Bhi02G001646 (gene) Wax gourd

Overview
NameBhi02G001646
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionRetrotransposon protein, putative, Ty1-copia subclass
Locationchr2 : 53614613 .. 53618131 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GACGGGGTCAATGGGCGATCAGCGAGGCCTATGGCCTAGGCTGGTGACCTCCATTGCACTTACCGGAGGGGTGCCCGCCTAAGGTCTGCCCAAAGTGGCAGAGCCTACGTCATAATTTGTGGTAGTGGGGGCCTGCGTTCGCGCGGCCCCTTCCCAATTCCTTAGTTTGTAAATGTCTTCCTCTTGTTTCCAGGTATTTACTCTTCCTTTACTGTAAGTCTAGGAATTTCATCTTTACATTTTAAAACTATAGCGCTTCCGTAGCTTTGAAATTGTGGAGATGGGTTATTCACTTCCAATTTAGCGATGTTTGATAGTTAGTTGACTCGACCCTTCGAAAAATCTAAATGCTGCCGTACTTTTTGTTCACCATCTGTTTGAAGATTGAAGCTTACTTTTTGTTCATCTGTTTGAGATTTAAGCTTACCTTTTGTTCATCTGGTTTAGATTAAGACTCAATGCTTTCCAATGTGGGGGGGTTTTGTTAGTTTTGACTGGAGAGGAACGTCACTTTTGAACTTATCCAACAAAATAACAAAAAATTGGAATTGGAAATTTAGATGAAGAGTGAAGAGATTTTTGTTATTTTGTGATGGGTGAGACCCAACACGATAATGCATTCAGGCGGTGGTGACGTAAGTTCAGTTTTCATTTGTTTTCTGGGATCGTCATTCTGCATTGATGTCATGTTTTTTGAATGTGCTTTTCAGATTTCTGGTAATTTGAAGGATATCTGTATATTGTATTGTATTTTCAGATTGTGATGGATGACAGAAGAAATTCTCCATAATGAACCCTCAAATGGAAAGCAAGTTCTTATATCTTCAATAATGTTATGTCTCAAGTTCATGTTTATTTCCTGTCTGACCTTATGAGGTGCTTACCCATGTTTACTTCCAGCCTTCCGTTTAAAGATGGTTTTTCTCTAGCCTTTCATTTTGTCTGATGTATTTTCTTGTTCGTTGGACTAGAGTGCCTTTATTGGATGTTTTGAGAGTGGTGTTTGTGAAAGAAATCATGTACTACTCTGTTGAAATCTTTTAAAAGCAAAAATCAAAAGCATTTCCAAACTCATATTTTACTTTTCATGAGATATGCGGGAGGATATCAACATGTGCCTCTTGGTATATTATGATTGTTAAATTGCCTACCACAAGATTTCTGCAACAAACCTTCAAATGATCCATTGGTGTATGTATTAGTAGTTATTAGTTAGTATAACCTTCTTAAGGTCGGATTCAGTCCCGAAGGAATTTGCATTTGGGGAGGGGCTAGCTTTAGGATAAAGAATTCAGAGAAAGATTTGCAGTAAAAATCCTTGAGAATTGAGTAGTTCTTGCATATTTATTGGAAAACTGGAAATGGAAATAGCTTAGTTGTTTGGTTGAGAATAAGATGGGTGAAAATTTAACTTTCAAAATTAGAGGGAACCAACTTTTTTTATCGGAGAATCTCACATTGGAAAATTTGGTGTTGGAAGTCTCCTTTATGTACTTCAACTTTGTGTTTTGGGTTTGGGCTTCAACGGGTACCCATGTTTTGGATGAAGTGGGGAGATAGACCAATGTAGTTCGGTGGACGTCCCACATGCCGCCGTCATCATCCCGTTCCGTTTCGTCCGCCCATCCGTTCTGTTTTGCAGGTTTTGCTCTTCGCTTGACCGCTGTGCCTTGATGGTTTACTATTCATCGTTTTGAGGGCCCTGCCATTTCTAACAATTTTAAGACGTTGCCACATCATCAATGGCCCTCAGTAGCAACAATGACATTATGATATCTGACCTCAACTGTCCATTCTGGTTCGAAGGAGCGGACTTCAAGCGGTGGAAGCAAAAGATGATGCCGTTTTTCTTCACTGTCAAGAAAGTTGGCGAAGCTTGTACCAGTGCTAAGCCGATCGTTCCTTTAGAAGAACCAACTGAACAACAGATAAAAGAAGCTGCTGACTGGGAGGAGGAAGACTTTCTATATAAGAATTTAATTTTAAATGGTTTGATTGATGATCTGTTTGACTGCTACATTACAATGAAGATAGCGAAGGAGGTCTGGGATGCCCTGCAAAAGAAGTATTGACACCGAGGAGGCCAGGTCAAAGAAATATGCAGTTAGCCATTATCTCAAGTTTCAGATGACGGATGACAAATCCGTGGAGGCCCAATCCCATGAACTCTAGAAGATACAAACAATTCCAAATTGCTGTTATTATTGATAAACTGCCCCCTTTATGGAAGGACTCTAAGAACACTTTGAGGCATAAGACCAAGTTCTCCTTGGAGAGTCTTATTACTCGGCTAAGGATCGAGGAAGAAGCCTAGAAGCAGGACCAAAGGGAGGAGGTGAACGCAGTACCTGGGAAACCCACTTCTGCCGTGGTAAAACATGACAAAAAATCTAAGAGGACAAAAAGGAAAGGTCAGAACTGTGGCTCCAGCAACCAGAACCAACAGAAAAAACAAAAGCTTGCTTTAATTGTAATAAATTTGGGCACATGACTAGGAATTGTAGGAATAGGCGTCGTTCTGCTGGTCAGGTGAACCTGACAGAAGAACCGTTAGTCGCCATGATCACAAAAGTAAATGTGATCGGTGGATGTGAAGGGTGGTGGATAGACACTGGTGCGACGTGCCATGTCTGTCATGACCTTAGTCTATTTAAATCTTATATTGAAACTAAGGATAAGAATATTTTGTTGGGAGATCACCGCTCCACGAAAGTTGCTAGAACCGGTGAGGTGGAACTGAAGTTTACCTCTGGGAAGACCCTCACGTTGAAGGACGTTCTGCACACTCCGGAGATACGAAAGAATTTGGTTTCGGGCTATCTCCTCAACAAATTCGGGTTTACTCAAACTATAGGGGCATGCCTATATACCCTTACAAAAAATAATGTATTTGTAGGGAAAGGGTATGCAACTGAGGGAATGTTCAAATTAAATTTAGACTTTAATAAAATGAAATCTTCTGTGTATATGTTGTGTTCTATGAATATTTGGCATGCTAAACTCTGTCATGTGAATAAGAACTTAATTAGTAACATGATCAGGTGGAAATGATACCTAAGTTATCCACGAATGATTTTGATAAATGCGAGTATTGTAGTCAGGCTAAAATTACTAAAACTCTGCATAAATCTGTACTTAGGAATTCTGAGCCTCTAGATTTGATTCATTCTGATGTTTGTGAATTTGATGGCATATTGACTAGGAACAGTAAAAGATATTTCATTACTTTTATTGACGACTGCTCTGATTTTACTTTTGTATACTTGCTGAAAAAGAAAAGTGATGCTTTTGATGCCTTCATAGTGATAGGGGAACCGAATACGACTCGGACAGTTTTAATGAATTCTTTAACTCACATGGAATAATATACGAAAAGACCGCACCTTATTCTCCTGAAATGAACGGAAAAGTCGAAAGGAAAAACAGAACTTATCTGAGCTAGTAGTTGCTATTTTATTTAGTTCAGGAGTCGCGTCTTATTGGTGGGGTGAAATCATCCTTACCATGTGTAATGTCCTA

mRNA sequence

GACGGGGTCAATGGGCGATCAGCGAGGCCTATGGCCTAGGCTGGTGACCTCCATTGCACTTACCGGAGGGGTGCCCGCCTAAGGTCTGCCCAAAGTGGCAGAGCCTACGTCATAATTTGTGGTAGTGGGGGCCTGCGTTCGCGCGGCCCCTTCCCAATTCCTTAGTTTGTAAATGTCTTCCTCTTGTTTCCAGATTGTGATGGATGACAGAAGAAATTCTCCATAATGAACCCTCAAATGGAAAGCAAGTTCTTATATCTTCAATAATGTTATGTCTCAAGTTCATGTTTATTTCCTGTCTGACCTTATGAGGTGCTTACCCATGTTTACTTCCAGCCTTCCGTTTAAAGATGGTTTTTCTCTAGCCTTTCATTTTGTCTGATGTATTTTCTTGTTCGTTGGACTAGAGTGCCTTTATTGGATGTTTTGAGAGTGGTGTTTGTGAAAGAAATCATGTACTACTCTGTTGAAATCTTTTAAAAGCAAAAATCAAAAGCATTTCCAAACTCATATTTTACTTTTCATGAGATATGCGGGAGGATATCAACATGTGCCTCTTGGTATATTATGATTGTTAAATTGCCTACCACAAGATTTCTGCAACAAACCTTCAAATGATCCATTGGTGTATGTATTAGTAGTTATTAGTTAGTATAACCTTCTTAAGGTCGGATTCAGTCCCGAAGGAATTTGCATTTGGGGAGGGGCTAGCTTTAGGATAAAGAATTCAGAGAAAGATTTGCAGTAAAAATCCTTGAGAATTGAGTAGTTCTTGCATATTTATTGGAAAACTGGAAATGGAAATAGCTTAGTTGTTTGGTTGAGAATAAGATGGGTGAAAATTTAACTTTCAAAATTAGAGGGAACCAACTTTTTTTATCGGAGAATCTCACATTGGAAAATTTGGTGTTGGAAGTCTCCTTTATGTACTTCAACTTTGTGTTTTGGGTTTGGGCTTCAACGGGTACCCATGTTTTGGATGAAGTGGGGAGATAGACCAATGTAGTTCGGTGGACGTCCCACATGCCGCCGTCATCATCCCGTTCCGTTTCGTCCGCCCATCCGTTCTGTTTTGCAGGTTTTGCTCTTCGCTTGACCGCTGTGCCTTGATGGTTTACTATTCATCGTTTTGAGGGCCCTGCCATTTCTAACAATTTTAAGACGTTGCCACATCATCAATGGCCCTCAGTAGCAACAATGACATTATGATATCTGACCTCAACTGTCCATTCTGGTTCGAAGGAGCGGACTTCAAGCGGTGGAAGCAAAAGATGATGCCGTTTTTCTTCACTGTCAAGAAAGTTGGCGAAGCTTGTACCAGTGCTAAGCCGATCGTTCCTTTAGAAGAACCAACTGAACAACAGATAAAAGAAGCTGCTGACTGGGAGGAGGAAGACTTTCTATATAAGAATTTAATTTTAAATGGTTTGATTGATGATCTGTTTGACTGCTACATTACAATGAAGATAGCGAAGGAGGTCTGGGATGCCCTGCAAAAGAAGTATTGACACCGAGGAGGCCAGGTCAAAGAAATATGCAGTTAGCCATTATCTCAAGTTTCAGATGACGGATGACAAATCCGTGGAGGCCCAATCCCATGAACTCTAGAAGATACAAACAATTCCAAATTGCTGTTATTATTGATAAACTGCCCCCTTTATGGAAGGACTCTAAGAACACTTTGAGGCATAAGACCAAGTTCTCCTTGGAGAGTCTTATTACTCGGCTAAGGATCGAGGAAGAAGCCTAGAAGCAGGACCAAAGGGAGGAGGTGAACGCAGTACCTGGGAAACCCACTTCTGCCGTGGTAAAACATGACAAAAAATCTAAGAGGACAAAAAGGAAAGGTCAGAACTGTGGCTCCAGCAACCAGAACCAACAGAAAAAACAAAAGCTTGCTTTAATTGTAATAAATTTGGGCACATGACTAGGAATTGTAGGAATAGGCGTCGTTCTGCTGGTCAGGTGAACCTGACAGAAGAACCGTTAGTCGCCATGATCACAAAAGTAAATGTGATCGGTGGATGTGAAGGGTGGTGGATAGACACTGGTGCGACGTGCCATGTCTGTCATGACCTTAGTCTATTTAAATCTTATATTGAAACTAAGGATAAGAATATTTTGTTGGGAGATCACCGCTCCACGAAAGTTGCTAGAACCGGTGAGGTGGAACTGAAGTTTACCTCTGGGAAGACCCTCACGTTGAAGGACGTTCTGCACACTCCGGAGATACGAAAGAATTTGGTTTCGGGCTATCTCCTCAACAAATTCGGGTTTACTCAAACTATAGGGGCATGCCTATATACCCTTACAAAAAATAATGTATTTGTAGGGAAAGGGTATGCAACTGAGGGAATGTTCAAATTAAATTTAGACTTTAATAAAATGAAATCTTCTGTGTATATGTTGTGTTCTATGAATATTTGGCATGCTAAACTCTGTCATGTGAATAAGAACTTAATTAGTAACATGATCAGGTGGAAATGATACCTAAGTTATCCACGAATGATTTTGATAAATGCGAGTATTGTAGTCAGGCTAAAATTACTAAAACTCTGCATAAATCTGTACTTAGGAATTCTGAGCCTCTAGATTTGATTCATTCTGATGTTTGTGAATTTGATGGCATATTGACTAGGAACAGTAAAAGATATTTCATTACTTTTATTGACGACTGCTCTGATTTTACTTTTGTATACTTGCTGAAAAAGAAAAGTGATGCTTTTGATGCCTTCATAGTGATAGGGGAACCGAATACGACTCGGACAGTTTTAATGAATTCTTTAACTCACATGGAATAATATACGAAAAGACCGCACCTTATTCTCCTGAAATGAACGGAAAAGTCGAAAGGAAAAACAGAACTTATCTGAGCTAGTAGTTGCTATTTTATTTAGTTCAGGAGTCGCGTCTTATTGGTGGGGTGAAATCATCCTTACCATGTGTAATGTCCTA

Coding sequence (CDS)

ATGACTAGGAATTGTAGGAATAGGCGTCGTTCTGCTGGTCAGGTGAACCTGACAGAAGAACCGTTAGTCGCCATGATCACAAAAGTAAATGTGATCGGTGGATGTGAAGGGTGGTGGATAGACACTGGTGCGACGTGCCATGTCTGTCATGACCTTAGTCTATTTAAATCTTATATTGAAACTAAGGATAAGAATATTTTGTTGGGAGATCACCGCTCCACGAAAGTTGCTAGAACCGGTGAGGTGGAACTGAAGTTTACCTCTGGGAAGACCCTCACGTTGAAGGACGTTCTGCACACTCCGGAGATACGAAAGAATTTGGTTTCGGGCTATCTCCTCAACAAATTCGGGTTTACTCAAACTATAGGGGCATGCCTATATACCCTTACAAAAAATAATGTATTTGTAGGGAAAGGGTATGCAACTGAGGGAATGTTCAAATTAAATTTAGACTTTAATAAAATGAAATCTTCTGTGTATATGTTGTGTTCTATGAATATTTGGCATGCTAAACTCTGTCATGTGAATAAGAACTTAATTAGTAACATGATCAGGTGGAAATGA

Protein sequence

MTRNCRNRRRSAGQVNLTEEPLVAMITKVNVIGGCEGWWIDTGATCHVCHDLSLFKSYIETKDKNILLGDHRSTKVARTGEVELKFTSGKTLTLKDVLHTPEIRKNLVSGYLLNKFGFTQTIGACLYTLTKNNVFVGKGYATEGMFKLNLDFNKMKSSVYMLCSMNIWHAKLCHVNKNLISNMIRWK
Homology
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BLAST of Bhi02G001646 vs. Swiss-Prot
Match: sp|P10978|POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.9e-13
Identity = 40/141 (28.37%), Postives = 77/141 (54.61%), Query Frame = 0 

Query: 38  WWIDTGATCHVCHDLSLFKSYIETKDKNILLGDHRSTKVARTGEVELKFTSGKTLTLKDV 97
           W +DT A+ H      LF  Y+      + +G+   +K+A  G++ +K   G TL LKDV
Sbjct: 294 WVVDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDV 353

Query: 98  LHTPEIRKNLVSGYLLNKFGFTQTIGACLYTLTKNNVFVGKGYATEGMFKLNLDFNKMK- 157
            H P++R NL+SG  L++ G+        + LTK ++ + KG A   +++ N +  + + 
Sbjct: 354 RHVPDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGTLYRTNAEICQGEL 413

Query: 158 SSVYMLCSMNIWHAKLCHVNK 178
           ++     S+++WH ++ H+++
Sbjct: 414 NAAQDEISVDLWHKRMGHMSE 434

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BLAST of Bhi02G001646 vs. Swiss-Prot
Match: sp|P25601|YCH5_YEAST (Putative transposon Ty5-1 protein YCL075W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5B PE=5 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.2e-06
Identity = 30/100 (30.00%), Postives = 51/100 (51.00%), Query Frame = 0 

Query: 10  RSAGQVNLTEEPLVAMITKVNVIGGCEGWWIDTGATCHVCHDLSLFKSYIETKDKNILLG 69
           ++AGQ+  T +  + M++          W  DTG T H+CHD S+F S+  +  K+ + G
Sbjct: 53  QTAGQI--TPKSWLCMLSSTVPATKSSEWIFDTGCTSHMCHDRSIFSSFTRSSRKDFVRG 112

Query: 70  DHRSTKVARTGEVELKFTSGKTLTLKDVLHTPEIRKNLVS 110
              S  +  +G V +      T+ L DV + P++  NL+S
Sbjct: 113 VGGSIPIMGSGTVNI-----GTVQLHDVSYVPDLPVNLIS 145

[Close]
BLAST of Bhi02G001646 vs. Swiss-Prot
Match: sp|Q94HW2|POLR1_ARATH (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.9e-05
Identity = 40/156 (25.64%), Postives = 78/156 (50.00%), Query Frame = 0 

Query: 38  WWIDTGATCHVCHD---LSLFKSYIETKDKNILLGDHRSTKVARTGEVELKFTSGKTLTL 97
           W +D+GAT H+  D   LSL + Y  T   ++++ D  +  ++ TG   L  T  + L L
Sbjct: 331 WLLDSGATHHITSDFNNLSLHQPY--TGGDDVMVADGSTIPISHTGSTSLS-TKSRPLNL 390

Query: 98  KDVLHTPEIRKNLVSGY-LLNKFGFTQTIGACLYTLTKNNVFVG--KGYATEGMFKLNLD 157
            ++L+ P I KNL+S Y L N  G +       + +   N  V   +G   + +++  + 
Sbjct: 391 HNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIA 450

Query: 158 FNK---MKSSVYMLCSMNIWHAKLCHVNKNLISNMI 185
            ++   + +S     + + WHA+L H   ++++++I
Sbjct: 451 SSQPVSLFASPSSKATHSSWHARLGHPAPSILNSVI 483

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BLAST of Bhi02G001646 vs. Swiss-Prot
Match: sp|Q9ZT94|POLR2_ARATH (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.4e-05
Identity = 42/165 (25.45%), Postives = 76/165 (46.06%), Query Frame = 0 

Query: 29  VNVIGGCEGWWIDTGATCHVCHD---LSLFKSYIETKDKNILLGDHRSTKVARTGEVELK 88
           VN       W +D+GAT H+  D   LS  + Y  T   ++++ D  +  +  TG   L 
Sbjct: 301 VNSPYNANNWLLDSGATHHITSDFNNLSFHQPY--TGGDDVMIADGSTIPITHTGSASLP 360

Query: 89  FTSGKTLTLKDVLHTPEIRKNLVSGYLL---NKFGFTQTIGACLYTLTKNNVFVGKGYAT 148
            TS ++L L  VL+ P I KNL+S Y L   N+        +         V + +G   
Sbjct: 361 -TSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTK 420

Query: 149 EGMFKLNLDFNKMKSSVYMLCSM---NIWHAKLCHVNKNLISNMI 185
           + +++  +  ++  S     CS    + WH++L H +  +++++I
Sbjct: 421 DELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVI 462

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BLAST of Bhi02G001646 vs. TrEMBL
Match: tr|A0A2P5FP19|A0A2P5FP19_9ROSA (Zinc finger, CCHC-type (Fragment) OS=Trema orientalis OX=63057 GN=TorRG33x02_046500 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.8e-62
Identity = 117/158 (74.05%), Postives = 138/158 (87.34%), Query Frame = 0 

Query: 1   MTRNCRNRRRSAGQVNLTEEPLVAMITKVNVIGGCEGWWIDTGATCHVCHDLSLFKSYIE 60
           M RNCRNRRR A Q NLTEE L+AMI+++N++GG EGWW+DTGA+ HVC++ +LFK+Y E
Sbjct: 278 MARNCRNRRRPAPQANLTEEQLIAMISEINIVGGSEGWWVDTGASRHVCNNRALFKTYSE 337

Query: 61  TKDKNILLGDHRSTKVARTGEVELKFTSGKTLTLKDVLHTPEIRKNLVSGYLLNKFGFTQ 120
           T+DK +LLGD  +T VA TGEVELKFTSGKTL LKDVLHTPE+RKNLVSGYLLNK GFTQ
Sbjct: 338 TEDKKVLLGDSHTTIVAGTGEVELKFTSGKTLILKDVLHTPEMRKNLVSGYLLNKGGFTQ 397

Query: 121 TIGACLYTLTKNNVFVGKGYATEGMFKLNLDFNKMKSS 159
           TIGA L+T+TKNNVFVGKGYAT+GMFKLN+D NK+  S
Sbjct: 398 TIGADLFTITKNNVFVGKGYATDGMFKLNVDANKIAPS 435

[Close]
BLAST of Bhi02G001646 vs. TrEMBL
Match: tr|Q0KIN7|Q0KIN7_SOLDE (Polyprotein, putative OS=Solanum demissum OX=50514 GN=SDM1_27t00018 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.0e-49
Identity = 98/185 (52.97%), Postives = 129/185 (69.73%), Query Frame = 0 

Query: 1   MTRNCRNRRRSAG-QVNLTEEPLVAMITKVNVIGGCEGWWIDTGATCHVCHDLSLFKSYI 60
           + R CR R+R    Q N+TEEP VA+IT +N++   +GWW D+GA  HVC+D   FK Y 
Sbjct: 272 IARFCRFRKRGPNPQANVTEEPFVAVITDINMVENVDGWWADSGANRHVCYDKDWFKKYT 331

Query: 61  ETKD-KNILLGDHRSTKVARTGEVELKFTSGKTLTLKDVLHTPEIRKNLVSGYLLNKFGF 120
             ++ K I+LGD  +T+V  TG+VEL FTSG+ LTLKDVL+TP +RK L+S +LLNK GF
Sbjct: 332 HFEEPKTIMLGDSHTTQVLGTGDVELCFTSGRVLTLKDVLYTPSMRKKLMSSFLLNKAGF 391

Query: 121 TQTIGACLYTLTKNNVFVGKGYATEGMFKLNLDFNKMKSSVYMLCSMNIWHAKLCHVNKN 180
            Q I +  Y + K  +FVGKGYA +GMFKLN++ NK  +SVYML S N WHA+LCH+N  
Sbjct: 392 KQIIESNQYVIVKKGIFVGKGYACDGMFKLNVEMNKTSTSVYMLSSTNFWHARLCHINDR 451

Query: 181 LISNM 184
            +  M
Sbjct: 452 YVGIM 456

[Close]
BLAST of Bhi02G001646 vs. TrEMBL
Match: tr|A0A2N9JB76|A0A2N9JB76_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS61787 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.4e-42
Identity = 95/172 (55.23%), Postives = 120/172 (69.77%), Query Frame = 0 

Query: 1   MTRNCRNRRR-SAGQVNLTEEPLVAMITKVNVIGGCEGWWIDTGATCHVCHDLSLFKSYI 60
           + R C+ R+R S  Q N+TEEPLVAMIT VN++   EGWW D+GA  HVC+D + FK Y 
Sbjct: 230 IARICKFRKRESVPQANVTEEPLVAMITDVNMVQFVEGWWADSGANRHVCYDKNWFKKYT 289

Query: 61  E-TKDKNILLGDHRSTKVARTGEVELKFTSGKTLTLKDVLHTPEIRKNLVSGYLLNKFGF 120
              ++K I+LGD   TKV  +GEVEL FTSG+ LTLKDVLHTP +RKNL+S YLLNK GF
Sbjct: 290 PFEEEKTIMLGDSSKTKVLGSGEVELNFTSGRVLTLKDVLHTPSMRKNLMSSYLLNKAGF 349

Query: 121 TQTIGACLYTLTKNNVFVGKGYATEGMFKLNLDFNKMKSSVYMLCSMNIWHA 171
            QT+ +  Y +TK  +FVGKGYA +GMFKLN++   + S      S + WHA
Sbjct: 350 KQTMESDQYVITKKGLFVGKGYACDGMFKLNVEIGVL-SRFTSKPSRDHWHA 400

[Close]
BLAST of Bhi02G001646 vs. TrEMBL
Match: tr|A0A1U8GEY5|A0A1U8GEY5_CAPAN (uncharacterized protein LOC107865557 OS=Capsicum annuum OX=4072 GN=LOC107865557 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 5.4e-42
Identity = 83/171 (48.54%), Postives = 119/171 (69.59%), Query Frame = 0 

Query: 14  QVNLTEEPLVAMITKVNVIGGCEGWWIDTGATCHVCHDLSLFKSYIETKD-KNILLGDHR 73
           Q N+TEE  VA+IT ++++   +GWW D+ A  HVC+D   FK Y   ++ K I+ GD  
Sbjct: 23  QANVTEESFVAVITDIDMVVNVDGWWADSSANRHVCYDKDWFKKYKNFEEPKTIIPGDSH 82

Query: 74  STKVARTGEVELKFTSGKTLTLKDVLHTPEIRKNLVSGYLLNKFGFTQTIGACLYTLTKN 133
           +++V    +VEL+FTSG+ L LKDVL TP ++KNL+S +LLNK GF Q I +  Y + KN
Sbjct: 83  TSQVLGVRDVELRFTSGRVLILKDVLCTPSMKKNLMSSFLLNKAGFRQIIESDEYIIVKN 142

Query: 134 NVFVGKGYATEGMFKLNLDFNKMKSSVYMLCSMNIWHAKLCHVNKNLISNM 184
           N+FVGKGY  + MFKL+++ NK  +SVYML S+N WH++LCH+N+  +  M
Sbjct: 143 NIFVGKGYTCDSMFKLSVEMNKSSTSVYMLSSINFWHSRLCHINERYVGIM 193

[Close]
BLAST of Bhi02G001646 vs. TrEMBL
Match: tr|A0A2N9HRP0|A0A2N9HRP0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS42312 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.6e-41
Identity = 92/164 (56.10%), Postives = 113/164 (68.90%), Query Frame = 0 

Query: 8   RRRSAGQVNLTEEPLVAMITKVNVIGGCEGWWIDTGATCHVCHDLSLFKSYIETKD-KNI 67
           +R S  Q N+TEEPLV MIT VN+I   EGWW D GA  HVC+D + FK Y   ++ K I
Sbjct: 194 KRESVPQANVTEEPLVVMITDVNMIQFVEGWWADFGANRHVCYDKNWFKKYTPFEEGKTI 253

Query: 68  LLGDHRSTKVARTGEVELKFTSGKTLTLKDVLHTPEIRKNLVSGYLLNKFGFTQTIGACL 127
           +LGD   TKV  +GEVEL FTSG+ LTLKDVLHTP +RKNL+S YLLNK GF QT+ +  
Sbjct: 254 MLGDSSKTKVLGSGEVELNFTSGRVLTLKDVLHTPSMRKNLMSSYLLNKAGFRQTMESDQ 313

Query: 128 YTLTKNNVFVGKGYATEGMFKLNLDFNKMKSSVYMLCSMNIWHA 171
           Y +TK  +FVGKGYA +GMFKLN++   + S      S + WHA
Sbjct: 314 YVITKKGLFVGKGYACDGMFKLNVEIGVL-SRFTSKPSRDHWHA 356

[Close]
BLAST of Bhi02G001646 vs. NCBI nr
Match: XP_021732277.1 (uncharacterized protein LOC110699091 [Chenopodium quinoa])

HSP 1 Score: 254.6 bits (649), Expect = 2.6e-64
Identity = 122/186 (65.59%), Postives = 147/186 (79.03%), Query Frame = 0 

Query: 1   MTRNCRNRRRSA-GQVNLTEEPLVAMITKVNVIGGCEGWWIDTGATCHVCHDLSLFKSYI 60
           M R CRN       Q ++ EEP VAMIT++N+ GG +GWWIDTGAT HVC+D  +FK+Y 
Sbjct: 462 MARKCRNMPNPVPAQASMIEEPFVAMITEINLTGGSDGWWIDTGATRHVCYDRRMFKTYT 521

Query: 61  E-TKDKNILLGDHRSTKVARTGEVELKFTSGKTLTLKDVLHTPEIRKNLVSGYLLNKFGF 120
           E T DK +LLGD  ST +A  G VELKFTSG+TL LKDVLHTPE+RKNLVSG+LLNK GF
Sbjct: 522 EKTDDKKVLLGDSHSTNIAGVGNVELKFTSGRTLILKDVLHTPEMRKNLVSGFLLNKAGF 581

Query: 121 TQTIGACLYTLTKNNVFVGKGYATEGMFKLNLDFNKMKSSVYMLCS-MNIWHAKLCHVNK 180
            QTIG+ L+TLTKN +FVGKGYAT+GMFKLN++ NK+ +S YMLCS +N+WH +LCHVNK
Sbjct: 582 IQTIGSDLFTLTKNGIFVGKGYATDGMFKLNVEVNKISNSAYMLCSTINVWHTRLCHVNK 641

Query: 181 NLISNM 184
            LI NM
Sbjct: 642 RLIKNM 647

[Close]
BLAST of Bhi02G001646 vs. NCBI nr
Match: PON99483.1 (Zinc finger, CCHC-type, partial [Trema orientalis])

HSP 1 Score: 247.3 bits (630), Expect = 4.2e-62
Identity = 117/158 (74.05%), Postives = 138/158 (87.34%), Query Frame = 0 

Query: 1   MTRNCRNRRRSAGQVNLTEEPLVAMITKVNVIGGCEGWWIDTGATCHVCHDLSLFKSYIE 60
           M RNCRNRRR A Q NLTEE L+AMI+++N++GG EGWW+DTGA+ HVC++ +LFK+Y E
Sbjct: 278 MARNCRNRRRPAPQANLTEEQLIAMISEINIVGGSEGWWVDTGASRHVCNNRALFKTYSE 337

Query: 61  TKDKNILLGDHRSTKVARTGEVELKFTSGKTLTLKDVLHTPEIRKNLVSGYLLNKFGFTQ 120
           T+DK +LLGD  +T VA TGEVELKFTSGKTL LKDVLHTPE+RKNLVSGYLLNK GFTQ
Sbjct: 338 TEDKKVLLGDSHTTIVAGTGEVELKFTSGKTLILKDVLHTPEMRKNLVSGYLLNKGGFTQ 397

Query: 121 TIGACLYTLTKNNVFVGKGYATEGMFKLNLDFNKMKSS 159
           TIGA L+T+TKNNVFVGKGYAT+GMFKLN+D NK+  S
Sbjct: 398 TIGADLFTITKNNVFVGKGYATDGMFKLNVDANKIAPS 435

[Close]
BLAST of Bhi02G001646 vs. NCBI nr
Match: ABI34306.1 (Polyprotein, putative [Solanum demissum])

HSP 1 Score: 204.5 bits (519), Expect = 3.1e-49
Identity = 98/185 (52.97%), Postives = 129/185 (69.73%), Query Frame = 0 

Query: 1   MTRNCRNRRRSAG-QVNLTEEPLVAMITKVNVIGGCEGWWIDTGATCHVCHDLSLFKSYI 60
           + R CR R+R    Q N+TEEP VA+IT +N++   +GWW D+GA  HVC+D   FK Y 
Sbjct: 272 IARFCRFRKRGPNPQANVTEEPFVAVITDINMVENVDGWWADSGANRHVCYDKDWFKKYT 331

Query: 61  ETKD-KNILLGDHRSTKVARTGEVELKFTSGKTLTLKDVLHTPEIRKNLVSGYLLNKFGF 120
             ++ K I+LGD  +T+V  TG+VEL FTSG+ LTLKDVL+TP +RK L+S +LLNK GF
Sbjct: 332 HFEEPKTIMLGDSHTTQVLGTGDVELCFTSGRVLTLKDVLYTPSMRKKLMSSFLLNKAGF 391

Query: 121 TQTIGACLYTLTKNNVFVGKGYATEGMFKLNLDFNKMKSSVYMLCSMNIWHAKLCHVNKN 180
            Q I +  Y + K  +FVGKGYA +GMFKLN++ NK  +SVYML S N WHA+LCH+N  
Sbjct: 392 KQIIESNQYVIVKKGIFVGKGYACDGMFKLNVEMNKTSTSVYMLSSTNFWHARLCHINDR 451

Query: 181 LISNM 184
            +  M
Sbjct: 452 YVGIM 456

[Close]
BLAST of Bhi02G001646 vs. NCBI nr
Match: XP_016567288.1 (PREDICTED: uncharacterized protein LOC107865557 [Capsicum annuum])

HSP 1 Score: 179.9 bits (455), Expect = 8.2e-42
Identity = 83/171 (48.54%), Postives = 119/171 (69.59%), Query Frame = 0 

Query: 14  QVNLTEEPLVAMITKVNVIGGCEGWWIDTGATCHVCHDLSLFKSYIETKD-KNILLGDHR 73
           Q N+TEE  VA+IT ++++   +GWW D+ A  HVC+D   FK Y   ++ K I+ GD  
Sbjct: 23  QANVTEESFVAVITDIDMVVNVDGWWADSSANRHVCYDKDWFKKYKNFEEPKTIIPGDSH 82

Query: 74  STKVARTGEVELKFTSGKTLTLKDVLHTPEIRKNLVSGYLLNKFGFTQTIGACLYTLTKN 133
           +++V    +VEL+FTSG+ L LKDVL TP ++KNL+S +LLNK GF Q I +  Y + KN
Sbjct: 83  TSQVLGVRDVELRFTSGRVLILKDVLCTPSMKKNLMSSFLLNKAGFRQIIESDEYIIVKN 142

Query: 134 NVFVGKGYATEGMFKLNLDFNKMKSSVYMLCSMNIWHAKLCHVNKNLISNM 184
           N+FVGKGY  + MFKL+++ NK  +SVYML S+N WH++LCH+N+  +  M
Sbjct: 143 NIFVGKGYTCDSMFKLSVEMNKSSTSVYMLSSINFWHSRLCHINERYVGIM 193

[Close]
BLAST of Bhi02G001646 vs. NCBI nr
Match: GAU47899.1 (hypothetical protein TSUD_25140 [Trifolium subterraneum])

HSP 1 Score: 175.6 bits (444), Expect = 1.5e-40
Identity = 78/149 (52.35%), Postives = 113/149 (75.84%), Query Frame = 0 

Query: 1   MTRNCRNRRRSAG------QVNLTEEPLVAMITKVNVIGGCEGWWIDTGATCHVCHDLSL 60
           M++ CRN +R          VN+ +EP   MIT++N++GG +GWWIDTGAT HVC+D ++
Sbjct: 288 MSKKCRNPKRPKPANLAHINVNVADEPYTCMITEINMVGGTDGWWIDTGATRHVCYDRAM 347

Query: 61  FKSYIETKDKNILLGDHRSTKVARTGEVELKFTSGKTLTLKDVLHTPEIRKNLVSGYLLN 120
           FK+Y   ++K + +G+  ++ V+  G+V LKFTSGKTL LK+VLH PE++K+LVS +LLN
Sbjct: 348 FKTYTNAENKKVQIGNAHTSDVSGIGDVVLKFTSGKTLILKEVLHVPEMKKHLVSSFLLN 407

Query: 121 KFGFTQTIGACLYTLTKNNVFVGKGYATE 144
           K GF QTIGA +YT+TKN++F+GKGYA++
Sbjct: 408 KVGFNQTIGADMYTITKNDIFIGKGYASD 436

The following BLAST results are available for this feature:
BLAST of Bhi02G001646 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P10978|POLX_TOBAC1.9e-1328.37Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
sp|P25601|YCH5_YEAST2.2e-0630.00Putative transposon Ty5-1 protein YCL075W OS=Saccharomyces cerevisiae (strain AT... [more]
sp|Q94HW2|POLR1_ARATH1.9e-0525.64Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
sp|Q9ZT94|POLR2_ARATH2.4e-0525.45Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
BLAST of Bhi02G001646 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi02G001646 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A2P5FP19|A0A2P5FP19_9ROSA2.8e-6274.05Zinc finger, CCHC-type (Fragment) OS=Trema orientalis OX=63057 GN=TorRG33x02_046... [more]
tr|Q0KIN7|Q0KIN7_SOLDE2.0e-4952.97Polyprotein, putative OS=Solanum demissum OX=50514 GN=SDM1_27t00018 PE=4 SV=1[more]
tr|A0A2N9JB76|A0A2N9JB76_FAGSY1.4e-4255.23Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS61787 PE=4 SV=1[more]
tr|A0A1U8GEY5|A0A1U8GEY5_CAPAN5.4e-4248.54uncharacterized protein LOC107865557 OS=Capsicum annuum OX=4072 GN=LOC107865557 ... [more]
tr|A0A2N9HRP0|A0A2N9HRP0_FAGSY1.6e-4156.10Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS42312 PE=4 SV=1[more]
BLAST of Bhi02G001646 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_021732277.12.6e-6465.59uncharacterized protein LOC110699091 [Chenopodium quinoa][more]
PON99483.14.2e-6274.05Zinc finger, CCHC-type, partial [Trema orientalis][more]
ABI34306.13.1e-4952.97Polyprotein, putative [Solanum demissum][more]
XP_016567288.18.2e-4248.54PREDICTED: uncharacterized protein LOC107865557 [Capsicum annuum][more]
GAU47899.11.5e-4052.35hypothetical protein TSUD_25140 [Trifolium subterraneum][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi02M001646Bhi02M001646mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi02G001646Cucumber (Gy14) v1cgywgoB589
Bhi02G001646Cucumber (Gy14) v2cgybwgoB091
Bhi02G001646Cucurbita maxima (Rimu)cmawgoB0083
Bhi02G001646Cucurbita maxima (Rimu)cmawgoB0236
Bhi02G001646Cucurbita moschata (Rifu)cmowgoB0087
Bhi02G001646Cucurbita moschata (Rifu)cmowgoB0229
Bhi02G001646Cucurbita pepo (Zucchini)cpewgoB0472
Bhi02G001646Cucurbita pepo (Zucchini)cpewgoB1072
Bhi02G001646Wild cucumber (PI 183967)cpiwgoB097
Bhi02G001646Cucumber (Chinese Long) v3cucwgoB102
Bhi02G001646Cucumber (Chinese Long) v2cuwgoB094
Bhi02G001646Bottle gourd (USVL1VR-Ls)lsiwgoB517
Bhi02G001646Melon (DHL92) v3.6.1medwgoB303
Bhi02G001646Melon (DHL92) v3.5.1mewgoB304
Bhi02G001646Watermelon (Charleston Gray)wcgwgoB362
Bhi02G001646Watermelon (97103) v2wgowmbB630
Bhi02G001646Watermelon (97103) v1wgowmB653