN  P PQP AAP AQQ+NH
Sbjct: 138 HQTEASSQWFTYTSDMLEDSDSSGRSSSVNQPIQREQAGPSNAFPAPQPTAAPAAQQQNH 197

Query: 70  LDQTNGEGENPLNAEREARAQEENARIYAVIEAITNACENEEA 110
           LDQ  G        EREARAQ E+ARI A IE I +ACENEEA
Sbjct: 198 LDQPAG--------EREARAQ-EHARISAEIERIFSACENEEA 231

BLAST of Bhi03G000346 vs. TrEMBL
Match: tr|Q6YSK6|Q6YSK6_BRANA (Uncharacterized protein orf286 OS=Brassica napus OX=3708 GN=orf286 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.6e-15
Identity = 60/103 (58.25%), Postives = 67/103 (65.05%), Query Frame = 0

Query: 10  NQGDTSSEWFTYTEEKSASSKRSRSTSSVNQP---EQARPSNVVPGPQPIAAPVAQQRNH 69
           +Q + SS+WFTYT +    S  S  +SSVNQP   EQA PSN  P PQP AAP AQQ+NH
Sbjct: 110 HQTEASSQWFTYTSDMLEDSASSGRSSSVNQPIQREQAGPSNAFPAPQPTAAPAAQQQNH 169

Query: 70  LDQTNGEGENPLNAEREARAQEENARIYAVIEAITNACENEEA 110
           LDQ  G        EREARAQ E+ARI A IE I  ACENEEA
Sbjct: 170 LDQPAG--------EREARAQ-EHARISAEIERIMAACENEEA 203

BLAST of Bhi03G000346 vs. TrEMBL
Match: tr|F8K8P6|F8K8P6_BRANA (ORF293 OS=Brassica napus OX=3708 GN=orf293 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.6e-15
Identity = 60/103 (58.25%), Postives = 67/103 (65.05%), Query Frame = 0

Query: 10  NQGDTSSEWFTYTEEKSASSKRSRSTSSVNQP---EQARPSNVVPGPQPIAAPVAQQRNH 69
           +Q + SS+WFTYT +    S  S  +SSVNQP   EQA PSN  P PQP AAP AQQ+NH
Sbjct: 117 HQTEASSQWFTYTSDMLEDSASSGRSSSVNQPIQREQAGPSNAFPAPQPTAAPAAQQQNH 176

Query: 70  LDQTNGEGENPLNAEREARAQEENARIYAVIEAITNACENEEA 110
           LDQ  G        EREARAQ E+ARI A IE I  ACENEEA
Sbjct: 177 LDQPAG--------EREARAQ-EHARISAEIERIMAACENEEA 210

BLAST of Bhi03G000346 vs. TrEMBL
Match: tr|A0A068BCT4|A0A068BCT4_BRAOB (Orf287 OS=Brassica oleracea var. botrytis OX=3715 GN=orf287 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.6e-15
Identity = 60/103 (58.25%), Postives = 67/103 (65.05%), Query Frame = 0

Query: 10  NQGDTSSEWFTYTEEKSASSKRSRSTSSVNQP---EQARPSNVVPGPQPIAAPVAQQRNH 69
           +Q + SS+WFTYT +    S  S  +SSVNQP   EQA PSN  P PQP AAP AQQ+NH
Sbjct: 111 HQTEASSQWFTYTSDMLEDSASSGRSSSVNQPIQREQAGPSNAFPAPQPTAAPAAQQQNH 170

Query: 70  LDQTNGEGENPLNAEREARAQEENARIYAVIEAITNACENEEA 110
           LDQ  G        EREARAQ E+ARI A IE I  ACENEEA
Sbjct: 171 LDQPAG--------EREARAQ-EHARISAEIERIMAACENEEA 204

BLAST of Bhi03G000346 vs. TrEMBL
Match: tr|A0A0U1YJ10|A0A0U1YJ10_BRANI (Uncharacterized protein OS=Brassica nigra OX=3710 GN=orf288 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.6e-15
Identity = 63/116 (54.31%), Postives = 70/116 (60.34%), Query Frame = 0

Query: 4   WIAGHGNQG-------DTSSEWFTYTEEKSASSKRSRSTSSVNQP---EQARPSNVVPGP 63
           W A  G+ G       + SS+WFTYT +    S  S  +SSVNQP   EQA PSN  P P
Sbjct: 99  WAAFSGSSGEVVNHQTEASSQWFTYTSDMLEDSASSGRSSSVNQPIQREQAGPSNAFPAP 158

Query: 64  QPIAAPVAQQRNHLDQTNGEGENPLNAEREARAQEENARIYAVIEAITNACENEEA 110
           QP AAP AQQ+NHLDQ  G        EREARAQ E+ARI A IE I  ACENEEA
Sbjct: 159 QPTAAPAAQQQNHLDQPAG--------EREARAQ-EHARISAEIERIMAACENEEA 205

BLAST of Bhi03G000346 vs. NCBI nr
Match: AGY62836.1 (orf314 (mitochondrion) [Eruca vesicaria subsp. sativa])

HSP 1 Score: 91.3 bits (225), Expect = 2.3e-15
Identity = 60/103 (58.25%), Postives = 68/103 (66.02%), Query Frame = 0

Query: 10  NQGDTSSEWFTYTEEKSASSKRSRSTSSVNQP---EQARPSNVVPGPQPIAAPVAQQRNH 69
           +Q + SS+WFTYT +    S  S  +SSVNQP   EQA PSN  P PQP AAP AQQ+NH
Sbjct: 138 HQTEASSQWFTYTSDMLEDSDSSGRSSSVNQPIQREQAGPSNAFPAPQPTAAPAAQQQNH 197

Query: 70  LDQTNGEGENPLNAEREARAQEENARIYAVIEAITNACENEEA 110
           LDQ  G        EREARAQ E+ARI A IE I +ACENEEA
Sbjct: 198 LDQPAG--------EREARAQ-EHARISAEIERIFSACENEEA 231

BLAST of Bhi03G000346 vs. NCBI nr
Match: YP_004927826.1 (orf293 (mitochondrion) [Brassica rapa subsp. oleifera] >YP_004927729.1 orf293 (mitochondrion) [Brassica juncea] >AEH43403.1 orf293 (mitochondrion) [Brassica rapa subsp. oleifera] >AEH43618.1 orf293 (mitochondrion) [Brassica juncea] >CBX48327.1 unnamed protein product [Brassica napus] >AIZ06157.1 hypothetical protein (mitochondrion) [Brassica napus] >AIZ06232.1 hypothetical protein (mitochondrion) [Brassica napus])

HSP 1 Score: 90.5 bits (223), Expect = 4.0e-15
Identity = 60/103 (58.25%), Postives = 67/103 (65.05%), Query Frame = 0

Query: 10  NQGDTSSEWFTYTEEKSASSKRSRSTSSVNQP---EQARPSNVVPGPQPIAAPVAQQRNH 69
           +Q + SS+WFTYT +    S  S  +SSVNQP   EQA PSN  P PQP AAP AQQ+NH
Sbjct: 117 HQTEASSQWFTYTSDMLEDSASSGRSSSVNQPIQREQAGPSNAFPAPQPTAAPAAQQQNH 176

Query: 70  LDQTNGEGENPLNAEREARAQEENARIYAVIEAITNACENEEA 110
           LDQ  G        EREARAQ E+ARI A IE I  ACENEEA
Sbjct: 177 LDQPAG--------EREARAQ-EHARISAEIERIMAACENEEA 210

BLAST of Bhi03G000346 vs. NCBI nr
Match: AIC83252.1 (orf287 (mitochondrion) [Brassica oleracea var. botrytis])

HSP 1 Score: 90.5 bits (223), Expect = 4.0e-15
Identity = 60/103 (58.25%), Postives = 67/103 (65.05%), Query Frame = 0

Query: 10  NQGDTSSEWFTYTEEKSASSKRSRSTSSVNQP---EQARPSNVVPGPQPIAAPVAQQRNH 69
           +Q + SS+WFTYT +    S  S  +SSVNQP   EQA PSN  P PQP AAP AQQ+NH
Sbjct: 111 HQTEASSQWFTYTSDMLEDSASSGRSSSVNQPIQREQAGPSNAFPAPQPTAAPAAQQQNH 170

Query: 70  LDQTNGEGENPLNAEREARAQEENARIYAVIEAITNACENEEA 110
           LDQ  G        EREARAQ E+ARI A IE I  ACENEEA
Sbjct: 171 LDQPAG--------EREARAQ-EHARISAEIERIMAACENEEA 204

BLAST of Bhi03G000346 vs. NCBI nr
Match: YP_717106.1 (hypothetical protein BrnapMp007 [Brassica napus] >BAC98854.1 hypothetical protein (mitochondrion) [Brassica napus] >AKD00166.1 hypothetical protein (mitochondrion) [Brassica napus])

HSP 1 Score: 90.5 bits (223), Expect = 4.0e-15
Identity = 60/103 (58.25%), Postives = 67/103 (65.05%), Query Frame = 0

Query: 10  NQGDTSSEWFTYTEEKSASSKRSRSTSSVNQP---EQARPSNVVPGPQPIAAPVAQQRNH 69
           +Q + SS+WFTYT +    S  S  +SSVNQP   EQA PSN  P PQP AAP AQQ+NH
Sbjct: 110 HQTEASSQWFTYTSDMLEDSASSGRSSSVNQPIQREQAGPSNAFPAPQPTAAPAAQQQNH 169

Query: 70  LDQTNGEGENPLNAEREARAQEENARIYAVIEAITNACENEEA 110
           LDQ  G        EREARAQ E+ARI A IE I  ACENEEA
Sbjct: 170 LDQPAG--------EREARAQ-EHARISAEIERIMAACENEEA 203

BLAST of Bhi03G000346 vs. NCBI nr
Match: XP_022570430.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111213045 [Brassica napus])

HSP 1 Score: 90.5 bits (223), Expect = 4.0e-15
Identity = 60/103 (58.25%), Postives = 67/103 (65.05%), Query Frame = 0

Query: 10  NQGDTSSEWFTYTEEKSASSKRSRSTSSVNQP---EQARPSNVVPGPQPIAAPVAQQRNH 69
           +Q + SS+WFTYT +    S  S  +SSVNQP   EQA PSN  P PQP AAP AQQ+NH
Sbjct: 117 HQTEASSQWFTYTSDMLEDSASSGRSSSVNQPIQREQAGPSNAFPAPQPTAAPAAQQQNH 176

Query: 70  LDQTNGEGENPLNAEREARAQEENARIYAVIEAITNACENEEA 110
           LDQ  G        EREARAQ E+ARI A IE I  ACENEEA
Sbjct: 177 LDQPAG--------EREARAQ-EHARISAEIERIMAACENEEA 210

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
sp|P93278|M040_ARATH4.2e-1655.34Uncharacterized ATP synthase C chain-like protein OS=Arabidopsis thaliana OX=370... [more]
Match NameE-valueIdentityDescription
ATMG00040.12.3e-1755.34ATP synthase subunit C family protein[more]
ATMG01090.12.2e-0441.82ATP synthase 9 mitochondrial[more]
Match NameE-valueIdentityDescription
tr|A0A088BEZ0|A0A088BEZ0_ERUSA1.5e-1558.25Orf314 OS=Eruca sativa OX=29727 GN=orf314 PE=4 SV=1[more]
tr|Q6YSK6|Q6YSK6_BRANA2.6e-1558.25Uncharacterized protein orf286 OS=Brassica napus OX=3708 GN=orf286 PE=4 SV=1[more]
tr|F8K8P6|F8K8P6_BRANA2.6e-1558.25ORF293 OS=Brassica napus OX=3708 GN=orf293 PE=4 SV=1[more]
tr|A0A068BCT4|A0A068BCT4_BRAOB2.6e-1558.25Orf287 OS=Brassica oleracea var. botrytis OX=3715 GN=orf287 PE=4 SV=1[more]
tr|A0A0U1YJ10|A0A0U1YJ10_BRANI2.6e-1554.31Uncharacterized protein OS=Brassica nigra OX=3710 GN=orf288 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AGY62836.12.3e-1558.25orf314 (mitochondrion) [Eruca vesicaria subsp. sativa][more]
YP_004927826.14.0e-1558.25orf293 (mitochondrion) [Brassica rapa subsp. oleifera] >YP_004927729.1 orf293 (m... [more]
AIC83252.14.0e-1558.25orf287 (mitochondrion) [Brassica oleracea var. botrytis][more]
YP_717106.14.0e-1558.25hypothetical protein BrnapMp007 [Brassica napus] >BAC98854.1 hypothetical protei... [more]
XP_022570430.14.0e-1558.25LOW QUALITY PROTEIN: uncharacterized protein LOC111213045 [Brassica napus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044237 cellular metabolic process
biological_process GO:1902600 hydrogen ion transmembrane transport
cellular_component GO:0031966 mitochondrial membrane
cellular_component GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o)
molecular_function GO:0003824 catalytic activity
molecular_function GO:0015078 hydrogen ion transmembrane transporter activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi03M000346Bhi03M000346mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..47

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi03G000346Cucumber (Gy14) v1cgywgoB026
Bhi03G000346Cucumber (Gy14) v1cgywgoB230
Bhi03G000346Cucumber (Gy14) v2cgybwgoB020
Bhi03G000346Cucumber (Gy14) v2cgybwgoB598
Bhi03G000346Cucurbita maxima (Rimu)cmawgoB0246
Bhi03G000346Cucurbita maxima (Rimu)cmawgoB0517
Bhi03G000346Cucurbita maxima (Rimu)cmawgoB0788
Bhi03G000346Cucurbita maxima (Rimu)cmawgoB1058
Bhi03G000346Cucurbita moschata (Rifu)cmowgoB0240
Bhi03G000346Cucurbita pepo (Zucchini)cpewgoB0097
Bhi03G000346Cucurbita moschata (Rifu)cmowgoB0514
Bhi03G000346Cucurbita moschata (Rifu)cmowgoB0781
Bhi03G000346Cucurbita moschata (Rifu)cmowgoB1051
Bhi03G000346Cucurbita pepo (Zucchini)cpewgoB0034
Bhi03G000346Cucurbita pepo (Zucchini)cpewgoB0607
Bhi03G000346Cucurbita pepo (Zucchini)cpewgoB0632
Bhi03G000346Wild cucumber (PI 183967)cpiwgoB023
Bhi03G000346Wild cucumber (PI 183967)cpiwgoB634
Bhi03G000346Cucumber (Chinese Long) v3cucwgoB026
Bhi03G000346Cucumber (Chinese Long) v3cucwgoB648
Bhi03G000346Cucumber (Chinese Long) v2cuwgoB023
Bhi03G000346Cucumber (Chinese Long) v2cuwgoB628
Bhi03G000346Bottle gourd (USVL1VR-Ls)lsiwgoB168
Bhi03G000346Bottle gourd (USVL1VR-Ls)lsiwgoB234
Bhi03G000346Melon (DHL92) v3.6.1medwgoB159
Bhi03G000346Melon (DHL92) v3.6.1medwgoB641
Bhi03G000346Melon (DHL92) v3.5.1mewgoB156
Bhi03G000346Melon (DHL92) v3.5.1mewgoB635
Bhi03G000346Watermelon (Charleston Gray)wcgwgoB227
Bhi03G000346Watermelon (Charleston Gray)wcgwgoB335
Bhi03G000346Watermelon (97103) v2wgowmbB402
Bhi03G000346Watermelon (97103) v2wgowmbB421
Bhi03G000346Watermelon (97103) v1wgowmB420
Bhi03G000346Watermelon (97103) v1wgowmB432
Bhi03G000346Silver-seed gourdcarwgoB0189
Bhi03G000346Silver-seed gourdcarwgoB0759
Bhi03G000346Silver-seed gourdcarwgoB1075
Bhi03G000346Silver-seed gourdcarwgoB1098