Bhi02G001672 (gene) Wax gourd

Overview
NameBhi02G001672
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionPeroxisome biogenesis protein 7
Locationchr2 : 54600682 .. 54601038 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACGGGGTTGTAATCAGCAGAGTGAACCTCGCGAGTATGTTCGTGGAAGGAACGAATGGGATTAGATGTGGGGGGAAGAGCGAGGTTGTAAAGCTTGACAGAGCTATCGGCGATGGCGGCGACGAGAAGGGAGTCGTGAGATTTGGACCAAGAGACGTCGTAGACTCCATCGGCAGTGTCGAAGGCGATGTGCTCAGATGTGGGACCGGCGGGATTGAGATTGAGGACGTGAAGTCGACCATTGCCAAGGATTCTGAAATGTTGAGCGGTGGAAACGACGATGCGGGATTCGTAGAAGGGGCTAAACTTGATGGAGTAGCCATTAAAGGGAGTCTTAAAGACGAGCATGATTGA

mRNA sequence

ATGAACGGGGTTGTAATCAGCAGAGTGAACCTCGCGAGTATGTTCGTGGAAGGAACGAATGGGATTAGATGTGGGGGGAAGAGCGAGGTTGTAAAGCTTGACAGAGCTATCGGCGATGGCGGCGACGAGAAGGGAGTCGTGAGATTTGGACCAAGAGACGTCGTAGACTCCATCGGCAGTGTCGAAGGCGATGTGCTCAGATGTGGGACCGGCGGGATTGAGATTGAGGACGTGAAGTCGACCATTGCCAAGGATTCTGAAATGTTGAGCGGTGGAAACGACGATGCGGGATTCGTAGAAGGGGCTAAACTTGATGGAGTAGCCATTAAAGGGAGTCTTAAAGACGAGCATGATTGA

Coding sequence (CDS)

ATGAACGGGGTTGTAATCAGCAGAGTGAACCTCGCGAGTATGTTCGTGGAAGGAACGAATGGGATTAGATGTGGGGGGAAGAGCGAGGTTGTAAAGCTTGACAGAGCTATCGGCGATGGCGGCGACGAGAAGGGAGTCGTGAGATTTGGACCAAGAGACGTCGTAGACTCCATCGGCAGTGTCGAAGGCGATGTGCTCAGATGTGGGACCGGCGGGATTGAGATTGAGGACGTGAAGTCGACCATTGCCAAGGATTCTGAAATGTTGAGCGGTGGAAACGACGATGCGGGATTCGTAGAAGGGGCTAAACTTGATGGAGTAGCCATTAAAGGGAGTCTTAAAGACGAGCATGATTGA

Protein sequence

MNGVVISRVNLASMFVEGTNGIRCGGKSEVVKLDRAIGDGGDEKGVVRFGPRDVVDSIGSVEGDVLRCGTGGIEIEDVKSTIAKDSEMLSGGNDDAGFVEGAKLDGVAIKGSLKDEHD
Homology
[Close]
BLAST of Bhi02G001672 vs. TrEMBL
Match: tr|A0A2P5EP52|A0A2P5EP52_9ROSA (Uncharacterized protein (Fragment) OS=Trema orientalis OX=63057 GN=TorRG33x02_169520 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.4e-11
Identity = 44/97 (45.36%), Postives = 63/97 (64.95%), Query Frame = 0 

Query: 26  GKSEVVKLDRAIGDGGDEKGVVRFGPRDVVDSIGSVEGDVLRCG-----TGGIEIEDVKS 85
           G+ EVV+LD AIG GG+++ VV  GP D+V ++G V    L  G       G E EDV++
Sbjct: 187 GQGEVVELDGAIGYGGNDEVVVGLGPGDIVHAVGGVVRGELGDGCWGGARRGGEFEDVEA 246

Query: 86  TIAKDSEMLSGGNDDAGFVEGAKLDGVAIKGSLKDEH 118
            +A D+E+L GG+ +A  VEGA+LDGVA++   +D H
Sbjct: 247 AVADDAEVLGGGDGEAVLVEGAELDGVAVEWGFEDGH 283

[Close]
BLAST of Bhi02G001672 vs. TrEMBL
Match: tr|A0A2P5DUM7|A0A2P5DUM7_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_030120 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.4e-11
Identity = 44/97 (45.36%), Postives = 66/97 (68.04%), Query Frame = 0 

Query: 26  GKSEVVKLDRAIGDGGDEKGVVRFGPRDVVDSIGS-VEGDVLRCG----TGGIEIEDVKS 85
           G+ EVV+LD AIG GG+++ VV  GP DV+ ++G  V G++   G     GG E EDV++
Sbjct: 187 GQGEVVELDGAIGYGGNDEVVVGLGPGDVIHAVGGVVRGELGDRGWGGPRGGGEFEDVEA 246

Query: 86  TIAKDSEMLSGGNDDAGFVEGAKLDGVAIKGSLKDEH 118
            +A+D+E+L GG+ +A  VEGA+LDGVA++   +  H
Sbjct: 247 AVAEDAEVLGGGDGEAVLVEGAELDGVAVEWGFEGGH 283

[Close]
BLAST of Bhi02G001672 vs. TrEMBL
Match: tr|A0A1J6I8Z6|A0A1J6I8Z6_NICAT (Peroxisome biogenesis protein 7 OS=Nicotiana attenuata OX=49451 GN=PEX7_0 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.8e-06
Identity = 35/86 (40.70%), Postives = 51/86 (59.30%), Query Frame = 0 

Query: 10 NLASMFVEGTNGIRCGGKSEVVKLDRAIGDGGDEKGVVRFGPRDVVDSIGSVEGDVLRCG 69
          +L  MF+EGTN I  G + +VVK  R I   GD +G+V F P +VV  +  V     R G
Sbjct: 3  HLTCMFLEGTNRIVGGRQRKVVKFYRTIAVCGDYEGIVSFRPANVVIVVSGVVSGDFRYG 62

Query: 70 TGGIEIEDVKSTIAKDSEMLSGGNDD 96
          +   E+++V S + KD+E+L GG+ D
Sbjct: 63 SVWSELKNVNSAVTKDAEILCGGDGD 88

[Close]
BLAST of Bhi02G001672 vs. NCBI nr
Match: PON77003.1 (hypothetical protein PanWU01x14_030120 [Parasponia andersonii])

HSP 1 Score: 78.2 bits (191), Expect = 2.1e-11
Identity = 44/97 (45.36%), Postives = 66/97 (68.04%), Query Frame = 0 

Query: 26  GKSEVVKLDRAIGDGGDEKGVVRFGPRDVVDSIGS-VEGDVLRCG----TGGIEIEDVKS 85
           G+ EVV+LD AIG GG+++ VV  GP DV+ ++G  V G++   G     GG E EDV++
Sbjct: 187 GQGEVVELDGAIGYGGNDEVVVGLGPGDVIHAVGGVVRGELGDRGWGGPRGGGEFEDVEA 246

Query: 86  TIAKDSEMLSGGNDDAGFVEGAKLDGVAIKGSLKDEH 118
            +A+D+E+L GG+ +A  VEGA+LDGVA++   +  H
Sbjct: 247 AVAEDAEVLGGGDGEAVLVEGAELDGVAVEWGFEGGH 283

[Close]
BLAST of Bhi02G001672 vs. NCBI nr
Match: PON87316.1 (hypothetical protein TorRG33x02_169520, partial [Trema orientalis])

HSP 1 Score: 78.2 bits (191), Expect = 2.1e-11
Identity = 44/97 (45.36%), Postives = 63/97 (64.95%), Query Frame = 0 

Query: 26  GKSEVVKLDRAIGDGGDEKGVVRFGPRDVVDSIGSVEGDVLRCG-----TGGIEIEDVKS 85
           G+ EVV+LD AIG GG+++ VV  GP D+V ++G V    L  G       G E EDV++
Sbjct: 187 GQGEVVELDGAIGYGGNDEVVVGLGPGDIVHAVGGVVRGELGDGCWGGARRGGEFEDVEA 246

Query: 86  TIAKDSEMLSGGNDDAGFVEGAKLDGVAIKGSLKDEH 118
            +A D+E+L GG+ +A  VEGA+LDGVA++   +D H
Sbjct: 247 AVADDAEVLGGGDGEAVLVEGAELDGVAVEWGFEDGH 283

[Close]
BLAST of Bhi02G001672 vs. NCBI nr
Match: OIT01446.1 (peroxisome biogenesis protein 7 [Nicotiana attenuata])

HSP 1 Score: 61.2 bits (147), Expect = 2.7e-06
Identity = 35/86 (40.70%), Postives = 51/86 (59.30%), Query Frame = 0 

Query: 10 NLASMFVEGTNGIRCGGKSEVVKLDRAIGDGGDEKGVVRFGPRDVVDSIGSVEGDVLRCG 69
          +L  MF+EGTN I  G + +VVK  R I   GD +G+V F P +VV  +  V     R G
Sbjct: 3  HLTCMFLEGTNRIVGGRQRKVVKFYRTIAVCGDYEGIVSFRPANVVIVVSGVVSGDFRYG 62

Query: 70 TGGIEIEDVKSTIAKDSEMLSGGNDD 96
          +   E+++V S + KD+E+L GG+ D
Sbjct: 63 SVWSELKNVNSAVTKDAEILCGGDGD 88

The following BLAST results are available for this feature:
BLAST of Bhi02G001672 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi02G001672 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi02G001672 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A2P5EP52|A0A2P5EP52_9ROSA1.4e-1145.36Uncharacterized protein (Fragment) OS=Trema orientalis OX=63057 GN=TorRG33x02_16... [more]
tr|A0A2P5DUM7|A0A2P5DUM7_PARAD1.4e-1145.36Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_030120 PE... [more]
tr|A0A1J6I8Z6|A0A1J6I8Z6_NICAT1.8e-0640.70Peroxisome biogenesis protein 7 OS=Nicotiana attenuata OX=49451 GN=PEX7_0 PE=4 S... [more]
BLAST of Bhi02G001672 vs. NCBI nr
Match NameE-valueIdentityDescription
PON77003.12.1e-1145.36hypothetical protein PanWU01x14_030120 [Parasponia andersonii][more]
PON87316.12.1e-1145.36hypothetical protein TorRG33x02_169520, partial [Trema orientalis][more]
OIT01446.12.7e-0640.70peroxisome biogenesis protein 7 [Nicotiana attenuata][more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi02M001672Bhi02M001672mRNA