Bhi02G001731 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi02G001731
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Unknown protein
Location	chr2 : 56701189 .. 56701581 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATTCACTAGCAAAGAAATCGTTTTTGATACCGCTCGTGGGTTCTGCACGCATTGCAGACGACAAGGTCATGCCCGTCACGAATGCAAAGTGGCGAATAAGGAACCTGGTGTCAACCCGTCACCGAAAATGGCCTATGTTCCAAGAACCAATGCTACCCAACACTACCACTGAAGTTAGCCTTCGTGATTCAGATGTTGCTGCTGCTGACATGCAAACCATTGAAGATGGTCCTCGGGGCGAAGAGCTTAAACCAGATAACAATCCCCAAGCTTCTTTCTTCAACAACGAGTATTTAGCTATTGGAAAATCGCCTTCGGTTAACGCAGCCGCCCCTAATACCGGGGTAGCTCTGCCTCATGGGGACAGCAGGAAGAGGAAAAGAGTTTAA

mRNA sequence

ATGTATTCACTAGCAAAGAAATCGTTTTTGATACCGCTCGTGGGTTCTGCACGCATTGCAGACGACAAGGTCATGCCCGTCACGAATGCAAAGTGGCGAATAAGGAACCTGGTGTCAACCCGTCACCGAAAATGGCCTATGTTCCAAGAACCAATGCTACCCAACACTACCACTGAAGTTAGCCTTCGTGATTCAGATGTTGCTGCTGCTGACATGCAAACCATTGAAGATGGTCCTCGGGGCGAAGAGCTTAAACCAGATAACAATCCCCAAGCTTCTTTCTTCAACAACGAGTATTTAGCTATTGGAAAATCGCCTTCGGTTAACGCAGCCGCCCCTAATACCGGGGTAGCTCTGCCTCATGGGGACAGCAGGAAGAGGAAAAGAGTTTAA

Coding sequence (CDS)

ATGTATTCACTAGCAAAGAAATCGTTTTTGATACCGCTCGTGGGTTCTGCACGCATTGCAGACGACAAGGTCATGCCCGTCACGAATGCAAAGTGGCGAATAAGGAACCTGGTGTCAACCCGTCACCGAAAATGGCCTATGTTCCAAGAACCAATGCTACCCAACACTACCACTGAAGTTAGCCTTCGTGATTCAGATGTTGCTGCTGCTGACATGCAAACCATTGAAGATGGTCCTCGGGGCGAAGAGCTTAAACCAGATAACAATCCCCAAGCTTCTTTCTTCAACAACGAGTATTTAGCTATTGGAAAATCGCCTTCGGTTAACGCAGCCGCCCCTAATACCGGGGTAGCTCTGCCTCATGGGGACAGCAGGAAGAGGAAAAGAGTTTAA

Protein sequence

MYSLAKKSFLIPLVGSARIADDKVMPVTNAKWRIRNLVSTRHRKWPMFQEPMLPNTTTEVSLRDSDVAAADMQTIEDGPRGEELKPDNNPQASFFNNEYLAIGKSPSVNAAAPNTGVALPHGDSRKRKRV

Homology

[Close]

BLAST of Bhi02G001731 vs. TrEMBL
Match: tr|B9T143|B9T143_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0439640 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 7.4e-14
Identity = 45/82 (54.88%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 9   FLIPLVGSARIADDKVMPVTNAKWRIRNLVSTRHRKWPMFQEPMLPNTTTEVSLRDSDVA 68
           FL   + S  I DDK     NAKW+IRNL STRHR+WPMFQEPMLP  +         + 
Sbjct: 280 FLFEYLSSVCIVDDK-----NAKWQIRNLESTRHREWPMFQEPMLPIQSIPTI---ETMP 339

Query: 69  AADMQTIEDGPRGEELKPDNNP 91
             DMQT++DGP GEE +PDNNP
Sbjct: 340 TVDMQTLKDGPWGEEREPDNNP 353

[Close]

BLAST of Bhi02G001731 vs. TrEMBL
Match: tr|B9T8X8|B9T8X8_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1985520 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.8e-13
Identity = 50/85 (58.82%), Postives = 59/85 (69.41%), Query Frame = 0


Query: 47  MFQEPMLPNTTTEVSLRDSDVAAADMQTIEDGPRGEELKPDNNPQASFF-NNEYLAIGKS 106
           MFQEPMLP  +         + AADMQTIEDGPRGEEL+PDNNPQA     +EYLAIGKS
Sbjct: 1   MFQEPMLPIRSAPTI---ETMPAADMQTIEDGPRGEELEPDNNPQAPVLKKSEYLAIGKS 60

Query: 107 PSVNAAAPNTGVALPHGDSRKRKRV 131
           PSVNAA+ NTG + P    ++ + V
Sbjct: 61  PSVNAAS-NTGGSSPSRGQQEEELV 81

[Close]

BLAST of Bhi02G001731 vs. NCBI nr
Match: EEF30423.1 (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 85.9 bits (211), Expect = 1.1e-13
Identity = 45/82 (54.88%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 9   FLIPLVGSARIADDKVMPVTNAKWRIRNLVSTRHRKWPMFQEPMLPNTTTEVSLRDSDVA 68
           FL   + S  I DDK     NAKW+IRNL STRHR+WPMFQEPMLP  +         + 
Sbjct: 280 FLFEYLSSVCIVDDK-----NAKWQIRNLESTRHREWPMFQEPMLPIQSIPTI---ETMP 339

Query: 69  AADMQTIEDGPRGEELKPDNNP 91
             DMQT++DGP GEE +PDNNP
Sbjct: 340 TVDMQTLKDGPWGEEREPDNNP 353

[Close]

BLAST of Bhi02G001731 vs. NCBI nr
Match: EEF27683.1 (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 84.0 bits (206), Expect = 4.2e-13
Identity = 50/85 (58.82%), Postives = 59/85 (69.41%), Query Frame = 0


Query: 47  MFQEPMLPNTTTEVSLRDSDVAAADMQTIEDGPRGEELKPDNNPQASFF-NNEYLAIGKS 106
           MFQEPMLP  +         + AADMQTIEDGPRGEEL+PDNNPQA     +EYLAIGKS
Sbjct: 1   MFQEPMLPIRSAPTI---ETMPAADMQTIEDGPRGEELEPDNNPQAPVLKKSEYLAIGKS 60

Query: 107 PSVNAAAPNTGVALPHGDSRKRKRV 131
           PSVNAA+ NTG + P    ++ + V
Sbjct: 61  PSVNAAS-NTGGSSPSRGQQEEELV 81

The following BLAST results are available for this feature:

BLAST of Bhi02G001731 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi02G001731 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi02G001731 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|B9T143\|B9T143_RICCO	7.4e-14	54.88	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0439640 PE=4 SV=1	[more]
tr\|B9T8X8\|B9T8X8_RICCO	2.8e-13	58.82	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1985520 PE=4 SV=1	[more]

BLAST of Bhi02G001731 vs. NCBI nr


Match Name	E-value	Identity	Description
EEF30423.1	1.1e-13	54.88	conserved hypothetical protein [Ricinus communis]	[more]
EEF27683.1	4.2e-13	58.82	conserved hypothetical protein [Ricinus communis]	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi02M001731	Bhi02M001731	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..130

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi02G001731	Cucumber (Gy14) v1	cgywgoB372
Bhi02G001731	Cucumber (Gy14) v2	cgybwgoB080
Bhi02G001731	Cucurbita maxima (Rimu)	cmawgoB0090
Bhi02G001731	Cucurbita maxima (Rimu)	cmawgoB0173
Bhi02G001731	Cucurbita moschata (Rifu)	cmowgoB0084
Bhi02G001731	Cucurbita moschata (Rifu)	cmowgoB0164
Bhi02G001731	Cucurbita moschata (Rifu)	cmowgoB0167
Bhi02G001731	Cucurbita pepo (Zucchini)	cpewgoB0462
Bhi02G001731	Cucurbita pepo (Zucchini)	cpewgoB0904
Bhi02G001731	Wild cucumber (PI 183967)	cpiwgoB084
Bhi02G001731	Cucumber (Chinese Long) v3	cucwgoB090
Bhi02G001731	Cucumber (Chinese Long) v2	cuwgoB082
Bhi02G001731	Bottle gourd (USVL1VR-Ls)	lsiwgoB507
Bhi02G001731	Melon (DHL92) v3.6.1	medwgoB295
Bhi02G001731	Melon (DHL92) v3.5.1	mewgoB294
Bhi02G001731	Silver-seed gourd	carwgoB0314