Bhi02G001098 (gene) Wax gourd

Overview
NameBhi02G001098
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr2 : 32571747 .. 32572169 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTAACGACCCTCTCTCAAATAGTTGAGAAAATAAAGGATAAAAAAGCTACCTCAAGTTCAAGCCTTAAGGGCATACCAAAGATTGATCCAAACCGACCAATCTTCCAACCAAATACCTTTTTCATTGGAGAACTGAAAGGCAATCCAAAGGAACTTCTAGCTGAGATCAATAAGAAATTGTCAGTATTCAAGATTGACAAAGGAGAAGCATACTCTTCAAAGAAGACCAAAGTCTCCAAAGTTGTTAATATGATAAAAGAGTCCAAAGGGACTTTTGCAGAATATACAAAAATCCTTCCTATTGTCTCTTATAGCACAGAAATGAAGAATCATTATGCAAAACCCTTTCCTCCAGATCTAAGATGGGATGATTTTCGTCCAAATCAAAAGACTTATGATGGAACCTCTATTATAAGCTAG

mRNA sequence

ATGCTAACGACCCTCTCTCAAATAGTTGAGAAAATAAAGGATAAAAAAGCTACCTCAAGTTCAAGCCTTAAGGGCATACCAAAGATTGATCCAAACCGACCAATCTTCCAACCAAATACCTTTTTCATTGGAGAACTGAAAGGCAATCCAAAGGAACTTCTAGCTGAGATCAATAAGAAATTGTCAGTATTCAAGATTGACAAAGGAGAAGCATACTCTTCAAAGAAGACCAAAGTCTCCAAAGTTGTTAATATGATAAAAGAGTCCAAAGGGACTTTTGCAGAATATACAAAAATCCTTCCTATTGTCTCTTATAGCACAGAAATGAAGAATCATTATGCAAAACCCTTTCCTCCAGATCTAAGATGGGATGATTTTCGTCCAAATCAAAAGACTTATGATGGAACCTCTATTATAAGCTAG

Coding sequence (CDS)

ATGCTAACGACCCTCTCTCAAATAGTTGAGAAAATAAAGGATAAAAAAGCTACCTCAAGTTCAAGCCTTAAGGGCATACCAAAGATTGATCCAAACCGACCAATCTTCCAACCAAATACCTTTTTCATTGGAGAACTGAAAGGCAATCCAAAGGAACTTCTAGCTGAGATCAATAAGAAATTGTCAGTATTCAAGATTGACAAAGGAGAAGCATACTCTTCAAAGAAGACCAAAGTCTCCAAAGTTGTTAATATGATAAAAGAGTCCAAAGGGACTTTTGCAGAATATACAAAAATCCTTCCTATTGTCTCTTATAGCACAGAAATGAAGAATCATTATGCAAAACCCTTTCCTCCAGATCTAAGATGGGATGATTTTCGTCCAAATCAAAAGACTTATGATGGAACCTCTATTATAAGCTAG

Protein sequence

MLTTLSQIVEKIKDKKATSSSSLKGIPKIDPNRPIFQPNTFFIGELKGNPKELLAEINKKLSVFKIDKGEAYSSKKTKVSKVVNMIKESKGTFAEYTKILPIVSYSTEMKNHYAKPFPPDLRWDDFRPNQKTYDGTSIIS
Homology
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BLAST of Bhi02G001098 vs. NCBI nr
Match: XP_022151716.1 (uncharacterized protein LOC111019629 [Momordica charantia])

HSP 1 Score: 108.2 bits (269), Expect = 2.3e-20
Identity = 57/140 (40.71%), Postives = 93/140 (66.43%), Query Frame = 0 

Query: 1   MLTTLSQIVEKIKDKKATSSSSLKGIPKIDPNRPIFQPNTFFIGELKGNPKELLAEINKK 60
           +L+ +S+ VE+I++    + S    IP +DP +PIFQPN+F IG LK +P +L A+IN++
Sbjct: 35  ILSEVSKAVERIENLVLPTVSK---IPPVDPRQPIFQPNSFKIGPLKEDPSDLFAKINRR 94

Query: 61  LSVFKIDKGEAYSSKKTKVSKVVNMIKESKGTFAEYTKILPIVSYSTEMKNHYAKPFPPD 120
           LS   ++K +  SS+K +V+K +N++          +  + +V+  TE+KNHY +P PPD
Sbjct: 95  LSSLSLNKRD--SSQKNEVAKSINVVATIPTITQASSSTILLVTMHTEVKNHYPRPSPPD 154

Query: 121 LRWDDFRPNQKTYDGTSIIS 141
           + WDD R +Q+TYD +SII+
Sbjct: 155 MGWDDLRHDQRTYDESSIIT 169

The following BLAST results are available for this feature:
BLAST of Bhi02G001098 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi02G001098 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi02G001098 vs. TrEMBL
Match NameE-valueIdentityDescription
BLAST of Bhi02G001098 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022151716.12.3e-2040.71uncharacterized protein LOC111019629 [Momordica charantia][more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi02M001098Bhi02M001098mRNA