Bhi03G000255 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi03G000255
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Unknown protein
Location	chr3 : 6897156 .. 6897778 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTAAAACTCTCAAAATTTTCTGGTTAATTGACGCGATAGATATCATATTAATGCTGTGTAAGAGGACAAATTCTGAATTATTTAAGTTGAACCAATAAATTCGGTTGGGAATGATTCAGATTAAAAAAGTAAAGATGGTTTTGGCGAGTATAAAAACCTGCCATATCCCAAGACTACTTAACACATCGCTACAAACTATTGCTTCAAATACTAACATATATTATACAGCAATGGCCAAGATTAGCTTGTGGGTCTGCCTGATCTTGTTGGCCTCCTACTGTTTTGCAGGGTCTGAATCTCGACTACTTGAACCAAAATTTGAGGCTAAGTCTTATCGGCTAGCTCTGTTGGGTTCCAGAGACAACTTTCACATTGGGCTGATCGCTGTCGAAGGCTCAGGTAGCATCCATCAACGTGGGGTGGCACGCCTGTCACCGGGAGGCCCCGATCCGCGCCACCATTAATCTTCAGAATCCATCCCCATGTGTGGTGTAAGTGAAGTTAGTCGAGCAGGCTCGAATTCTGTTGTAACTGTTTGTTACTGTTGGGCTGCACCAGATACGTGCAGTCACTTTTTTTTTTTCAATACTGAGGCTTGGATGGTTGATAGTTTCAAATTATC

mRNA sequence

TTTAAAACTCTCAAAATTTTCTGGTTAATTGACGCGATAGATATCATATTAATGCTGTGTAAGAGGACAAATTCTGAATTATTTAAGTTGAACCAATAAATTCGGTTGGGAATGATTCAGATTAAAAAAGTAAAGATGGTTTTGGCGAGTATAAAAACCTGCCATATCCCAAGACTACTTAACACATCGCTACAAACTATTGCTTCAAATACTAACATATATTATACAGCAATGGCCAAGATTAGCTTGTGGGTCTGCCTGATCTTGTTGGCCTCCTACTGTTTTGCAGGGTCTGAATCTCGACTACTTGAACCAAAATTTGAGGCTAAGTCTTATCGGCTAGCTCTGTTGGGTTCCAGAGACAACTTTCACATTGGGCTGATCGCTGTCGAAGGCTCAGGTAGCATCCATCAACGTGGGGTGGCACGCCTGTCACCGGGAGGCCCCGATCCGCGCCACCATTAATCTTCAGAATCCATCCCCATGTGTGGTGTAAGTGAAGTTAGTCGAGCAGGCTCGAATTCTGTTGTAACTGTTTGTTACTGTTGGGCTGCACCAGATACGTGCAGTCACTTTTTTTTTTTCAATACTGAGGCTTGGATGGTTGATAGTTTCAAATTATC

Coding sequence (CDS)

ATGATTCAGATTAAAAAAGTAAAGATGGTTTTGGCGAGTATAAAAACCTGCCATATCCCAAGACTACTTAACACATCGCTACAAACTATTGCTTCAAATACTAACATATATTATACAGCAATGGCCAAGATTAGCTTGTGGGTCTGCCTGATCTTGTTGGCCTCCTACTGTTTTGCAGGGTCTGAATCTCGACTACTTGAACCAAAATTTGAGGCTAAGTCTTATCGGCTAGCTCTGTTGGGTTCCAGAGACAACTTTCACATTGGGCTGATCGCTGTCGAAGGCTCAGGTAGCATCCATCAACGTGGGGTGGCACGCCTGTCACCGGGAGGCCCCGATCCGCGCCACCATTAA

Protein sequence

MIQIKKVKMVLASIKTCHIPRLLNTSLQTIASNTNIYYTAMAKISLWVCLILLASYCFAGSESRLLEPKFEAKSYRLALLGSRDNFHIGLIAVEGSGSIHQRGVARLSPGGPDPRHH

Homology

[Close]

BLAST of Bhi03G000255 vs. TrEMBL
Match: tr|A0A0A0KNI4|A0A0A0KNI4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518900 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 5.1e-30
Identity = 67/77 (87.01%), Postives = 72/77 (93.51%), Query Frame = 0


Query: 41  MAKISLWVCLILLASYCFAGSESRLLEPKFEAKSYRLALLGSRDNFHIGLIAVEGSGSIH 100
           MAK+SLWVCLIL+ASYCFAGSESR LEPK  AKS+R ALLGSRDNFHIG++AVEGSGSI 
Sbjct: 1   MAKLSLWVCLILVASYCFAGSESRQLEPKLAAKSHRPALLGSRDNFHIGMVAVEGSGSIP 60

Query: 101 QRGVARLSPGGPDPRHH 118
           QRGVARLSPGGPDPRHH
Sbjct: 61  QRGVARLSPGGPDPRHH 77

[Close]

BLAST of Bhi03G000255 vs. TrEMBL
Match: tr|A0A0A0KLM5|A0A0A0KLM5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518910 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 4.9e-17
Identity = 54/80 (67.50%), Postives = 60/80 (75.00%), Query Frame = 0


Query: 41  MAK-ISLWVCLILLASYCFAGSESRLLE-PKFEAKSYRLALLGSRDNFHIGLIA-VEGSG 100
           MAK   LWVCLILLASY FA S SRLL+   FEAKSY+ ALLGS+ NF + L+A VE  G
Sbjct: 46  MAKYFRLWVCLILLASYYFAASNSRLLQSADFEAKSYKPALLGSKHNFQLALVAVVEDFG 105

Query: 101 SIHQRGVARLSPGGPDPRHH 118
           +IHQR  AR SPGGPDP HH
Sbjct: 106 TIHQREAARQSPGGPDPHHH 125

[Close]

BLAST of Bhi03G000255 vs. NCBI nr
Match: KGN49286.1 (hypothetical protein Csa_6G518900 [Cucumis sativus])

HSP 1 Score: 139.4 bits (350), Expect = 7.6e-30
Identity = 67/77 (87.01%), Postives = 72/77 (93.51%), Query Frame = 0


Query: 41  MAKISLWVCLILLASYCFAGSESRLLEPKFEAKSYRLALLGSRDNFHIGLIAVEGSGSIH 100
           MAK+SLWVCLIL+ASYCFAGSESR LEPK  AKS+R ALLGSRDNFHIG++AVEGSGSI 
Sbjct: 1   MAKLSLWVCLILVASYCFAGSESRQLEPKLAAKSHRPALLGSRDNFHIGMVAVEGSGSIP 60

Query: 101 QRGVARLSPGGPDPRHH 118
           QRGVARLSPGGPDPRHH
Sbjct: 61  QRGVARLSPGGPDPRHH 77

[Close]

BLAST of Bhi03G000255 vs. NCBI nr
Match: KGN49287.1 (hypothetical protein Csa_6G518910 [Cucumis sativus])

HSP 1 Score: 96.3 bits (238), Expect = 7.4e-17
Identity = 54/80 (67.50%), Postives = 60/80 (75.00%), Query Frame = 0


Query: 41  MAK-ISLWVCLILLASYCFAGSESRLLE-PKFEAKSYRLALLGSRDNFHIGLIA-VEGSG 100
           MAK   LWVCLILLASY FA S SRLL+   FEAKSY+ ALLGS+ NF + L+A VE  G
Sbjct: 46  MAKYFRLWVCLILLASYYFAASNSRLLQSADFEAKSYKPALLGSKHNFQLALVAVVEDFG 105

Query: 101 SIHQRGVARLSPGGPDPRHH 118
           +IHQR  AR SPGGPDP HH
Sbjct: 106 TIHQREAARQSPGGPDPHHH 125

The following BLAST results are available for this feature:

BLAST of Bhi03G000255 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi03G000255 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi03G000255 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KNI4\|A0A0A0KNI4_CUCSA	5.1e-30	87.01	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518900 PE=4 SV=1	[more]
tr\|A0A0A0KLM5\|A0A0A0KLM5_CUCSA	4.9e-17	67.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518910 PE=4 SV=1	[more]

BLAST of Bhi03G000255 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN49286.1	7.6e-30	87.01	hypothetical protein Csa_6G518900 [Cucumis sativus]	[more]
KGN49287.1	7.4e-17	67.50	hypothetical protein Csa_6G518910 [Cucumis sativus]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi03M000255	Bhi03M000255	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi03G000255	Melon (DHL92) v3.5.1	mewgoB635
Bhi03G000255	Watermelon (Charleston Gray)	wcgwgoB227
Bhi03G000255	Watermelon (Charleston Gray)	wcgwgoB334
Bhi03G000255	Watermelon (97103) v2	wgowmbB402
Bhi03G000255	Watermelon (97103) v2	wgowmbB420
Bhi03G000255	Watermelon (97103) v1	wgowmB418
Bhi03G000255	Watermelon (97103) v1	wgowmB432
Bhi03G000255	Silver-seed gourd	carwgoB0657
Bhi03G000255	Silver-seed gourd	carwgoB0759
Bhi03G000255	Silver-seed gourd	carwgoB0935
Bhi03G000255	Silver-seed gourd	carwgoB1098
Bhi03G000255	Wax gourd	wgowgoB108
Bhi03G000255	Cucumber (Gy14) v1	cgywgoB026
Bhi03G000255	Cucumber (Gy14) v1	cgywgoB438
Bhi03G000255	Cucumber (Gy14) v2	cgybwgoB019
Bhi03G000255	Cucumber (Gy14) v2	cgybwgoB598
Bhi03G000255	Cucurbita maxima (Rimu)	cmawgoB0246
Bhi03G000255	Cucurbita maxima (Rimu)	cmawgoB0800
Bhi03G000255	Cucurbita maxima (Rimu)	cmawgoB1058
Bhi03G000255	Cucurbita moschata (Rifu)	cmowgoB0240
Bhi03G000255	Cucurbita moschata (Rifu)	cmowgoB0793
Bhi03G000255	Cucurbita moschata (Rifu)	cmowgoB1051
Bhi03G000255	Cucurbita pepo (Zucchini)	cpewgoB0086
Bhi03G000255	Cucurbita pepo (Zucchini)	cpewgoB0607
Bhi03G000255	Cucurbita pepo (Zucchini)	cpewgoB0633
Bhi03G000255	Wild cucumber (PI 183967)	cpiwgoB022
Bhi03G000255	Wild cucumber (PI 183967)	cpiwgoB634
Bhi03G000255	Cucumber (Chinese Long) v3	cucwgoB025
Bhi03G000255	Cucumber (Chinese Long) v3	cucwgoB648
Bhi03G000255	Cucumber (Chinese Long) v2	cuwgoB022
Bhi03G000255	Cucumber (Chinese Long) v2	cuwgoB628
Bhi03G000255	Bottle gourd (USVL1VR-Ls)	lsiwgoB168
Bhi03G000255	Bottle gourd (USVL1VR-Ls)	lsiwgoB234
Bhi03G000255	Melon (DHL92) v3.6.1	medwgoB159
Bhi03G000255	Melon (DHL92) v3.6.1	medwgoB641
Bhi03G000255	Melon (DHL92) v3.5.1	mewgoB156