Bhi02G001738 (gene) Wax gourd

Overview
NameBhi02G001738
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionPhotosystem II D2 protein
Locationchr2 : 56717156 .. 56717652 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTTGCGGGTGTATTGGGCGCTGCTCTGCTATGCGCTATTCATGGTGCTACCGTAGAAAATACCTTATTTGAGGATGGGGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCTCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACTGGTTTATGGATGAGTGCTCTTGAAGTAGTTGGTCTAGCCCTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTATACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCATGGAAACACTCTTTAA

mRNA sequence

TTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTTGCGGGTGTATTGGGCGCTGCTCTGCTATGCGCTATTCATGGTGCTACCGTAGAAAATACCTTATTTGAGGATGGGGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCTCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACTGGTTTATGGATGAGTGCTCTTGAAGTAGTTGGTCTAGCCCTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTATACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCATGGAAACACTCTTTAA

Coding sequence (CDS)

ATGATGGGAGTTGCGGGTGTATTGGGCGCTGCTCTGCTATGCGCTATTCATGGTGCTACCGTAGAAAATACCTTATTTGAGGATGGGGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCTCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACTGGTTTATGGATGAGTGCTCTTGAAGTAGTTGGTCTAGCCCTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTATACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCATGGAAACACTCTTTAA

Protein sequence

MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANLFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALEVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPHGNTL
Homology
[Close]
BLAST of Bhi02G001738 vs. Swiss-Prot
Match: sp|Q4FFP4|PSBD_ACOAM (Photosystem II D2 protein OS=Acorus americanus OX=263995 GN=psbD PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 5.4e-83
Identity = 151/155 (97.42%), Postives = 151/155 (97.42%), Query Frame = 0 

Query: 1   MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANLFWSQIF 60
           MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTAN FWSQIF
Sbjct: 199 MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF 258

Query: 61  GVAFSNKRWLHFFMLFVPVTGLWMSALEVVGLALNLRAYDFVSQEIRAAEDPEFETFYTK 120
           GVAFSNKRWLHFFMLFVPVTGLWMSAL VVGLALNLRAYDFVSQEIRAAEDPEFETFYTK
Sbjct: 259 GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTK 318

Query: 121 NILLNEGIRAWMAAQDQPHENLIFPEEVLPHGNTL 156
           NILLNEGIRAWMAAQDQPHENLIFPEEVLP GN L
Sbjct: 319 NILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353

[Close]
BLAST of Bhi02G001738 vs. Swiss-Prot
Match: sp|Q3V539|PSBD_ACOCL (Photosystem II D2 protein OS=Acorus calamus OX=4465 GN=psbD PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 5.4e-83
Identity = 151/155 (97.42%), Postives = 151/155 (97.42%), Query Frame = 0 

Query: 1   MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANLFWSQIF 60
           MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTAN FWSQIF
Sbjct: 199 MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF 258

Query: 61  GVAFSNKRWLHFFMLFVPVTGLWMSALEVVGLALNLRAYDFVSQEIRAAEDPEFETFYTK 120
           GVAFSNKRWLHFFMLFVPVTGLWMSAL VVGLALNLRAYDFVSQEIRAAEDPEFETFYTK
Sbjct: 259 GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTK 318

Query: 121 NILLNEGIRAWMAAQDQPHENLIFPEEVLPHGNTL 156
           NILLNEGIRAWMAAQDQPHENLIFPEEVLP GN L
Sbjct: 319 NILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353

[Close]
BLAST of Bhi02G001738 vs. Swiss-Prot
Match: sp|A4QJB0|PSBD_AETCO (Photosystem II D2 protein OS=Aethionema cordifolium OX=434059 GN=psbD PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 5.4e-83
Identity = 151/155 (97.42%), Postives = 151/155 (97.42%), Query Frame = 0 

Query: 1   MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANLFWSQIF 60
           MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTAN FWSQIF
Sbjct: 199 MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF 258

Query: 61  GVAFSNKRWLHFFMLFVPVTGLWMSALEVVGLALNLRAYDFVSQEIRAAEDPEFETFYTK 120
           GVAFSNKRWLHFFMLFVPVTGLWMSAL VVGLALNLRAYDFVSQEIRAAEDPEFETFYTK
Sbjct: 259 GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTK 318

Query: 121 NILLNEGIRAWMAAQDQPHENLIFPEEVLPHGNTL 156
           NILLNEGIRAWMAAQDQPHENLIFPEEVLP GN L
Sbjct: 319 NILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353

[Close]
BLAST of Bhi02G001738 vs. Swiss-Prot
Match: sp|A4QJJ4|PSBD_AETGR (Photosystem II D2 protein OS=Aethionema grandiflorum OX=72657 GN=psbD PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 5.4e-83
Identity = 151/155 (97.42%), Postives = 151/155 (97.42%), Query Frame = 0 

Query: 1   MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANLFWSQIF 60
           MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTAN FWSQIF
Sbjct: 199 MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF 258

Query: 61  GVAFSNKRWLHFFMLFVPVTGLWMSALEVVGLALNLRAYDFVSQEIRAAEDPEFETFYTK 120
           GVAFSNKRWLHFFMLFVPVTGLWMSAL VVGLALNLRAYDFVSQEIRAAEDPEFETFYTK
Sbjct: 259 GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTK 318

Query: 121 NILLNEGIRAWMAAQDQPHENLIFPEEVLPHGNTL 156
           NILLNEGIRAWMAAQDQPHENLIFPEEVLP GN L
Sbjct: 319 NILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353

[Close]
BLAST of Bhi02G001738 vs. Swiss-Prot
Match: sp|Q70Y08|PSBD_AMBTC (Photosystem II D2 protein OS=Amborella trichopoda OX=13333 GN=psbD PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 5.4e-83
Identity = 151/155 (97.42%), Postives = 151/155 (97.42%), Query Frame = 0 

Query: 1   MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANLFWSQIF 60
           MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTAN FWSQIF
Sbjct: 199 MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF 258

Query: 61  GVAFSNKRWLHFFMLFVPVTGLWMSALEVVGLALNLRAYDFVSQEIRAAEDPEFETFYTK 120
           GVAFSNKRWLHFFMLFVPVTGLWMSAL VVGLALNLRAYDFVSQEIRAAEDPEFETFYTK
Sbjct: 259 GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTK 318

Query: 121 NILLNEGIRAWMAAQDQPHENLIFPEEVLPHGNTL 156
           NILLNEGIRAWMAAQDQPHENLIFPEEVLP GN L
Sbjct: 319 NILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353

[Close]
BLAST of Bhi02G001738 vs. TAIR10
Match: ATCG00270.1 (photosystem II reaction center protein D)

HSP 1 Score: 308.1 bits (788), Expect = 3.0e-84
Identity = 151/155 (97.42%), Postives = 151/155 (97.42%), Query Frame = 0 

Query: 1   MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANLFWSQIF 60
           MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTAN FWSQIF
Sbjct: 199 MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF 258

Query: 61  GVAFSNKRWLHFFMLFVPVTGLWMSALEVVGLALNLRAYDFVSQEIRAAEDPEFETFYTK 120
           GVAFSNKRWLHFFMLFVPVTGLWMSAL VVGLALNLRAYDFVSQEIRAAEDPEFETFYTK
Sbjct: 259 GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTK 318

Query: 121 NILLNEGIRAWMAAQDQPHENLIFPEEVLPHGNTL 156
           NILLNEGIRAWMAAQDQPHENLIFPEEVLP GN L
Sbjct: 319 NILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353

[Close]
BLAST of Bhi02G001738 vs. TAIR10
Match: ATCG00020.1 (photosystem II reaction center protein A)

HSP 1 Score: 69.3 bits (168), Expect = 2.3e-12
Identity = 38/104 (36.54%), Postives = 63/104 (60.58%), Query Frame = 0 

Query: 1   MMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEETYSMVTANLFWSQI 60
           M+GVAGV G +L  A+HG+ V ++L  E  +  +    +   Q EETY++V A+ ++ ++
Sbjct: 199 MLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRL 258

Query: 61  F--GVAFSNKRWLHFFMLFVPVTGLWMSALEVVGLALNLRAYDF 102
                +F+N R LHFF+   PV G+W +AL +  +A NL  ++F
Sbjct: 259 IFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

[Close]
BLAST of Bhi02G001738 vs. TrEMBL
Match: tr|A0A2P1AE51|A0A2P1AE51_9MAGN (Photosystem II D2 protein OS=Parrotia subaequalis OX=64134 GN=psbD PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 1.1e-80
Identity = 151/155 (97.42%), Postives = 151/155 (97.42%), Query Frame = 0 

Query: 1   MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANLFWSQIF 60
           MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTAN FWSQIF
Sbjct: 199 MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF 258

Query: 61  GVAFSNKRWLHFFMLFVPVTGLWMSALEVVGLALNLRAYDFVSQEIRAAEDPEFETFYTK 120
           GVAFSNKRWLHFFMLFVPVTGLWMSAL VVGLALNLRAYDFVSQEIRAAEDPEFETFYTK
Sbjct: 259 GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTK 318

Query: 121 NILLNEGIRAWMAAQDQPHENLIFPEEVLPHGNTL 156
           NILLNEGIRAWMAAQDQPHENLIFPEEVLP GN L
Sbjct: 319 NILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353

[Close]
BLAST of Bhi02G001738 vs. TrEMBL
Match: tr|A0A175DGZ4|A0A175DGZ4_ARALP (Photosystem II D2 protein OS=Arabidopsis lyrata subsp. petraea OX=59691 GN=psbD PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 1.1e-80
Identity = 151/155 (97.42%), Postives = 151/155 (97.42%), Query Frame = 0 

Query: 1   MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANLFWSQIF 60
           MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTAN FWSQIF
Sbjct: 199 MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF 258

Query: 61  GVAFSNKRWLHFFMLFVPVTGLWMSALEVVGLALNLRAYDFVSQEIRAAEDPEFETFYTK 120
           GVAFSNKRWLHFFMLFVPVTGLWMSAL VVGLALNLRAYDFVSQEIRAAEDPEFETFYTK
Sbjct: 259 GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTK 318

Query: 121 NILLNEGIRAWMAAQDQPHENLIFPEEVLPHGNTL 156
           NILLNEGIRAWMAAQDQPHENLIFPEEVLP GN L
Sbjct: 319 NILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353

[Close]
BLAST of Bhi02G001738 vs. TrEMBL
Match: tr|A0A059P2K5|A0A059P2K5_9GENT (Photosystem II D2 protein OS=Asclepias coulteri OX=659948 GN=psbD PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 1.1e-80
Identity = 151/155 (97.42%), Postives = 151/155 (97.42%), Query Frame = 0 

Query: 1   MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANLFWSQIF 60
           MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTAN FWSQIF
Sbjct: 199 MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF 258

Query: 61  GVAFSNKRWLHFFMLFVPVTGLWMSALEVVGLALNLRAYDFVSQEIRAAEDPEFETFYTK 120
           GVAFSNKRWLHFFMLFVPVTGLWMSAL VVGLALNLRAYDFVSQEIRAAEDPEFETFYTK
Sbjct: 259 GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTK 318

Query: 121 NILLNEGIRAWMAAQDQPHENLIFPEEVLPHGNTL 156
           NILLNEGIRAWMAAQDQPHENLIFPEEVLP GN L
Sbjct: 319 NILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353

[Close]
BLAST of Bhi02G001738 vs. TrEMBL
Match: tr|A0A0C5CGW2|A0A0C5CGW2_ACTCH (Photosystem II D2 protein OS=Actinidia chinensis OX=3625 GN=psbD PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 1.1e-80
Identity = 151/155 (97.42%), Postives = 151/155 (97.42%), Query Frame = 0 

Query: 1   MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANLFWSQIF 60
           MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTAN FWSQIF
Sbjct: 199 MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF 258

Query: 61  GVAFSNKRWLHFFMLFVPVTGLWMSALEVVGLALNLRAYDFVSQEIRAAEDPEFETFYTK 120
           GVAFSNKRWLHFFMLFVPVTGLWMSAL VVGLALNLRAYDFVSQEIRAAEDPEFETFYTK
Sbjct: 259 GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTK 318

Query: 121 NILLNEGIRAWMAAQDQPHENLIFPEEVLPHGNTL 156
           NILLNEGIRAWMAAQDQPHENLIFPEEVLP GN L
Sbjct: 319 NILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353

[Close]
BLAST of Bhi02G001738 vs. TrEMBL
Match: tr|Q4FFN9|Q4FFN9_YUCSC (Photosystem II D2 protein (Fragment) OS=Yucca schidigera OX=334597 GN=psbD PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 1.1e-80
Identity = 151/155 (97.42%), Postives = 151/155 (97.42%), Query Frame = 0 

Query: 1   MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANLFWSQIF 60
           MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTAN FWSQIF
Sbjct: 199 MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF 258

Query: 61  GVAFSNKRWLHFFMLFVPVTGLWMSALEVVGLALNLRAYDFVSQEIRAAEDPEFETFYTK 120
           GVAFSNKRWLHFFMLFVPVTGLWMSAL VVGLALNLRAYDFVSQEIRAAEDPEFETFYTK
Sbjct: 259 GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTK 318

Query: 121 NILLNEGIRAWMAAQDQPHENLIFPEEVLPHGNTL 156
           NILLNEGIRAWMAAQDQPHENLIFPEEVLP GN L
Sbjct: 319 NILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353

[Close]
BLAST of Bhi02G001738 vs. NCBI nr
Match: NP_783227.1 (photosystem II protein D2 [Atropa belladonna] >Q8S8X8.1 RecName: Full=Photosystem II D2 protein; Short=PSII D2 protein; AltName: Full=Photosystem Q(A) protein >CAC88039.1 psII D2 protein (chloroplast) [Atropa belladonna])

HSP 1 Score: 308.1 bits (788), Expect = 1.6e-80
Identity = 151/155 (97.42%), Postives = 151/155 (97.42%), Query Frame = 0 

Query: 1   MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANLFWSQIF 60
           MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTAN FWSQIF
Sbjct: 199 MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF 258

Query: 61  GVAFSNKRWLHFFMLFVPVTGLWMSALEVVGLALNLRAYDFVSQEIRAAEDPEFETFYTK 120
           GVAFSNKRWLHFFMLFVPVTGLWMSAL VVGLALNLRAYDFVSQEIRAAEDPEFETFYTK
Sbjct: 259 GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTK 318

Query: 121 NILLNEGIRAWMAAQDQPHENLIFPEEVLPHGNTL 156
           NILLNEGIRAWMAAQDQPHENLIFPEEVLP GN L
Sbjct: 319 NILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353

[Close]
BLAST of Bhi02G001738 vs. NCBI nr
Match: AAO13265.1 (photosystem II D2 protein, partial (chloroplast) [Hydrastis canadensis])

HSP 1 Score: 308.1 bits (788), Expect = 1.6e-80
Identity = 151/155 (97.42%), Postives = 151/155 (97.42%), Query Frame = 0 

Query: 1   MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANLFWSQIF 60
           MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTAN FWSQIF
Sbjct: 162 MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF 221

Query: 61  GVAFSNKRWLHFFMLFVPVTGLWMSALEVVGLALNLRAYDFVSQEIRAAEDPEFETFYTK 120
           GVAFSNKRWLHFFMLFVPVTGLWMSAL VVGLALNLRAYDFVSQEIRAAEDPEFETFYTK
Sbjct: 222 GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTK 281

Query: 121 NILLNEGIRAWMAAQDQPHENLIFPEEVLPHGNTL 156
           NILLNEGIRAWMAAQDQPHENLIFPEEVLP GN L
Sbjct: 282 NILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 316

[Close]
BLAST of Bhi02G001738 vs. NCBI nr
Match: AAQ09500.1 (photosystem II D2 protein, partial (chloroplast) [Spinacia oleracea])

HSP 1 Score: 308.1 bits (788), Expect = 1.6e-80
Identity = 151/155 (97.42%), Postives = 151/155 (97.42%), Query Frame = 0 

Query: 1   MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANLFWSQIF 60
           MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTAN FWSQIF
Sbjct: 172 MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF 231

Query: 61  GVAFSNKRWLHFFMLFVPVTGLWMSALEVVGLALNLRAYDFVSQEIRAAEDPEFETFYTK 120
           GVAFSNKRWLHFFMLFVPVTGLWMSAL VVGLALNLRAYDFVSQEIRAAEDPEFETFYTK
Sbjct: 232 GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTK 291

Query: 121 NILLNEGIRAWMAAQDQPHENLIFPEEVLPHGNTL 156
           NILLNEGIRAWMAAQDQPHENLIFPEEVLP GN L
Sbjct: 292 NILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 326

[Close]
BLAST of Bhi02G001738 vs. NCBI nr
Match: AAQ09474.1 (photosystem II D2 protein, partial (chloroplast) [Euonymus alatus])

HSP 1 Score: 308.1 bits (788), Expect = 1.6e-80
Identity = 151/155 (97.42%), Postives = 151/155 (97.42%), Query Frame = 0 

Query: 1   MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANLFWSQIF 60
           MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTAN FWSQIF
Sbjct: 172 MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF 231

Query: 61  GVAFSNKRWLHFFMLFVPVTGLWMSALEVVGLALNLRAYDFVSQEIRAAEDPEFETFYTK 120
           GVAFSNKRWLHFFMLFVPVTGLWMSAL VVGLALNLRAYDFVSQEIRAAEDPEFETFYTK
Sbjct: 232 GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTK 291

Query: 121 NILLNEGIRAWMAAQDQPHENLIFPEEVLPHGNTL 156
           NILLNEGIRAWMAAQDQPHENLIFPEEVLP GN L
Sbjct: 292 NILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 326

[Close]
BLAST of Bhi02G001738 vs. NCBI nr
Match: AAN32609.1 (photosystem II D2 protein, partial (chloroplast) [Yucca glauca])

HSP 1 Score: 308.1 bits (788), Expect = 1.6e-80
Identity = 151/155 (97.42%), Postives = 151/155 (97.42%), Query Frame = 0 

Query: 1   MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANLFWSQIF 60
           MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTAN FWSQIF
Sbjct: 172 MMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF 231

Query: 61  GVAFSNKRWLHFFMLFVPVTGLWMSALEVVGLALNLRAYDFVSQEIRAAEDPEFETFYTK 120
           GVAFSNKRWLHFFMLFVPVTGLWMSAL VVGLALNLRAYDFVSQEIRAAEDPEFETFYTK
Sbjct: 232 GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTK 291

Query: 121 NILLNEGIRAWMAAQDQPHENLIFPEEVLPHGNTL 156
           NILLNEGIRAWMAAQDQPHENLIFPEEVLP GN L
Sbjct: 292 NILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 326

The following BLAST results are available for this feature:
BLAST of Bhi02G001738 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q4FFP4|PSBD_ACOAM5.4e-8397.42Photosystem II D2 protein OS=Acorus americanus OX=263995 GN=psbD PE=3 SV=1[more]
sp|Q3V539|PSBD_ACOCL5.4e-8397.42Photosystem II D2 protein OS=Acorus calamus OX=4465 GN=psbD PE=3 SV=1[more]
sp|A4QJB0|PSBD_AETCO5.4e-8397.42Photosystem II D2 protein OS=Aethionema cordifolium OX=434059 GN=psbD PE=3 SV=1[more]
sp|A4QJJ4|PSBD_AETGR5.4e-8397.42Photosystem II D2 protein OS=Aethionema grandiflorum OX=72657 GN=psbD PE=3 SV=1[more]
sp|Q70Y08|PSBD_AMBTC5.4e-8397.42Photosystem II D2 protein OS=Amborella trichopoda OX=13333 GN=psbD PE=3 SV=1[more]
BLAST of Bhi02G001738 vs. TAIR10
Match NameE-valueIdentityDescription
ATCG00270.13.0e-8497.42photosystem II reaction center protein D[more]
ATCG00020.12.3e-1236.54photosystem II reaction center protein A[more]
BLAST of Bhi02G001738 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A2P1AE51|A0A2P1AE51_9MAGN1.1e-8097.42Photosystem II D2 protein OS=Parrotia subaequalis OX=64134 GN=psbD PE=3 SV=1[more]
tr|A0A175DGZ4|A0A175DGZ4_ARALP1.1e-8097.42Photosystem II D2 protein OS=Arabidopsis lyrata subsp. petraea OX=59691 GN=psbD ... [more]
tr|A0A059P2K5|A0A059P2K5_9GENT1.1e-8097.42Photosystem II D2 protein OS=Asclepias coulteri OX=659948 GN=psbD PE=3 SV=1[more]
tr|A0A0C5CGW2|A0A0C5CGW2_ACTCH1.1e-8097.42Photosystem II D2 protein OS=Actinidia chinensis OX=3625 GN=psbD PE=3 SV=1[more]
tr|Q4FFN9|Q4FFN9_YUCSC1.1e-8097.42Photosystem II D2 protein (Fragment) OS=Yucca schidigera OX=334597 GN=psbD PE=3 ... [more]
BLAST of Bhi02G001738 vs. NCBI nr
Match NameE-valueIdentityDescription
NP_783227.11.6e-8097.42photosystem II protein D2 [Atropa belladonna] >Q8S8X8.1 RecName: Full=Photosyste... [more]
AAO13265.11.6e-8097.42photosystem II D2 protein, partial (chloroplast) [Hydrastis canadensis][more]
AAQ09500.11.6e-8097.42photosystem II D2 protein, partial (chloroplast) [Spinacia oleracea][more]
AAQ09474.11.6e-8097.42photosystem II D2 protein, partial (chloroplast) [Euonymus alatus][more]
AAN32609.11.6e-8097.42photosystem II D2 protein, partial (chloroplast) [Yucca glauca][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009772photosynthetic electron transport in photosystem II
GO:0019684photosynthesis, light reaction
Vocabulary: Molecular Function
TermDefinition
GO:0045156electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
Vocabulary: INTERPRO
TermDefinition
IPR036854Photo_II_D1/D2_sf
IPR000484Photo_RC_L/M
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009772 photosynthetic electron transport in photosystem II
biological_process GO:0018298 protein-chromophore linkage
biological_process GO:0019684 photosynthesis, light reaction
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009523 photosystem II
molecular_function GO:0016168 chlorophyll binding
molecular_function GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
molecular_function GO:0005506 iron ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi02M001738Bhi02M001738mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000484Photosynthetic reaction centre, L/MPFAMPF00124Photo_RCcoord: 1..120
e-value: 3.4E-23
score: 82.1
IPR000484Photosynthetic reaction centre, L/MPANTHERPTHR33149FAMILY NOT NAMEDcoord: 1..149
NoneNo IPR availablePANTHERPTHR33149:SF8PHOTOSYSTEM II D2 PROTEINcoord: 1..149
IPR036854Photosystem II protein D1/D2 superfamilySUPERFAMILYSSF81483Bacterial photosystem II reaction centre, L and M subunitscoord: 1..154

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi02G001738Cucumber (Gy14) v1cgywgoB372
Bhi02G001738Cucumber (Gy14) v2cgybwgoB080
Bhi02G001738Cucurbita maxima (Rimu)cmawgoB0090
Bhi02G001738Cucurbita maxima (Rimu)cmawgoB0173
Bhi02G001738Cucurbita moschata (Rifu)cmowgoB0084
Bhi02G001738Cucurbita moschata (Rifu)cmowgoB0167
Bhi02G001738Cucurbita pepo (Zucchini)cpewgoB0462
Bhi02G001738Cucurbita pepo (Zucchini)cpewgoB0904
Bhi02G001738Wild cucumber (PI 183967)cpiwgoB084
Bhi02G001738Cucumber (Chinese Long) v3cucwgoB090
Bhi02G001738Cucumber (Chinese Long) v2cuwgoB082
Bhi02G001738Bottle gourd (USVL1VR-Ls)lsiwgoB507
Bhi02G001738Melon (DHL92) v3.6.1medwgoB295
Bhi02G001738Melon (DHL92) v3.5.1mewgoB294
Bhi02G001738Silver-seed gourdcarwgoB0314