Bhi02G000596 (gene) Wax gourd

NameBhi02G000596
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionF-box protein PP2-B10-like
Locationchr2 : 15895689 .. 15896102 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGACAAAAAGGGAAGCAATTTTGTAATATGGTATGATGATGGCGTAGCAGAGGATCATTTGAATTTTTTTTTTTTTTTTTTAAAAGAGGTCATTTGGCATTTTGGGTCATCCACACAAATTTTCCAAAGAAATTGTCAAGTTCTCTTCGCATCGGAATGAGTAATAGCCAACAACTTGTCGCTGACGACTCCATCAATGCCTGCAGATCATCGGGGATTTCTTAGACTTTCTATGCGGTTGCTCAGTCAGATATCGCCTGGGAGAGGTTCATTCCTTCCGATTATGATGTTTTGATCTCTCAAATGAAACCTGATGATCTGACTGTTAGTCCGACCTCGAGTTCCAAGAAGGATTTTTTCTTCTCTCTTTGTGATACTCCGATGCTCATTGATGACTGCAACAAAGTAA

mRNA sequence

ATGGAAGACAAAAAGGGAAGCAATTTTGTAATATGGTATGATGATGGCACTTTCTATGCGGTTGCTCAGTCAGATATCGCCTGGGAGAGGTTCATTCCTTCCGATTATGATGTTTTGATCTCTCAAATGAAACCTGATGATCTGACTGTTAGTCCGACCTCGAGTTCCAAGAAGGATTTTTTCTTCTCTCTTTGTGATACTCCGATGCTCATTGATGACTGCAACAAAGTAA

Coding sequence (CDS)

ATGGAAGACAAAAAGGGAAGCAATTTTGTAATATGGTATGATGATGGCACTTTCTATGCGGTTGCTCAGTCAGATATCGCCTGGGAGAGGTTCATTCCTTCCGATTATGATGTTTTGATCTCTCAAATGAAACCTGATGATCTGACTGTTAGTCCGACCTCGAGTTCCAAGAAGGATTTTTTCTTCTCTCTTTGTGATACTCCGATGCTCATTGATGACTGCAACAAAGTAA

Protein sequence

MEDKKGSNFVIWYDDGTFYAVAQSDIAWERFIPSDYDVLISQMKPDDLTVSPTSSSKKDFFFSLCDTPMLIDDCNKV
BLAST of Bhi02G000596 vs. Swiss-Prot
Match: sp|Q9ZVQ6|P2B10_ARATH (F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 5.3e-07
Identity = 27/60 (45.00%), Postives = 37/60 (61.67%), Query Frame = 0

Query: 17 TFYAVAQSDIAWERFIPSDYDVLISQMKPDDLTVSPTSSSKKDFFFSLCDTPMLIDDCNK 76
          TF +  +SDI WE+F+P+DY+ LI          S   SSKK+ +FSLC+ P+L DD  K
Sbjct: 43 TFESTVKSDIIWEKFLPADYESLIPP--------SRVFSSKKELYFSLCNDPVLFDDDKK 94

BLAST of Bhi02G000596 vs. Swiss-Prot
Match: sp|Q9ZVQ8|PP2B8_ARATH (Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 5.3e-07
Identity = 27/60 (45.00%), Postives = 37/60 (61.67%), Query Frame = 0

Query: 17  TFYAVAQSDIAWERFIPSDYDVLISQMKPDDLTVSPTSSSKKDFFFSLCDTPMLIDDCNK 76
           TF +  +SDI WE+FIP +Y+ LISQ +           SKK+ +F+LCD  +LIDD  K
Sbjct: 65  TFASAVKSDIVWEKFIPPEYESLISQSRAFKFL------SKKELYFALCDKSVLIDDGKK 118

BLAST of Bhi02G000596 vs. Swiss-Prot
Match: sp|Q9FV02|SKIP3_ARATH (F-box protein SKIP3 OS=Arabidopsis thaliana OX=3702 GN=SKIP3 PE=1 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 5.3e-07
Identity = 26/56 (46.43%), Postives = 37/56 (66.07%), Query Frame = 0

Query: 18  FYAVAQSDIAWERFIPSDYDVLISQMKPDDLTVSPTSSSKKDFFFSLCDTPMLIDD 74
           F +  +SDI WE+F+P+DY+ LI        T S   SSKK+ +FSLC+ P+LI+D
Sbjct: 54  FESAVKSDIVWEKFLPTDYESLI--------TPSRVFSSKKELYFSLCNDPLLIED 101

BLAST of Bhi02G000596 vs. Swiss-Prot
Match: sp|Q9ZVQ9|PP2B7_ARATH (F-box protein PP2-B7 OS=Arabidopsis thaliana OX=3702 GN=PP2B7 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 2.6e-06
Identity = 27/60 (45.00%), Postives = 37/60 (61.67%), Query Frame = 0

Query: 17  TFYAVAQSDIAWERFIPSDYDVLISQMKPDDLTVSPTSSSKKDFFFSLCDTPMLIDDCNK 76
           TF +  QSDI WE+FIP +Y+ L+S+        S   SSKK+ FF+LCD  +LI+   K
Sbjct: 69  TFESAVQSDIVWEKFIPPEYESLLSR--------SQHFSSKKELFFALCDESVLINVSKK 120

BLAST of Bhi02G000596 vs. Swiss-Prot
Match: sp|Q9ZVR5|PP2B2_ARATH (Putative F-box protein PP2-B2 OS=Arabidopsis thaliana OX=3702 GN=PP2B2 PE=4 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 5.9e-06
Identity = 23/60 (38.33%), Postives = 35/60 (58.33%), Query Frame = 0

Query: 17  TFYAVAQSDIAWERFIPSDYDVLISQMKPDDLTVSPTSSSKKDFFFSLCDTPMLIDDCNK 76
           TF +   SD  W++F+PSDY  L+          S   SSKK+ +F++CD P+L++D  K
Sbjct: 76  TFESAVNSDSVWDKFLPSDYSSLVPP--------SRVFSSKKELYFAICDNPVLVEDGGK 127

BLAST of Bhi02G000596 vs. TAIR10
Match: AT2G02340.1 (phloem protein 2-B8)

HSP 1 Score: 54.7 bits (130), Expect = 3.0e-08
Identity = 27/60 (45.00%), Postives = 37/60 (61.67%), Query Frame = 0

Query: 17  TFYAVAQSDIAWERFIPSDYDVLISQMKPDDLTVSPTSSSKKDFFFSLCDTPMLIDDCNK 76
           TF +  +SDI WE+FIP +Y+ LISQ +           SKK+ +F+LCD  +LIDD  K
Sbjct: 65  TFASAVKSDIVWEKFIPPEYESLISQSRAFKFL------SKKELYFALCDKSVLIDDGKK 118

BLAST of Bhi02G000596 vs. TAIR10
Match: AT2G02360.1 (phloem protein 2-B10)

HSP 1 Score: 54.7 bits (130), Expect = 3.0e-08
Identity = 27/60 (45.00%), Postives = 37/60 (61.67%), Query Frame = 0

Query: 17 TFYAVAQSDIAWERFIPSDYDVLISQMKPDDLTVSPTSSSKKDFFFSLCDTPMLIDDCNK 76
          TF +  +SDI WE+F+P+DY+ LI          S   SSKK+ +FSLC+ P+L DD  K
Sbjct: 43 TFESTVKSDIIWEKFLPADYESLIPP--------SRVFSSKKELYFSLCNDPVLFDDDKK 94

BLAST of Bhi02G000596 vs. TAIR10
Match: AT2G02320.1 (phloem protein 2-B7)

HSP 1 Score: 52.4 bits (124), Expect = 1.5e-07
Identity = 27/60 (45.00%), Postives = 37/60 (61.67%), Query Frame = 0

Query: 17  TFYAVAQSDIAWERFIPSDYDVLISQMKPDDLTVSPTSSSKKDFFFSLCDTPMLIDDCNK 76
           TF +  QSDI WE+FIP +Y+ L+S+        S   SSKK+ FF+LCD  +LI+   K
Sbjct: 69  TFESAVQSDIVWEKFIPPEYESLLSR--------SQHFSSKKELFFALCDESVLINVSKK 120

BLAST of Bhi02G000596 vs. TAIR10
Match: AT2G02250.1 (phloem protein 2-B2)

HSP 1 Score: 51.2 bits (121), Expect = 3.3e-07
Identity = 23/60 (38.33%), Postives = 35/60 (58.33%), Query Frame = 0

Query: 17  TFYAVAQSDIAWERFIPSDYDVLISQMKPDDLTVSPTSSSKKDFFFSLCDTPMLIDDCNK 76
           TF +   SD  W++F+PSDY  L+          S   SSKK+ +F++CD P+L++D  K
Sbjct: 76  TFESAVNSDSVWDKFLPSDYSSLVPP--------SRVFSSKKELYFAICDNPVLVEDGGK 127

BLAST of Bhi02G000596 vs. TAIR10
Match: AT2G02240.1 (F-box family protein)

HSP 1 Score: 48.9 bits (115), Expect = 1.6e-06
Identity = 22/60 (36.67%), Postives = 36/60 (60.00%), Query Frame = 0

Query: 17  TFYAVAQSDIAWERFIPSDYDVLISQMKPDDLTVSPTSSSKKDFFFSLCDTPMLIDDCNK 76
           TF +   SD  W++F+P +Y+ L+S+        S   +SKK+ +F+LC  P+LI+D  K
Sbjct: 90  TFESAVSSDCVWDKFLPPEYESLVSR--------SRVFASKKELYFALCHNPVLIEDGKK 141

BLAST of Bhi02G000596 vs. TrEMBL
Match: tr|A0A1S3BWT7|A0A1S3BWT7_CUCME (F-box protein PP2-B10-like OS=Cucumis melo OX=3656 GN=LOC103494288 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 4.4e-14
Identity = 37/60 (61.67%), Postives = 48/60 (80.00%), Query Frame = 0

Query: 17  TFYAVAQSDIAWERFIPSDYDVLISQMKPDDLTVSPTSSSKKDFFFSLCDTPMLIDDCNK 76
           TF A AQSDI W+ F+P+D+++LIS+ KP +L   P SSSKK+ FFSLCDTP++IDD NK
Sbjct: 42  TFVAAAQSDIVWDSFLPTDWEILISRRKPSNLNFDPISSSKKEIFFSLCDTPLIIDDGNK 101

BLAST of Bhi02G000596 vs. TrEMBL
Match: tr|A0A0A0LWS1|A0A0A0LWS1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G421890 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 9.7e-14
Identity = 37/60 (61.67%), Postives = 47/60 (78.33%), Query Frame = 0

Query: 17  TFYAVAQSDIAWERFIPSDYDVLISQMKPDDLTVSPTSSSKKDFFFSLCDTPMLIDDCNK 76
           TF A AQSDI W+ F+P+D+++LIS+ KP +L   P SSSKK  FFSLCDTP++IDD NK
Sbjct: 42  TFVAAAQSDIVWDSFLPTDWEILISRRKPSNLNFDPISSSKKGIFFSLCDTPLIIDDGNK 101

BLAST of Bhi02G000596 vs. TrEMBL
Match: tr|A0A0A0LZQ3|A0A0A0LZQ3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G421910 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.4e-12
Identity = 40/57 (70.18%), Postives = 46/57 (80.70%), Query Frame = 0

Query: 17  TFYAVAQSDIAWERFIPSDYDVLISQMKPDDLTVSPTSSSKKDFFFSLCDTPMLIDD 74
           TF+A AQSD+AWERFIPSDY +LIS+M       +PTSSSKKD FFSL DTP+LIDD
Sbjct: 58  TFHAAAQSDVAWERFIPSDYHLLISRM-------NPTSSSKKDIFFSLSDTPLLIDD 107

BLAST of Bhi02G000596 vs. TrEMBL
Match: tr|A0A1S3BWQ1|A0A1S3BWQ1_CUCME (F-box protein PP2-B10-like OS=Cucumis melo OX=3656 GN=LOC103494283 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.4e-12
Identity = 35/60 (58.33%), Postives = 46/60 (76.67%), Query Frame = 0

Query: 17  TFYAVAQSDIAWERFIPSDYDVLISQMKPDDLTVSPTSSSKKDFFFSLCDTPMLIDDCNK 76
           TF+A AQSD+ W  F+P+D+++LIS++KP+ L   P SS KKD FFSLC  P+LIDD NK
Sbjct: 43  TFHAAAQSDVVWNEFLPADWELLISRLKPNKLKFDPVSSPKKDIFFSLCYFPVLIDDGNK 102

BLAST of Bhi02G000596 vs. TrEMBL
Match: tr|A0A1S4DZH9|A0A1S4DZH9_CUCME (F-box protein PP2-B10-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494286 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 7.0e-12
Identity = 37/71 (52.11%), Postives = 50/71 (70.42%), Query Frame = 0

Query: 7  SNFVIWYDDGTFYAVAQSDIAWERFIPSDYDVLISQMKPDDLTVSPTSSSKKDFFFSLCD 66
          S+ V W     F+A AQSDI W+RF+P+D D LIS+ KP  L   P +SSKK+ FFSLC+
Sbjct: 33 SSAVSW----VFHAAAQSDIVWDRFLPNDLDDLISRSKPGGLNFDPITSSKKEIFFSLCN 92

Query: 67 TPMLIDDCNKV 78
          +P+LID+  K+
Sbjct: 93 SPLLIDNAKKL 99

BLAST of Bhi02G000596 vs. NCBI nr
Match: XP_008453631.1 (PREDICTED: F-box protein PP2-B10-like [Cucumis melo])

HSP 1 Score: 85.9 bits (211), Expect = 6.6e-14
Identity = 37/60 (61.67%), Postives = 48/60 (80.00%), Query Frame = 0

Query: 17  TFYAVAQSDIAWERFIPSDYDVLISQMKPDDLTVSPTSSSKKDFFFSLCDTPMLIDDCNK 76
           TF A AQSDI W+ F+P+D+++LIS+ KP +L   P SSSKK+ FFSLCDTP++IDD NK
Sbjct: 42  TFVAAAQSDIVWDSFLPTDWEILISRRKPSNLNFDPISSSKKEIFFSLCDTPLIIDDGNK 101

BLAST of Bhi02G000596 vs. NCBI nr
Match: XP_004146303.1 (PREDICTED: F-box protein PP2-B10-like [Cucumis sativus] >KGN65429.1 hypothetical protein Csa_1G421890 [Cucumis sativus])

HSP 1 Score: 84.7 bits (208), Expect = 1.5e-13
Identity = 37/60 (61.67%), Postives = 47/60 (78.33%), Query Frame = 0

Query: 17  TFYAVAQSDIAWERFIPSDYDVLISQMKPDDLTVSPTSSSKKDFFFSLCDTPMLIDDCNK 76
           TF A AQSDI W+ F+P+D+++LIS+ KP +L   P SSSKK  FFSLCDTP++IDD NK
Sbjct: 42  TFVAAAQSDIVWDSFLPTDWEILISRRKPSNLNFDPISSSKKGIFFSLCDTPLIIDDGNK 101

BLAST of Bhi02G000596 vs. NCBI nr
Match: XP_022135496.1 (F-box protein PP2-B10-like [Momordica charantia])

HSP 1 Score: 84.0 bits (206), Expect = 2.5e-13
Identity = 37/60 (61.67%), Postives = 46/60 (76.67%), Query Frame = 0

Query: 17  TFYAVAQSDIAWERFIPSDYDVLISQMKPDDLTVSPTSSSKKDFFFSLCDTPMLIDDCNK 76
           TF+A AQSDI W+RF+P+D+  L+S+ KP DL   P SSSKK+ FFSLCD P+LIDD  K
Sbjct: 52  TFHAAAQSDIVWDRFLPTDWHDLVSRAKPSDLNFDPASSSKKEIFFSLCDRPLLIDDGKK 111

BLAST of Bhi02G000596 vs. NCBI nr
Match: XP_022929417.1 (F-box protein PP2-B10-like [Cucurbita moschata])

HSP 1 Score: 83.6 bits (205), Expect = 3.3e-13
Identity = 38/59 (64.41%), Postives = 46/59 (77.97%), Query Frame = 0

Query: 18  FYAVAQSDIAWERFIPSDYDVLISQMKPDDLTVSPTSSSKKDFFFSLCDTPMLIDDCNK 77
           F++ AQSDI W RF+P D DVLIS+ K DDL   P SSSKK+ FFSLCD+PML+DD +K
Sbjct: 42  FHSAAQSDIVWSRFLPPDLDVLISRSKSDDLDFDPISSSKKNIFFSLCDSPMLLDDGDK 100

BLAST of Bhi02G000596 vs. NCBI nr
Match: XP_022929404.1 (F-box protein PP2-B10-like [Cucurbita moschata])

HSP 1 Score: 82.4 bits (202), Expect = 7.3e-13
Identity = 37/61 (60.66%), Postives = 45/61 (73.77%), Query Frame = 0

Query: 16  GTFYAVAQSDIAWERFIPSDYDVLISQMKPDDLTVSPTSSSKKDFFFSLCDTPMLIDDCN 75
           GTF+A AQSDI W  F+P D++ L+S+ K  DL   P SSSKK+ FFSLCD P+LIDD N
Sbjct: 40  GTFHAAAQSDILWNNFLPIDWESLVSRRKTSDLNFDPISSSKKEIFFSLCDCPLLIDDGN 99

Query: 76  K 77
           K
Sbjct: 100 K 100

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
sp|Q9ZVQ6|P2B10_ARATH5.3e-0745.00F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1[more]
sp|Q9ZVQ8|PP2B8_ARATH5.3e-0745.00Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1[more]
sp|Q9FV02|SKIP3_ARATH5.3e-0746.43F-box protein SKIP3 OS=Arabidopsis thaliana OX=3702 GN=SKIP3 PE=1 SV=2[more]
sp|Q9ZVQ9|PP2B7_ARATH2.6e-0645.00F-box protein PP2-B7 OS=Arabidopsis thaliana OX=3702 GN=PP2B7 PE=2 SV=1[more]
sp|Q9ZVR5|PP2B2_ARATH5.9e-0638.33Putative F-box protein PP2-B2 OS=Arabidopsis thaliana OX=3702 GN=PP2B2 PE=4 SV=2[more]
Match NameE-valueIdentityDescription
AT2G02340.13.0e-0845.00phloem protein 2-B8[more]
AT2G02360.13.0e-0845.00phloem protein 2-B10[more]
AT2G02320.11.5e-0745.00phloem protein 2-B7[more]
AT2G02250.13.3e-0738.33phloem protein 2-B2[more]
AT2G02240.11.6e-0636.67F-box family protein[more]
Match NameE-valueIdentityDescription
tr|A0A1S3BWT7|A0A1S3BWT7_CUCME4.4e-1461.67F-box protein PP2-B10-like OS=Cucumis melo OX=3656 GN=LOC103494288 PE=4 SV=1[more]
tr|A0A0A0LWS1|A0A0A0LWS1_CUCSA9.7e-1461.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G421890 PE=4 SV=1[more]
tr|A0A0A0LZQ3|A0A0A0LZQ3_CUCSA1.4e-1270.18Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G421910 PE=4 SV=1[more]
tr|A0A1S3BWQ1|A0A1S3BWQ1_CUCME2.4e-1258.33F-box protein PP2-B10-like OS=Cucumis melo OX=3656 GN=LOC103494283 PE=4 SV=1[more]
tr|A0A1S4DZH9|A0A1S4DZH9_CUCME7.0e-1252.11F-box protein PP2-B10-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494286 PE... [more]
Match NameE-valueIdentityDescription
XP_008453631.16.6e-1461.67PREDICTED: F-box protein PP2-B10-like [Cucumis melo][more]
XP_004146303.11.5e-1361.67PREDICTED: F-box protein PP2-B10-like [Cucumis sativus] >KGN65429.1 hypothetical... [more]
XP_022135496.12.5e-1361.67F-box protein PP2-B10-like [Momordica charantia][more]
XP_022929417.13.3e-1364.41F-box protein PP2-B10-like [Cucurbita moschata][more]
XP_022929404.17.3e-1360.66F-box protein PP2-B10-like [Cucurbita moschata][more]

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi02M000596Bhi02M000596mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR32278FAMILY NOT NAMEDcoord: 17..76
NoneNo IPR availablePANTHERPTHR32278:SF6F-BOX PROTEIN PP2-B1-RELATEDcoord: 17..76