Bhi02G001076 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi02G001076
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic
Location	chr2 : 31807959 .. 31808826 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCCGAAAACCTAAGGGTTCCTCCACAAGGTTCGTCCACGGAGGGTGAGTCAGGGCCTAAGATCAGGCCGAAAGGCGTAGTTGATGGACAACATATGAATATTCTGTACTACCCCTTATGGTCCTTAGGACGGAGGAGGCTAAGTTAGCCGAAAGATGGTTATCGTTCAAGGACGCAAGGTGCCCCCTGTTTTTTCAGGGTAAGAAGGGGATTAGAGAAAAATACCTCGAGCCAATGTTCGAGTACAAGGCGCTACGACGCTGAAGTAACCCATTCCATACTCCAGGAAAAAGCTCGAACGACCTTTAAACAAAAGGGTAACCTTACCCGAAACCGACAACAGGTGGGTAGGTAGACAATACCTAGGGGCACGAGACAACTCTCTCTGAAGAACTCGGCAAAATAGCCCCGTAACTTCAGGAGAAGGGGTGCCTCCTCACAAAGGGGGTCGCAGTGACCAGGCTCCGAGCGACTGTTTACAAAAAACAGGTCTCCGCAAAGTCGTAAGACCATGTATGGAGGTTAACGCCTTCCCAAGTGCCGGAAGGTCAAGGAAGTTGAGTGACCTGATGACAGAGGAGCCGACGATCGAAGCCCCGGTGAACGGCGACCGTAACTATAATGGTCCTAAGGTAGCGAAATTCCTTACAGGTAAGTTCGACCCGCATGAAAGGCGTAACGATCTGGGCACTGTCTCGAGAGAGGCTCGGTGAAATGGATATATATCTGTGAAGATGCCAACTACCTGCACCTGGACAAAAGACCCTAAGAAGCTTCACTTTCCCTAGGATTGGCTTTGGGCCTTTATTGCAGCTTAGATGGAAGGCAAAGAAGGCCCCCTTCGAGGGGCCCGAGCCATCAGTGA

mRNA sequence

ATGCCCCGAAAACCTAAGGGTTCCTCCACAAGGTTCGTCCACGGAGGGGTAAGAAGGGGATTAGAGAAAAATACCTCGAGCCAATGTTCGAGTACAAGGCGCTACGACGCTGAAGTAACCCATTCCATACTCCAGGAAAAAGCTCGAACGACCTTTAAACAAAAGGGTAACCTTACCCGAAACCGACAACAGGTGGGAGAAGGGGTGCCTCCTCACAAAGGGGGTCGCAGTGACCAGGCTCCGAGCGACTGTTTACAAAAAACAGGTCTCCGCAAAGTCGTAAGACCATGTATGGAGGTTAACGCCTTCCCAAGTGCCGGAAGGTCAAGGAAGTTGAGTGACCTGATGACAGAGGAGCCGACGATCGAAGCCCCGGTGAACGGCGACCGTAACTATAATGGTCCTAAGGTAGCGAAATTCCTTACAGGTAAGTTCGACCCGCATGAAAGGCGTAACGATCTGGGCACTGTCTCGAGAGAGGCTCGCTTAGATGGAAGGCAAAGAAGGCCCCCTTCGAGGGGCCCGAGCCATCAGTGA

Coding sequence (CDS)

ATGCCCCGAAAACCTAAGGGTTCCTCCACAAGGTTCGTCCACGGAGGGGTAAGAAGGGGATTAGAGAAAAATACCTCGAGCCAATGTTCGAGTACAAGGCGCTACGACGCTGAAGTAACCCATTCCATACTCCAGGAAAAAGCTCGAACGACCTTTAAACAAAAGGGTAACCTTACCCGAAACCGACAACAGGTGGGAGAAGGGGTGCCTCCTCACAAAGGGGGTCGCAGTGACCAGGCTCCGAGCGACTGTTTACAAAAAACAGGTCTCCGCAAAGTCGTAAGACCATGTATGGAGGTTAACGCCTTCCCAAGTGCCGGAAGGTCAAGGAAGTTGAGTGACCTGATGACAGAGGAGCCGACGATCGAAGCCCCGGTGAACGGCGACCGTAACTATAATGGTCCTAAGGTAGCGAAATTCCTTACAGGTAAGTTCGACCCGCATGAAAGGCGTAACGATCTGGGCACTGTCTCGAGAGAGGCTCGCTTAGATGGAAGGCAAAGAAGGCCCCCTTCGAGGGGCCCGAGCCATCAGTGA

Protein sequence

MPRKPKGSSTRFVHGGVRRGLEKNTSSQCSSTRRYDAEVTHSILQEKARTTFKQKGNLTRNRQQVGEGVPPHKGGRSDQAPSDCLQKTGLRKVVRPCMEVNAFPSAGRSRKLSDLMTEEPTIEAPVNGDRNYNGPKVAKFLTGKFDPHERRNDLGTVSREARLDGRQRRPPSRGPSHQ

Homology

[Close]

BLAST of Bhi02G001076 vs. TrEMBL
Match: tr|A0A2P5S430|A0A2P5S430_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD09165 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.7e-29
Identity = 90/175 (51.43%), Postives = 99/175 (56.57%), Query Frame = 0


Query: 1   MPRKPKGSSTRFVHGGVRRGLEKNTSSQCSSTRRYDAEVTHSILQEKARTTFKQKGNLTR 60
           MPRKPKGSS RFVHGGVRRG E N  SQCSST+RY AEVTH+IL  KART F ++  +  
Sbjct: 53  MPRKPKGSSARFVHGGVRRGRE-NAPSQCSSTKRYGAEVTHAILPRKARTNFNKRVPVPE 112

Query: 61  NRQQVGEGVPPHKGGRSDQAPSDCLQKTGLRKVVRPCMEVNAFPSAGRSRKLSDLMTEEP 120
                GEGVPPHK GRSDQA +   QK                    RS +     + EP
Sbjct: 113 T--DTGEGVPPHKRGRSDQARAAVYQK-------------------HRSPQ-----SWEP 172

Query: 121 TIEAPVNGDRNYNGPKVAKFLTGKFDPHERRNDLGTVSREARLDGRQRRPPSRGP 176
           T EAPVNG RNYN PKVAKFL G                   L GR+RRPPS GP
Sbjct: 173 TTEAPVNGGRNYNDPKVAKFLVG-------------------LSGRRRRPPSGGP 181

[Close]

BLAST of Bhi02G001076 vs. TrEMBL
Match: tr|A0A2N9F5N4|A0A2N9F5N4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10310 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 5.3e-23
Identity = 79/174 (45.40%), Postives = 87/174 (50.00%), Query Frame = 0


Query: 1   MPRKPKGSSTRFVHGGVRRGLEKNTSSQCSSTRRYDAEVTHSILQEKARTTFKQKGNLTR 60
           MPRKPKGSS RFVHGGVRRG E N SSQCSSTRRY AEVTH+IL  KARTTF ++     
Sbjct: 304 MPRKPKGSSARFVHGGVRRGRE-NASSQCSSTRRYGAEVTHAILPGKARTTFNKR----- 363

Query: 61  NRQQVGEGVPPHKGGRSDQAPSDCLQKTGLRKVVRPCMEVNAFPSAGRSRKLSDLMTEEP 120
                                               C +V         +++ DLMT EP
Sbjct: 364 ------------------------------------CRKV---------KEVGDLMTGEP 407

Query: 121 TIEAPVNGDRNYNGPKVAKFLTGKFDPHERRNDLGTVSREARLDGRQRRPPSRG 175
             EAPVNG RNYNGPKVAKFL G                   L G +RRPPS G
Sbjct: 424 ATEAPVNGGRNYNGPKVAKFLVG-------------------LGGGRRRPPSGG 407

[Close]

BLAST of Bhi02G001076 vs. TrEMBL
Match: tr|A0A2N9HJU4|A0A2N9HJU4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40354 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.6e-22
Identity = 71/143 (49.65%), Postives = 78/143 (54.55%), Query Frame = 0


Query: 1   MPRKPKGSSTRFVHGGVRRGLEKNTSSQCSSTRRYDAEVTHSILQEKARTTFKQKGNLTR 60
           MPRKPKGSS RFVHGGVRRG E N SSQCSSTRRY AEVTH+IL  KARTTF ++     
Sbjct: 304 MPRKPKGSSARFVHGGVRRGRE-NASSQCSSTRRYGAEVTHAILPGKARTTFNKR----- 363

Query: 61  NRQQVGEGVPPHKGGRSDQAPSDCLQKTGLRKVVRPCMEVNAFPSAGRSRKLSDLMTEEP 120
                                               C +V         +++ DLMT EP
Sbjct: 364 ------------------------------------CRKV---------KEVGDLMTGEP 395

Query: 121 TIEAPVNGDRNYNGPKVAKFLTG 144
             EAPVNG RNYNGPKVAKFL G
Sbjct: 424 ATEAPVNGGRNYNGPKVAKFLVG 395

[Close]

BLAST of Bhi02G001076 vs. TrEMBL
Match: tr|A0A2N9GIA5|A0A2N9GIA5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26796 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.6e-22
Identity = 71/143 (49.65%), Postives = 78/143 (54.55%), Query Frame = 0


Query: 1    MPRKPKGSSTRFVHGGVRRGLEKNTSSQCSSTRRYDAEVTHSILQEKARTTFKQKGNLTR 60
            MPRKPKGSS RFVHGGVRRG E N SSQCSSTRRY AEVTH+IL  KARTTF ++     
Sbjct: 1067 MPRKPKGSSARFVHGGVRRGRE-NASSQCSSTRRYGAEVTHAILPGKARTTFNKR----- 1126

Query: 61   NRQQVGEGVPPHKGGRSDQAPSDCLQKTGLRKVVRPCMEVNAFPSAGRSRKLSDLMTEEP 120
                                                C +V         +++ DLMT EP
Sbjct: 1127 ------------------------------------CRKV---------KEVGDLMTGEP 1158

Query: 121  TIEAPVNGDRNYNGPKVAKFLTG 144
              EAPVNG RNYNGPKVAKFL G
Sbjct: 1187 ATEAPVNGGRNYNGPKVAKFLVG 1158

[Close]

BLAST of Bhi02G001076 vs. TrEMBL
Match: tr|A0A2N9I678|A0A2N9I678_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS49399 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.6e-22
Identity = 71/143 (49.65%), Postives = 78/143 (54.55%), Query Frame = 0


Query: 1   MPRKPKGSSTRFVHGGVRRGLEKNTSSQCSSTRRYDAEVTHSILQEKARTTFKQKGNLTR 60
           MPRKPKGSS RFVHGGVRRG E N SSQCSSTRRY AEVTH+IL  KARTTF ++     
Sbjct: 695 MPRKPKGSSARFVHGGVRRGRE-NASSQCSSTRRYGAEVTHAILPGKARTTFNKR----- 754

Query: 61  NRQQVGEGVPPHKGGRSDQAPSDCLQKTGLRKVVRPCMEVNAFPSAGRSRKLSDLMTEEP 120
                                               C +V         +++ DLMT EP
Sbjct: 755 ------------------------------------CRKV---------KEVGDLMTGEP 786

Query: 121 TIEAPVNGDRNYNGPKVAKFLTG 144
             EAPVNG RNYNGPKVAKFL G
Sbjct: 815 ATEAPVNGGRNYNGPKVAKFLVG 786

[Close]

BLAST of Bhi02G001076 vs. NCBI nr
Match: PPD93814.1 (hypothetical protein GOBAR_DD09165 [Gossypium barbadense])

HSP 1 Score: 138.3 bits (347), Expect = 2.6e-29
Identity = 90/175 (51.43%), Postives = 99/175 (56.57%), Query Frame = 0


Query: 1   MPRKPKGSSTRFVHGGVRRGLEKNTSSQCSSTRRYDAEVTHSILQEKARTTFKQKGNLTR 60
           MPRKPKGSS RFVHGGVRRG E N  SQCSST+RY AEVTH+IL  KART F ++  +  
Sbjct: 53  MPRKPKGSSARFVHGGVRRGRE-NAPSQCSSTKRYGAEVTHAILPRKARTNFNKRVPVPE 112

Query: 61  NRQQVGEGVPPHKGGRSDQAPSDCLQKTGLRKVVRPCMEVNAFPSAGRSRKLSDLMTEEP 120
                GEGVPPHK GRSDQA +   QK                    RS +     + EP
Sbjct: 113 T--DTGEGVPPHKRGRSDQARAAVYQK-------------------HRSPQ-----SWEP 172

Query: 121 TIEAPVNGDRNYNGPKVAKFLTGKFDPHERRNDLGTVSREARLDGRQRRPPSRGP 176
           T EAPVNG RNYN PKVAKFL G                   L GR+RRPPS GP
Sbjct: 173 TTEAPVNGGRNYNDPKVAKFLVG-------------------LSGRRRRPPSGGP 181

[Close]

BLAST of Bhi02G001076 vs. NCBI nr
Match: CDY63595.1 (BnaUnng00830D [Brassica napus])

HSP 1 Score: 114.8 bits (286), Expect = 3.1e-22
Identity = 70/146 (47.95%), Postives = 79/146 (54.11%), Query Frame = 0


Query: 1   MPRKPKGSSTRFVHGGVRRGLEKNTSSQCSSTRRYDAEVTHSILQEKARTTFKQKGNLTR 60
           MPRKPKGSS RFVHGGVRRG E N  SQCSSTRRY AEVTH+IL  KARTTF ++     
Sbjct: 53  MPRKPKGSSARFVHGGVRRGRE-NAPSQCSSTRRYGAEVTHAILPGKARTTFNKR----- 112

Query: 61  NRQQVGEGVPPHKGGRSDQAPSDCLQKTGLRKVVRPCMEVNAFPSAGRSRKLSDLMTEEP 120
                                               C +V         +++ DLMT EP
Sbjct: 113 ------------------------------------CRKV---------KEVGDLMTGEP 147

Query: 121 TIEAPVNGDRNYNGPKVAKFLTGKFD 147
             EAPVNG RNYNGPKVAKFL G ++
Sbjct: 173 ATEAPVNGGRNYNGPKVAKFLVGPYE 147

[Close]

BLAST of Bhi02G001076 vs. NCBI nr
Match: CDY20229.1 (BnaC09g30100D [Brassica napus])

HSP 1 Score: 114.8 bits (286), Expect = 3.1e-22
Identity = 70/146 (47.95%), Postives = 79/146 (54.11%), Query Frame = 0


Query: 1   MPRKPKGSSTRFVHGGVRRGLEKNTSSQCSSTRRYDAEVTHSILQEKARTTFKQKGNLTR 60
           MPRKPKGSS RFVHGGVRRG E N  SQCSSTRRY AEVTH+IL  KARTTF ++     
Sbjct: 1   MPRKPKGSSARFVHGGVRRGRE-NAPSQCSSTRRYGAEVTHAILPGKARTTFNKR----- 60

Query: 61  NRQQVGEGVPPHKGGRSDQAPSDCLQKTGLRKVVRPCMEVNAFPSAGRSRKLSDLMTEEP 120
                                               C +V         +++ DLMT EP
Sbjct: 61  ------------------------------------CRKV---------KEVGDLMTGEP 95

Query: 121 TIEAPVNGDRNYNGPKVAKFLTGKFD 147
             EAPVNG RNYNGPKVAKFL G ++
Sbjct: 121 ATEAPVNGGRNYNGPKVAKFLVGPYE 95

[Close]

BLAST of Bhi02G001076 vs. NCBI nr
Match: CDY19655.1 (BnaC09g29110D [Brassica napus])

HSP 1 Score: 114.8 bits (286), Expect = 3.1e-22
Identity = 70/146 (47.95%), Postives = 79/146 (54.11%), Query Frame = 0


Query: 1   MPRKPKGSSTRFVHGGVRRGLEKNTSSQCSSTRRYDAEVTHSILQEKARTTFKQKGNLTR 60
           MPRKPKGSS RFVHGGVRRG E N  SQCSSTRRY AEVTH+IL  KARTTF ++     
Sbjct: 53  MPRKPKGSSARFVHGGVRRGRE-NAPSQCSSTRRYGAEVTHAILPGKARTTFNKR----- 112

Query: 61  NRQQVGEGVPPHKGGRSDQAPSDCLQKTGLRKVVRPCMEVNAFPSAGRSRKLSDLMTEEP 120
                                               C +V         +++ DLMT EP
Sbjct: 113 ------------------------------------CRKV---------KEVGDLMTGEP 147

Query: 121 TIEAPVNGDRNYNGPKVAKFLTGKFD 147
             EAPVNG RNYNGPKVAKFL G ++
Sbjct: 173 ATEAPVNGGRNYNGPKVAKFLVGPYE 147

[Close]

BLAST of Bhi02G001076 vs. NCBI nr
Match: CDY19666.1 (BnaC09g29220D [Brassica napus])

HSP 1 Score: 114.8 bits (286), Expect = 3.1e-22
Identity = 70/146 (47.95%), Postives = 79/146 (54.11%), Query Frame = 0


Query: 1   MPRKPKGSSTRFVHGGVRRGLEKNTSSQCSSTRRYDAEVTHSILQEKARTTFKQKGNLTR 60
           MPRKPKGSS RFVHGGVRRG E N  SQCSSTRRY AEVTH+IL  KARTTF ++     
Sbjct: 53  MPRKPKGSSARFVHGGVRRGRE-NAPSQCSSTRRYGAEVTHAILPGKARTTFNKR----- 112

Query: 61  NRQQVGEGVPPHKGGRSDQAPSDCLQKTGLRKVVRPCMEVNAFPSAGRSRKLSDLMTEEP 120
                                               C +V         +++ DLMT EP
Sbjct: 113 ------------------------------------CRKV---------KEVGDLMTGEP 147

Query: 121 TIEAPVNGDRNYNGPKVAKFLTGKFD 147
             EAPVNG RNYNGPKVAKFL G ++
Sbjct: 173 ATEAPVNGGRNYNGPKVAKFLVGPYE 147

The following BLAST results are available for this feature:

BLAST of Bhi02G001076 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi02G001076 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi02G001076 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2P5S430\|A0A2P5S430_GOSBA	1.7e-29	51.43	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD09165 PE=4 SV...	[more]
tr\|A0A2N9F5N4\|A0A2N9F5N4_FAGSY	5.3e-23	45.40	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10310 PE=4 SV=1	[more]
tr\|A0A2N9HJU4\|A0A2N9HJU4_FAGSY	1.6e-22	49.65	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40354 PE=4 SV=1	[more]
tr\|A0A2N9GIA5\|A0A2N9GIA5_FAGSY	1.6e-22	49.65	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26796 PE=4 SV=1	[more]
tr\|A0A2N9I678\|A0A2N9I678_FAGSY	1.6e-22	49.65	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS49399 PE=4 SV=1	[more]

BLAST of Bhi02G001076 vs. NCBI nr


Match Name	E-value	Identity	Description
PPD93814.1	2.6e-29	51.43	hypothetical protein GOBAR_DD09165 [Gossypium barbadense]	[more]
CDY63595.1	3.1e-22	47.95	BnaUnng00830D [Brassica napus]	[more]
CDY20229.1	3.1e-22	47.95	BnaC09g30100D [Brassica napus]	[more]
CDY19655.1	3.1e-22	47.95	BnaC09g29110D [Brassica napus]	[more]
CDY19666.1	3.1e-22	47.95	BnaC09g29220D [Brassica napus]	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi02M001076	Bhi02M001076	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..171

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi02G001076	Cucumber (Gy14) v1	cgywgoB791
Bhi02G001076	Cucumber (Gy14) v2	cgybwgoB100
Bhi02G001076	Cucumber (Gy14) v2	cgybwgoB113
Bhi02G001076	Cucurbita maxima (Rimu)	cmawgoB0085
Bhi02G001076	Cucurbita maxima (Rimu)	cmawgoB0169
Bhi02G001076	Cucurbita moschata (Rifu)	cmowgoB0162
Bhi02G001076	Cucurbita pepo (Zucchini)	cpewgoB0899
Bhi02G001076	Wild cucumber (PI 183967)	cpiwgoB113
Bhi02G001076	Cucumber (Chinese Long) v3	cucwgoB118
Bhi02G001076	Cucumber (Chinese Long) v2	cuwgoB111
Bhi02G001076	Bottle gourd (USVL1VR-Ls)	lsiwgoB511
Bhi02G001076	Bottle gourd (USVL1VR-Ls)	lsiwgoB521
Bhi02G001076	Bottle gourd (USVL1VR-Ls)	lsiwgoB531
Bhi02G001076	Melon (DHL92) v3.6.1	medwgoB302
Bhi02G001076	Melon (DHL92) v3.6.1	medwgoB310
Bhi02G001076	Melon (DHL92) v3.5.1	mewgoB302
Bhi02G001076	Melon (DHL92) v3.5.1	mewgoB316
Bhi02G001076	Watermelon (Charleston Gray)	wcgwgoB371
Bhi02G001076	Watermelon (97103) v2	wgowmbB640
Bhi02G001076	Silver-seed gourd	carwgoB1057