Bhi02G001400 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi02G001400
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Alpha/beta-Hydrolases superfamily protein
Location	chr2 : 45527785 .. 45527994 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGTCACCGCCTTTATTGACCTTGGCGCTGATCTCTGATGTTGGCACTGTGGAGGAATGGAGAATAGTGGCTAGAGAACTTCTACAAAAGGACAGTAAAGCCAATGGGCGTGCTACTATCGTTGATCGGCCTGGTCTGGGTTTCTCTGATAGGCCAAAAATGGATTACAACACTGAACGTGATGAAGTTCTTGATCAATGCTTCTGA

mRNA sequence

ATGTTGTCACCGCCTTTATTGACCTTGGCGCTGATCTCTGATGTTGGCACTGTGGAGGAATGGAGAATAGTGGCTAGAGAACTTCTACAAAAGGACAGTAAAGCCAATGGGCGTGCTACTATCGTTGATCGGCCTGGTCTGGGTTTCTCTGATAGGCCAAAAATGGATTACAACACTGAACGTGATGAAGTTCTTGATCAATGCTTCTGA

Coding sequence (CDS)

ATGTTGTCACCGCCTTTATTGACCTTGGCGCTGATCTCTGATGTTGGCACTGTGGAGGAATGGAGAATAGTGGCTAGAGAACTTCTACAAAAGGACAGTAAAGCCAATGGGCGTGCTACTATCGTTGATCGGCCTGGTCTGGGTTTCTCTGATAGGCCAAAAATGGATTACAACACTGAACGTGATGAAGTTCTTGATCAATGCTTCTGA

Protein sequence

MLSPPLLTLALISDVGTVEEWRIVARELLQKDSKANGRATIVDRPGLGFSDRPKMDYNTERDEVLDQCF

Homology

[Close]

BLAST of Bhi02G001400 vs. TAIR10
Match: AT1G74640.1 (alpha/beta-Hydrolases superfamily protein)

HSP 1 Score: 75.1 bits (183), Expect = 1.9e-14
Identity = 34/55 (61.82%), Postives = 44/55 (80.00%), Query Frame = 0


Query: 6   LLTLALISDVGTVEEWRIVARELLQKDSKANGRATIVDRPGLGFSDRPKMDYNTE 61
           +L +  ISDV TVEEWR VA++++Q+D   N RATIVD PGLG+S RPKMDY+T+
Sbjct: 87  ILMIPTISDVSTVEEWRSVAKDIVQRDGDVNWRATIVDWPGLGYSARPKMDYDTD 141

[Close]

BLAST of Bhi02G001400 vs. TrEMBL
Match: tr|A0A1S3B353|A0A1S3B353_CUCME (uncharacterized protein LOC103485575 OS=Cucumis melo OX=3656 GN=LOC103485575 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.7e-15
Identity = 43/55 (78.18%), Postives = 47/55 (85.45%), Query Frame = 0


Query: 6   LLTLALISDVGTVEEWRIVARELLQKDSKANGRATIVDRPGLGFSDRPKMDYNTE 61
           +L +  ISDV TVEEWRIVAREL+QKDSK N RATIVD PGLGFSDRPKMDYN +
Sbjct: 91  ILMIPTISDVSTVEEWRIVARELVQKDSKVNWRATIVDWPGLGFSDRPKMDYNAD 145

[Close]

BLAST of Bhi02G001400 vs. TrEMBL
Match: tr|A0A0A0LSR0|A0A0A0LSR0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G033190 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.7e-15
Identity = 43/55 (78.18%), Postives = 47/55 (85.45%), Query Frame = 0


Query: 6   LLTLALISDVGTVEEWRIVARELLQKDSKANGRATIVDRPGLGFSDRPKMDYNTE 61
           +L +  ISDV TVEEWRIVAREL+QKDSK N RATIVD PGLGFSDRPKMDYN +
Sbjct: 91  ILMIPTISDVSTVEEWRIVARELVQKDSKVNWRATIVDWPGLGFSDRPKMDYNAD 145

[Close]

BLAST of Bhi02G001400 vs. TrEMBL
Match: tr|W9QYP2|W9QYP2_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_015940 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.6e-12
Identity = 37/58 (63.79%), Postives = 46/58 (79.31%), Query Frame = 0


Query: 3   SPPLLTLALISDVGTVEEWRIVARELLQKDSKANGRATIVDRPGLGFSDRPKMDYNTE 61
           S  +L +  ISDV TVEEWR VAR+++Q+D K N RATIVD PGLG+SDRPK+DYN +
Sbjct: 87  SKNILLVPTISDVSTVEEWRSVARDIVQRDGKVNWRATIVDWPGLGYSDRPKIDYNAD 144

[Close]

BLAST of Bhi02G001400 vs. TrEMBL
Match: tr|B9R9A2|B9R9A2_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1515100 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.1e-12
Identity = 37/59 (62.71%), Postives = 47/59 (79.66%), Query Frame = 0


Query: 4  PP--LLTLALISDVGTVEEWRIVARELLQKDSKANGRATIVDRPGLGFSDRPKMDYNTE 61
          PP  +L +  ISDV TVEEWR+VAR+++Q+D K N +A IVD PGLG+SDRPKMDYN +
Sbjct: 19 PPKKILMIPTISDVSTVEEWRLVARDIIQRDGKLNWQAMIVDWPGLGYSDRPKMDYNAD 77

[Close]

BLAST of Bhi02G001400 vs. TrEMBL
Match: tr|V4T0Z5|V4T0Z5_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10020174mg PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 4.8e-12
Identity = 36/58 (62.07%), Postives = 46/58 (79.31%), Query Frame = 0


Query: 3   SPPLLTLALISDVGTVEEWRIVARELLQKDSKANGRATIVDRPGLGFSDRPKMDYNTE 61
           S  +L +  ISDV TVEEWR+VA++++Q+  K N RATIVD PGLG+SDRPKMDYN +
Sbjct: 155 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNAD 212

[Close]

BLAST of Bhi02G001400 vs. NCBI nr
Match: XP_022998828.1 (uncharacterized protein LOC111493374 [Cucurbita maxima])

HSP 1 Score: 90.5 bits (223), Expect = 2.4e-15
Identity = 45/59 (76.27%), Postives = 49/59 (83.05%), Query Frame = 0


Query: 4   PP--LLTLALISDVGTVEEWRIVARELLQKDSKANGRATIVDRPGLGFSDRPKMDYNTE 61
           PP  +L +  ISDV TVEEWRIVAREL+QKDSK N RATIVD PGLGFSDRPKMDYN +
Sbjct: 87  PPKDILMIPTISDVSTVEEWRIVARELVQKDSKVNWRATIVDWPGLGFSDRPKMDYNAD 145

[Close]

BLAST of Bhi02G001400 vs. NCBI nr
Match: XP_023525338.1 (uncharacterized protein LOC111788968 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 90.5 bits (223), Expect = 2.4e-15
Identity = 45/59 (76.27%), Postives = 49/59 (83.05%), Query Frame = 0


Query: 4   PP--LLTLALISDVGTVEEWRIVARELLQKDSKANGRATIVDRPGLGFSDRPKMDYNTE 61
           PP  +L +  ISDV TVEEWRIVAREL+QKDSK N RATIVD PGLGFSDRPKMDYN +
Sbjct: 87  PPKDILMIPTISDVSTVEEWRIVARELVQKDSKVNWRATIVDWPGLGFSDRPKMDYNAD 145

[Close]

BLAST of Bhi02G001400 vs. NCBI nr
Match: XP_022949275.1 (uncharacterized protein LOC111452683 [Cucurbita moschata])

HSP 1 Score: 90.1 bits (222), Expect = 3.1e-15
Identity = 45/59 (76.27%), Postives = 49/59 (83.05%), Query Frame = 0


Query: 4   PP--LLTLALISDVGTVEEWRIVARELLQKDSKANGRATIVDRPGLGFSDRPKMDYNTE 61
           PP  +L +  ISDV TVEEWRIVAREL+QKDSK N RATIVD PGLGFSDRPKMDYN +
Sbjct: 87  PPKDILMIPTISDVSTVEEWRIVARELVQKDSKINWRATIVDWPGLGFSDRPKMDYNAD 145

[Close]

BLAST of Bhi02G001400 vs. NCBI nr
Match: XP_004137408.1 (PREDICTED: uncharacterized protein LOC101217261 [Cucumis sativus] >KGN63999.1 hypothetical protein Csa_1G033190 [Cucumis sativus])

HSP 1 Score: 89.7 bits (221), Expect = 4.1e-15
Identity = 43/55 (78.18%), Postives = 47/55 (85.45%), Query Frame = 0


Query: 6   LLTLALISDVGTVEEWRIVARELLQKDSKANGRATIVDRPGLGFSDRPKMDYNTE 61
           +L +  ISDV TVEEWRIVAREL+QKDSK N RATIVD PGLGFSDRPKMDYN +
Sbjct: 91  ILMIPTISDVSTVEEWRIVARELVQKDSKVNWRATIVDWPGLGFSDRPKMDYNAD 145

[Close]

BLAST of Bhi02G001400 vs. NCBI nr
Match: XP_008441502.1 (PREDICTED: uncharacterized protein LOC103485575 [Cucumis melo])

HSP 1 Score: 89.7 bits (221), Expect = 4.1e-15
Identity = 43/55 (78.18%), Postives = 47/55 (85.45%), Query Frame = 0


Query: 6   LLTLALISDVGTVEEWRIVARELLQKDSKANGRATIVDRPGLGFSDRPKMDYNTE 61
           +L +  ISDV TVEEWRIVAREL+QKDSK N RATIVD PGLGFSDRPKMDYN +
Sbjct: 91  ILMIPTISDVSTVEEWRIVARELVQKDSKVNWRATIVDWPGLGFSDRPKMDYNAD 145

The following BLAST results are available for this feature:

BLAST of Bhi02G001400 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi02G001400 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G74640.1	1.9e-14	61.82	alpha/beta-Hydrolases superfamily protein	[more]

BLAST of Bhi02G001400 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B353\|A0A1S3B353_CUCME	2.7e-15	78.18	uncharacterized protein LOC103485575 OS=Cucumis melo OX=3656 GN=LOC103485575 PE=...	[more]
tr\|A0A0A0LSR0\|A0A0A0LSR0_CUCSA	2.7e-15	78.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G033190 PE=4 SV=1	[more]
tr\|W9QYP2\|W9QYP2_9ROSA	1.6e-12	63.79	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_015940 PE=4 SV=1	[more]
tr\|B9R9A2\|B9R9A2_RICCO	2.1e-12	62.71	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1515100 PE=4 SV=1	[more]
tr\|V4T0Z5\|V4T0Z5_9ROSI	4.8e-12	62.07	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10020174mg PE=4 ...	[more]

BLAST of Bhi02G001400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022998828.1	2.4e-15	76.27	uncharacterized protein LOC111493374 [Cucurbita maxima]	[more]
XP_023525338.1	2.4e-15	76.27	uncharacterized protein LOC111788968 [Cucurbita pepo subsp. pepo]	[more]
XP_022949275.1	3.1e-15	76.27	uncharacterized protein LOC111452683 [Cucurbita moschata]	[more]
XP_004137408.1	4.1e-15	78.18	PREDICTED: uncharacterized protein LOC101217261 [Cucumis sativus] >KGN63999.1 hy...	[more]
XP_008441502.1	4.1e-15	78.18	PREDICTED: uncharacterized protein LOC103485575 [Cucumis melo]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi02M001400	Bhi02M001400	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR26374	FAMILY NOT NAMED	coord: 7..60
None	No IPR available	PANTHER	PTHR26374:SF200	ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN	coord: 7..60

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi02G001400	Cucumber (Gy14) v1	cgywgoB280
Bhi02G001400	Cucumber (Gy14) v1	cgywgoB282
Bhi02G001400	Cucumber (Gy14) v2	cgybwgoB079
Bhi02G001400	Cucurbita maxima (Rimu)	cmawgoB0089
Bhi02G001400	Cucurbita maxima (Rimu)	cmawgoB0155
Bhi02G001400	Cucurbita moschata (Rifu)	cmowgoB0072
Bhi02G001400	Cucurbita moschata (Rifu)	cmowgoB0082
Bhi02G001400	Cucurbita moschata (Rifu)	cmowgoB0150
Bhi02G001400	Cucurbita moschata (Rifu)	cmowgoB0159
Bhi02G001400	Cucurbita pepo (Zucchini)	cpewgoB0460
Bhi02G001400	Cucurbita pepo (Zucchini)	cpewgoB0882
Bhi02G001400	Cucurbita pepo (Zucchini)	cpewgoB0901
Bhi02G001400	Wild cucumber (PI 183967)	cpiwgoB083
Bhi02G001400	Cucumber (Chinese Long) v3	cucwgoB089
Bhi02G001400	Cucumber (Chinese Long) v2	cuwgoB081
Bhi02G001400	Bottle gourd (USVL1VR-Ls)	lsiwgoB504
Bhi02G001400	Melon (DHL92) v3.6.1	medwgoB293
Bhi02G001400	Melon (DHL92) v3.5.1	mewgoB293
Bhi02G001400	Watermelon (Charleston Gray)	wcgwgoB362
Bhi02G001400	Watermelon (Charleston Gray)	wcgwgoB367
Bhi02G001400	Watermelon (97103) v2	wgowmbB630
Bhi02G001400	Watermelon (97103) v2	wgowmbB637
Bhi02G001400	Watermelon (97103) v1	wgowmB653
Bhi02G001400	Watermelon (97103) v1	wgowmB659
Bhi02G001400	Silver-seed gourd	carwgoB0221
Bhi02G001400	Silver-seed gourd	carwgoB0222
Bhi02G001400	Silver-seed gourd	carwgoB0568