Bhi02G001097 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi02G001097
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Polyprotein
Location	chr2 : 32571426 .. 32571698 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTCTAGCTGCTACCGCCTATAGCACTAGAAAAATTGTTTTAAGCACCGTTCACATTCTGGTTTCAGGATTCACAAGAAATCTGAGGAGCTGGTGGCAAAATCAACTTTCTGAACAAGAAAGGCAGACTATCCTAACTGCCACAAAGACAGTTATGGTAAAGCAAGAAGGAAATCCAGGAGCAAGAATTGCCCCAGTGGAGATAATGCAAAATGAACTAGATATGGTTAACTCATTGGTATACACTGCAATGCAACACTTTGTAGGATGA

mRNA sequence

ATGCTTCTAGCTGCTACCGCCTATAGCACTAGAAAAATTGTTTTAAGCACCGTTCACATTCTGGTTTCAGGATTCACAAGAAATCTGAGGAGCTGGTGGCAAAATCAACTTTCTGAACAAGAAAGGCAGACTATCCTAACTGCCACAAAGACAGTTATGGTAAAGCAAGAAGGAAATCCAGGAGCAAGAATTGCCCCAGTGGAGATAATGCAAAATGAACTAGATATGGTTAACTCATTGGTATACACTGCAATGCAACACTTTGTAGGATGA

Coding sequence (CDS)

ATGCTTCTAGCTGCTACCGCCTATAGCACTAGAAAAATTGTTTTAAGCACCGTTCACATTCTGGTTTCAGGATTCACAAGAAATCTGAGGAGCTGGTGGCAAAATCAACTTTCTGAACAAGAAAGGCAGACTATCCTAACTGCCACAAAGACAGTTATGGTAAAGCAAGAAGGAAATCCAGGAGCAAGAATTGCCCCAGTGGAGATAATGCAAAATGAACTAGATATGGTTAACTCATTGGTATACACTGCAATGCAACACTTTGTAGGATGA

Protein sequence

MLLAATAYSTRKIVLSTVHILVSGFTRNLRSWWQNQLSEQERQTILTATKTVMVKQEGNPGARIAPVEIMQNELDMVNSLVYTAMQHFVG

Homology

[Close]

BLAST of Bhi02G001097 vs. TrEMBL
Match: tr|A0A0A0M024|A0A0A0M024_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G434190 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 6.0e-07
Identity = 36/74 (48.65%), Postives = 45/74 (60.81%), Query Frame = 0


Query: 4   AATAYSTRKIVLSTVHILVSGFTRNLRSWWQNQLSEQERQTILTATKTVMVKQEGNPGAR 63
           AA A+S RK +  T  IL+ GF  NLR WW NQL+E +RQ ILTATKT+ VK E      
Sbjct: 422 AAYAFSARKSIYETSQILILGFNGNLRRWWHNQLTEHDRQRILTATKTI-VKTEN----- 481

Query: 64  IAPVEIMQNELDMV 78
            + V +   E DM+
Sbjct: 482 -SSVPVQTEEPDMI 488

[Close]

BLAST of Bhi02G001097 vs. TrEMBL
Match: tr|A0A0A0LWY2|A0A0A0LWY2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G385030 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 5.1e-06
Identity = 31/60 (51.67%), Postives = 40/60 (66.67%), Query Frame = 0


Query: 31 SWWQNQLSEQERQTILTATKTVMVKQEGNPGARIAPVEIMQNELDMVNSLVYTAMQHFVG 90
          SWW NQL+EQ+RQ ILT TKTV VK +G      + V +   E DM+N L+YT  +HF+G
Sbjct: 9  SWWHNQLTEQDRQRILTTTKTV-VKTKG------SSVPVQTEEPDMMNQLLYTMTKHFIG 61

[Close]

BLAST of Bhi02G001097 vs. TrEMBL
Match: tr|A0A0R0KNT4|A0A0R0KNT4_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_03G082700 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.8e-04
Identity = 31/92 (33.70%), Postives = 49/92 (53.26%), Query Frame = 0


Query: 1   MLLAATAYSTRKIVL--STVHILVSGFTRNLRSWWQNQLSEQERQTILTATKTVMVKQEG 60
           M + AT Y T       + + ILV+GF+R L+ WW N L+  E+  I +A KT +     
Sbjct: 50  MTMVATTYQTSHECSEETIIDILVAGFSRQLKGWWDNYLTNDEKSKIYSAVKTDL----- 109

Query: 61  NPGARIAPVEIMQNELDMVNSLVYTAMQHFVG 91
               ++   E  +   D+VN+L++T  QHF+G
Sbjct: 110 --NGKVITNENNKEIPDVVNTLIFTITQHFIG 134

[Close]

BLAST of Bhi02G001097 vs. TrEMBL
Match: tr|A5BG66|A5BG66_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_010889 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.8e-04
Identity = 33/92 (35.87%), Postives = 49/92 (53.26%), Query Frame = 0


Query: 1  MLLAATAY--STRKIVLSTVHILVSGFTRNLRSWWQNQLSEQERQTILTATKTVMVKQEG 60
          M++AA AY   T          LV GFT  L+ WW + LS+ +R+ IL A KT+ +K+EG
Sbjct: 1  MMMAANAYRIKTSNSDFHAAGALVIGFTGLLKGWWDHYLSQNDREYILNAKKTI-IKEEG 60

Query: 61 NPGARIAPVEIMQNELDMVNSLVYTAMQHFVG 91
                    +   E D VN+L++   +HF+G
Sbjct: 61 --------TSVQTYEEDAVNTLIFAITKHFIG 83

[Close]

BLAST of Bhi02G001097 vs. TrEMBL
Match: tr|A5BJS2|A5BJS2_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_021083 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.8e-04
Identity = 33/92 (35.87%), Postives = 49/92 (53.26%), Query Frame = 0


Query: 1  MLLAATAY--STRKIVLSTVHILVSGFTRNLRSWWQNQLSEQERQTILTATKTVMVKQEG 60
          M++AA AY   T          LV GFT  L+ WW + LS+ +R+ IL A KT+ +K+EG
Sbjct: 1  MMMAANAYRIKTSNSDFHAAGALVIGFTGLLKGWWDHYLSQNDREYILNAKKTI-IKEEG 60

Query: 61 NPGARIAPVEIMQNELDMVNSLVYTAMQHFVG 91
                    +   E D VN+L++   +HF+G
Sbjct: 61 --------TSVQTYEEDAVNTLIFAITKHFIG 83

[Close]

BLAST of Bhi02G001097 vs. NCBI nr
Match: XP_022151716.1 (uncharacterized protein LOC111019629 [Momordica charantia])

HSP 1 Score: 82.4 bits (202), Expect = 8.5e-13
Identity = 45/90 (50.00%), Postives = 62/90 (68.89%), Query Frame = 0


Query: 1   MLLAATAYSTRKIVLSTVHILVSGFTRNLRSWWQNQLSEQERQTILTATKTVMVKQEGNP 60
           M++AATA+ST+K VL T  IL+S  + NLRSWW NQL++++R  IL ATK V VKQEG+ 
Sbjct: 187 MMMAATAFSTKKPVLQTAQILISSLSGNLRSWWHNQLTDEDRTKILIATKAV-VKQEGSN 246

Query: 61  GARIAPVEIMQNELDMVNSLVYTAMQHFVG 91
             +I       +E DMVN L+Y   ++F+G
Sbjct: 247 AMQI-------DEPDMVNQLIYAMTKNFIG 268

[Close]

BLAST of Bhi02G001097 vs. NCBI nr
Match: KGN65521.1 (hypothetical protein Csa_1G434190 [Cucumis sativus])

HSP 1 Score: 62.4 bits (150), Expect = 9.1e-07
Identity = 36/74 (48.65%), Postives = 45/74 (60.81%), Query Frame = 0


Query: 4   AATAYSTRKIVLSTVHILVSGFTRNLRSWWQNQLSEQERQTILTATKTVMVKQEGNPGAR 63
           AA A+S RK +  T  IL+ GF  NLR WW NQL+E +RQ ILTATKT+ VK E      
Sbjct: 422 AAYAFSARKSIYETSQILILGFNGNLRRWWHNQLTEHDRQRILTATKTI-VKTEN----- 481

Query: 64  IAPVEIMQNELDMV 78
            + V +   E DM+
Sbjct: 482 -SSVPVQTEEPDMI 488

[Close]

BLAST of Bhi02G001097 vs. NCBI nr
Match: KGN65367.1 (hypothetical protein Csa_1G385030 [Cucumis sativus])

HSP 1 Score: 59.3 bits (142), Expect = 7.7e-06
Identity = 31/60 (51.67%), Postives = 40/60 (66.67%), Query Frame = 0


Query: 31 SWWQNQLSEQERQTILTATKTVMVKQEGNPGARIAPVEIMQNELDMVNSLVYTAMQHFVG 90
          SWW NQL+EQ+RQ ILT TKTV VK +G      + V +   E DM+N L+YT  +HF+G
Sbjct: 9  SWWHNQLTEQDRQRILTTTKTV-VKTKG------SSVPVQTEEPDMMNQLLYTMTKHFIG 61

[Close]

BLAST of Bhi02G001097 vs. NCBI nr
Match: XP_023743558.1 (uncharacterized protein LOC111891720 [Lactuca sativa])

HSP 1 Score: 59.3 bits (142), Expect = 7.7e-06
Identity = 35/89 (39.33%), Postives = 54/89 (60.67%), Query Frame = 0


Query: 3  LAATAYST-RKIVLSTVHILVSGFTRNLRSWWQNQLSEQERQTILTATKTVMVKQEGNPG 62
          +AA AY       L  V+I+ SGFT +L+ WW   +S++E+  IL+A KT+ +KQE N  
Sbjct: 1  MAANAYKAHNNTQLQIVNIITSGFTGSLKGWWDFYISQEEKDYILSAKKTI-IKQENNQ- 60

Query: 63 ARIAPVEIMQNELDMVNSLVYTAMQHFVG 91
                +I   E DMVN+L++  +++FVG
Sbjct: 61 ------QIQTFEDDMVNTLIFAIIKNFVG 81

[Close]

BLAST of Bhi02G001097 vs. NCBI nr
Match: XP_023739051.1 (uncharacterized protein LOC111887111 [Lactuca sativa])

HSP 1 Score: 58.5 bits (140), Expect = 1.3e-05
Identity = 35/89 (39.33%), Postives = 53/89 (59.55%), Query Frame = 0


Query: 3  LAATAYST-RKIVLSTVHILVSGFTRNLRSWWQNQLSEQERQTILTATKTVMVKQEGNPG 62
          +AA AY       L  V+I+ SGFT +L+ WW   +S++E+  IL+A KT+ +KQE N  
Sbjct: 1  MAANAYKAHNNTQLQIVNIITSGFTGSLKGWWDFYISQEEKDYILSAKKTI-IKQENNQ- 60

Query: 63 ARIAPVEIMQNELDMVNSLVYTAMQHFVG 91
                +I   E DMVN+L++   ++FVG
Sbjct: 61 ------QIQTFEDDMVNTLIFAITKNFVG 81

The following BLAST results are available for this feature:

BLAST of Bhi02G001097 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi02G001097 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi02G001097 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0M024\|A0A0A0M024_CUCSA	6.0e-07	48.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G434190 PE=4 SV=1	[more]
tr\|A0A0A0LWY2\|A0A0A0LWY2_CUCSA	5.1e-06	51.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G385030 PE=4 SV=1	[more]
tr\|A0A0R0KNT4\|A0A0R0KNT4_SOYBN	2.8e-04	33.70	Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_03G082700 PE=4 SV=1	[more]
tr\|A5BG66\|A5BG66_VITVI	2.8e-04	35.87	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_010889 PE=4 SV=1	[more]
tr\|A5BJS2\|A5BJS2_VITVI	2.8e-04	35.87	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_021083 PE=4 SV=1	[more]

BLAST of Bhi02G001097 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151716.1	8.5e-13	50.00	uncharacterized protein LOC111019629 [Momordica charantia]	[more]
KGN65521.1	9.1e-07	48.65	hypothetical protein Csa_1G434190 [Cucumis sativus]	[more]
KGN65367.1	7.7e-06	51.67	hypothetical protein Csa_1G385030 [Cucumis sativus]	[more]
XP_023743558.1	7.7e-06	39.33	uncharacterized protein LOC111891720 [Lactuca sativa]	[more]
XP_023739051.1	1.3e-05	39.33	uncharacterized protein LOC111887111 [Lactuca sativa]	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi02M001097	Bhi02M001097	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi02G001097	Cucumber (Gy14) v1	cgywgoB711
Bhi02G001097	Cucumber (Gy14) v2	cgybwgoB103
Bhi02G001097	Cucurbita maxima (Rimu)	cmawgoB0085
Bhi02G001097	Cucurbita maxima (Rimu)	cmawgoB0169
Bhi02G001097	Cucurbita moschata (Rifu)	cmowgoB0078
Bhi02G001097	Cucurbita moschata (Rifu)	cmowgoB0162
Bhi02G001097	Cucurbita pepo (Zucchini)	cpewgoB0019
Bhi02G001097	Cucurbita pepo (Zucchini)	cpewgoB0473
Bhi02G001097	Wild cucumber (PI 183967)	cpiwgoB111
Bhi02G001097	Cucumber (Chinese Long) v3	cucwgoB115
Bhi02G001097	Cucumber (Chinese Long) v2	cuwgoB110
Bhi02G001097	Bottle gourd (USVL1VR-Ls)	lsiwgoB511
Bhi02G001097	Bottle gourd (USVL1VR-Ls)	lsiwgoB521
Bhi02G001097	Melon (DHL92) v3.6.1	medwgoB300
Bhi02G001097	Melon (DHL92) v3.6.1	medwgoB310
Bhi02G001097	Melon (DHL92) v3.5.1	mewgoB300
Bhi02G001097	Melon (DHL92) v3.5.1	mewgoB315
Bhi02G001097	Watermelon (Charleston Gray)	wcgwgoB366
Bhi02G001097	Watermelon (Charleston Gray)	wcgwgoB369
Bhi02G001097	Watermelon (97103) v2	wgowmbB639
Bhi02G001097	Watermelon (97103) v1	wgowmB655
Bhi02G001097	Watermelon (97103) v1	wgowmB661
Bhi02G001097	Silver-seed gourd	carwgoB0646
Bhi02G001097	Silver-seed gourd	carwgoB1136