Bhi02G000319 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi02G000319
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Ribulose bisphosphate carboxylase large chain
Location	chr2 : 7787383 .. 7788142 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAACTTAGCGCATGACCAATTCCATTTCAACCACTTCCACTGCGGAATACGACTTCGGCAAATGAGAAAACTAGCACCAAAGACCTACAACGCAACTAAAAATACATCACACCTCGCCCACAAAGATCACCACTCTGGACTGGACAGACCACCACGGGATAGACCTCCTGAGGATGGGGACAGATACAGATCCAAGCTGGAGAGCATTATAATGAATAACGTAATGCATGACTACTTAACAGGTGGATTCACTGCAAATACTAGCTTGGCTCATTATTGCCGAGATAATGGTCTACTTCTTCACATTCACTGTGCAATGCATGCCGTTATTGATAGACAGAAGAATCATGATATGCACTTCCGTGTACTAGCTAAAGCGTTACGTATGTCTGGTGGAGACCATATTCACGCTGGTACCGTAGTAGGTAAACTTGAAGGGGAAAGAGAAATCACTTTAGGCTTTGTTGATTTACTACGTGATGATTTTATTGAAAAAGACCGAAACCGCGGTATTTATTTCACTCAAGATTGGGTCCCTTTACCAGGTGTTCTACCAGTGGCTTCCGGTGGTATTCACGTTTGGCATATGCCTACTCTAACCCCCTAAAAAACGACGTGTGTAAAAATAAACATTGAAGAGAAATTTCAAGAGAAATAAATAATTCAATGATTTGATCAAAAAAATATTACTATGGTTCGAGAGAAAATAAGAGTATCGACTCGGACACTAAAGTGGAAGTGTGTTGAATCAAGAG

mRNA sequence

ATGAAGAACTTAGCGCATGACCAATTCCATTTCAACCACTTCCACTGCGGAATACGACTTCGGCAAATGAGAAAACTAGCACCAAAGACCTACAACGCAACTAAAAATACATCACACCTCGCCCACAAAGATCACCACTCTGGACTGGACAGACCACCACGGGATAGACCTCCTGAGGATGGGGACAGATACAGATCCAAGCTGGAGAGCATTATAATGAATAACGTAATGCATGACTACTTAACAGGTGGATTCACTGCAAATACTAGCTTGGCTCATTATTGCCGAGATAATGGTCTACTTCTTCACATTCACTGTGCAATGCATGCCGTTATTGATAGACAGAAGAATCATGATATGCACTTCCGTGTACTAGCTAAAGCGTTACGTATGTCTGGTGGAGACCATATTCACGCTGGTACCGTAGTAGGTAAACTTGAAGGGGAAAGAGAAATCACTTTAGGCTTTGTTGATTTACTACGTGATGATTTTATTGAAAAAGACCGAAACCGCGGTATTTATTTCACTCAAGATTGGGTCCCTTTACCAGGTGTTCTACCAGTGGCTTCCGGTGGTATTCACGTTTGGCATATGCCTACTCTAACCCCCTAAAAAACGACGTGTGTAAAAATAAACATTGAAGAGAAATTTCAAGAGAAATAAATAATTCAATGATTTGATCAAAAAAATATTACTATGGTTCGAGAGAAAATAAGAGTATCGACTCGGACACTAAAGTGGAAGTGTGTTGAATCAAGAG

Coding sequence (CDS)

ATGAAGAACTTAGCGCATGACCAATTCCATTTCAACCACTTCCACTGCGGAATACGACTTCGGCAAATGAGAAAACTAGCACCAAAGACCTACAACGCAACTAAAAATACATCACACCTCGCCCACAAAGATCACCACTCTGGACTGGACAGACCACCACGGGATAGACCTCCTGAGGATGGGGACAGATACAGATCCAAGCTGGAGAGCATTATAATGAATAACGTAATGCATGACTACTTAACAGGTGGATTCACTGCAAATACTAGCTTGGCTCATTATTGCCGAGATAATGGTCTACTTCTTCACATTCACTGTGCAATGCATGCCGTTATTGATAGACAGAAGAATCATGATATGCACTTCCGTGTACTAGCTAAAGCGTTACGTATGTCTGGTGGAGACCATATTCACGCTGGTACCGTAGTAGGTAAACTTGAAGGGGAAAGAGAAATCACTTTAGGCTTTGTTGATTTACTACGTGATGATTTTATTGAAAAAGACCGAAACCGCGGTATTTATTTCACTCAAGATTGGGTCCCTTTACCAGGTGTTCTACCAGTGGCTTCCGGTGGTATTCACGTTTGGCATATGCCTACTCTAACCCCCTAA

Protein sequence

MKNLAHDQFHFNHFHCGIRLRQMRKLAPKTYNATKNTSHLAHKDHHSGLDRPPRDRPPEDGDRYRSKLESIIMNNVMHDYLTGGFTANTSLAHYCRDNGLLLHIHCAMHAVIDRQKNHDMHFRVLAKALRMSGGDHIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRNRGIYFTQDWVPLPGVLPVASGGIHVWHMPTLTP

Homology

[Close]

BLAST of Bhi02G000319 vs. Swiss-Prot
Match: sp|P28418|RBL_GEUQU (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Geum quellyon OX=3762 GN=rbcL PE=3 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 3.8e-68
Identity = 122/127 (96.06%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 76  VMHDYLTGGFTANTSLAHYCRDNGLLLHIHCAMHAVIDRQKNHDMHFRVLAKALRMSGGD 135
           VMHDYLTGGFTANTSLAHYCRDNGLLLHIH AMHAVIDRQKNH MHFRVLAKALRMSGGD
Sbjct: 255 VMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRMSGGD 314

Query: 136 HIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRNRGIYFTQDWVPLPGVLPVASGGIHV 195
           HIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDR+RGIYFTQDWV LPGVLPVASGGIHV
Sbjct: 315 HIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRSRGIYFTQDWVSLPGVLPVASGGIHV 374

Query: 196 WHMPTLT 203
           WHMP LT
Sbjct: 375 WHMPALT 381

[Close]

BLAST of Bhi02G000319 vs. Swiss-Prot
Match: sp|Q01873|RBL_LIQST (Ribulose bisphosphate carboxylase large chain OS=Liquidambar styraciflua OX=4400 GN=rbcL PE=3 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 3.8e-68
Identity = 122/127 (96.06%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 76  VMHDYLTGGFTANTSLAHYCRDNGLLLHIHCAMHAVIDRQKNHDMHFRVLAKALRMSGGD 135
           VMHDYLTGGFTANTSLAHYCRDNGLLLHIH AMHAVIDRQKNH MHFRVLAKALRMSGGD
Sbjct: 265 VMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRMSGGD 324

Query: 136 HIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRNRGIYFTQDWVPLPGVLPVASGGIHV 195
           HIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDR+RGIYFTQDWV LPGVLPVASGGIHV
Sbjct: 325 HIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRSRGIYFTQDWVSLPGVLPVASGGIHV 384

Query: 196 WHMPTLT 203
           WHMP LT
Sbjct: 385 WHMPALT 391

[Close]

BLAST of Bhi02G000319 vs. Swiss-Prot
Match: sp|P27064|RBL_CUCSA (Ribulose bisphosphate carboxylase large chain OS=Cucumis sativus OX=3659 GN=rbcL PE=1 SV=5)

HSP 1 Score: 258.8 bits (660), Expect = 4.9e-68
Identity = 121/127 (95.28%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 76  VMHDYLTGGFTANTSLAHYCRDNGLLLHIHCAMHAVIDRQKNHDMHFRVLAKALRMSGGD 135
           VMHDYLTGGFTANTSLAHYCRDNGLLLHIH AMHAVIDRQKNH MHFRVLAKALRMSGGD
Sbjct: 265 VMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRMSGGD 324

Query: 136 HIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRNRGIYFTQDWVPLPGVLPVASGGIHV 195
           HIHAGTVVGKLEGEREITLGFVDLLRDDF+EKDR+RGIYFTQDWV LPGVLPVASGGIHV
Sbjct: 325 HIHAGTVVGKLEGEREITLGFVDLLRDDFVEKDRSRGIYFTQDWVSLPGVLPVASGGIHV 384

Query: 196 WHMPTLT 203
           WHMP LT
Sbjct: 385 WHMPALT 391

[Close]

BLAST of Bhi02G000319 vs. Swiss-Prot
Match: sp|P28426|RBL_ILECR (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Ilex crenata OX=4296 GN=rbcL PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 4.9e-68
Identity = 121/127 (95.28%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 76  VMHDYLTGGFTANTSLAHYCRDNGLLLHIHCAMHAVIDRQKNHDMHFRVLAKALRMSGGD 135
           VMHDYLTGGFTANTSLAHYCRDNGLLLHIH AMHAVIDRQKNH MHFRVLAKALRMSGGD
Sbjct: 255 VMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRMSGGD 314

Query: 136 HIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRNRGIYFTQDWVPLPGVLPVASGGIHV 195
           HIHAGTVVGKLEGEREITLGFVDLLRDDF+EKDR+RGIYFTQDWV LPGVLPVASGGIHV
Sbjct: 315 HIHAGTVVGKLEGEREITLGFVDLLRDDFVEKDRSRGIYFTQDWVSLPGVLPVASGGIHV 374

Query: 196 WHMPTLT 203
           WHMP LT
Sbjct: 375 WHMPALT 381

[Close]

BLAST of Bhi02G000319 vs. Swiss-Prot
Match: sp|P28450|RBL_SANCA (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Sanguinaria canadensis OX=3472 GN=rbcL PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 4.9e-68
Identity = 121/127 (95.28%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 76  VMHDYLTGGFTANTSLAHYCRDNGLLLHIHCAMHAVIDRQKNHDMHFRVLAKALRMSGGD 135
           VMHDYLTGGFTANTSLAHYCRDNGLLLHIH AMHAVIDRQKNH MHFRVLAKALRMSGGD
Sbjct: 255 VMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRMSGGD 314

Query: 136 HIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRNRGIYFTQDWVPLPGVLPVASGGIHV 195
           HIHAGTVVGKLEGEREITLGFVDLLRDDF+EKDR+RGIYFTQDWV LPGVLPVASGGIHV
Sbjct: 315 HIHAGTVVGKLEGEREITLGFVDLLRDDFVEKDRSRGIYFTQDWVSLPGVLPVASGGIHV 374

Query: 196 WHMPTLT 203
           WHMP LT
Sbjct: 375 WHMPALT 381

[Close]

BLAST of Bhi02G000319 vs. TAIR10
Match: ATCG00490.1 (ribulose-bisphosphate carboxylases)

HSP 1 Score: 250.4 bits (638), Expect = 9.7e-67
Identity = 115/127 (90.55%), Postives = 122/127 (96.06%), Query Frame = 0


Query: 76  VMHDYLTGGFTANTSLAHYCRDNGLLLHIHCAMHAVIDRQKNHDMHFRVLAKALRMSGGD 135
           VMHDYLTGGFTANTSL+HYCRDNGLLLHIH AMHAVIDRQKNH MHFRVLAKALR+SGGD
Sbjct: 265 VMHDYLTGGFTANTSLSHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRLSGGD 324

Query: 136 HIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRNRGIYFTQDWVPLPGVLPVASGGIHV 195
           HIHAGTVVGKLEG+RE TLGFVDLLRDD++EKDR+RGI+FTQDWV LPGVLPVASGGIHV
Sbjct: 325 HIHAGTVVGKLEGDRESTLGFVDLLRDDYVEKDRSRGIFFTQDWVSLPGVLPVASGGIHV 384

Query: 196 WHMPTLT 203
           WHMP LT
Sbjct: 385 WHMPALT 391

[Close]

BLAST of Bhi02G000319 vs. TAIR10
Match: AT2G07732.1 (Ribulose bisphosphate carboxylase large chain, catalytic domain)

HSP 1 Score: 42.0 bits (97), Expect = 5.2e-04
Identity = 18/18 (100.00%), Postives = 18/18 (100.00%), Query Frame = 0


Query: 76  VMHDYLTGGFTANTSLAH 94
           VMHDYLTGGFTANTSLAH
Sbjct: 97  VMHDYLTGGFTANTSLAH 114

[Close]

BLAST of Bhi02G000319 vs. TrEMBL
Match: tr|A0A1C9HGR6|A0A1C9HGR6_PRACL (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Praxelis clematidea OX=287011 GN=rbcL PE=3 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.0e-66
Identity = 123/127 (96.85%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 76  VMHDYLTGGFTANTSLAHYCRDNGLLLHIHCAMHAVIDRQKNHDMHFRVLAKALRMSGGD 135
           VMHDYLTGGFTANTSLAHYCRDNGLLLHIH AMHAVIDRQKNH MHFRVLAKALRMSGGD
Sbjct: 235 VMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRMSGGD 294

Query: 136 HIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRNRGIYFTQDWVPLPGVLPVASGGIHV 195
           HIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRNRGIYFTQDWV LPGVLPVASGGIHV
Sbjct: 295 HIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRNRGIYFTQDWVSLPGVLPVASGGIHV 354

Query: 196 WHMPTLT 203
           WHMP LT
Sbjct: 355 WHMPALT 361

[Close]

BLAST of Bhi02G000319 vs. TrEMBL
Match: tr|W8S147|W8S147_PRACL (Ribulose bisphosphate carboxylase large chain OS=Praxelis clematidea OX=287011 GN=rbcL PE=3 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.0e-66
Identity = 123/127 (96.85%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 76  VMHDYLTGGFTANTSLAHYCRDNGLLLHIHCAMHAVIDRQKNHDMHFRVLAKALRMSGGD 135
           VMHDYLTGGFTANTSLAHYCRDNGLLLHIH AMHAVIDRQKNH MHFRVLAKALRMSGGD
Sbjct: 265 VMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRMSGGD 324

Query: 136 HIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRNRGIYFTQDWVPLPGVLPVASGGIHV 195
           HIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRNRGIYFTQDWV LPGVLPVASGGIHV
Sbjct: 325 HIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRNRGIYFTQDWVSLPGVLPVASGGIHV 384

Query: 196 WHMPTLT 203
           WHMP LT
Sbjct: 385 WHMPALT 391

[Close]

BLAST of Bhi02G000319 vs. TrEMBL
Match: tr|A0A2K9RJW1|A0A2K9RJW1_LAMGA (Ribulose bisphosphate carboxylase large chain OS=Lamium galeobdolon OX=53161 GN=rbcL PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 3.4e-66
Identity = 122/127 (96.06%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 76  VMHDYLTGGFTANTSLAHYCRDNGLLLHIHCAMHAVIDRQKNHDMHFRVLAKALRMSGGD 135
           VMHDYLTGGFTANTSLAHYCRDNGLLLHIH AMHAVIDRQKNH MHFRVLAKALRMSGGD
Sbjct: 265 VMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRMSGGD 324

Query: 136 HIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRNRGIYFTQDWVPLPGVLPVASGGIHV 195
           HIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRNRGIYFTQDWV LPGV+PVASGGIHV
Sbjct: 325 HIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRNRGIYFTQDWVSLPGVIPVASGGIHV 384

Query: 196 WHMPTLT 203
           WHMP LT
Sbjct: 385 WHMPALT 391

[Close]

BLAST of Bhi02G000319 vs. TrEMBL
Match: tr|A0A0F7EW42|A0A0F7EW42_LAMGA (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Lamium galeobdolon OX=53161 GN=rbcL PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 3.4e-66
Identity = 122/127 (96.06%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 76  VMHDYLTGGFTANTSLAHYCRDNGLLLHIHCAMHAVIDRQKNHDMHFRVLAKALRMSGGD 135
           VMHDYLTGGFTANTSLAHYCRDNGLLLHIH AMHAVIDRQKNH MHFRVLAKALRMSGGD
Sbjct: 258 VMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRMSGGD 317

Query: 136 HIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRNRGIYFTQDWVPLPGVLPVASGGIHV 195
           HIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRNRGIYFTQDWV LPGV+PVASGGIHV
Sbjct: 318 HIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRNRGIYFTQDWVSLPGVIPVASGGIHV 377

Query: 196 WHMPTLT 203
           WHMP LT
Sbjct: 378 WHMPALT 384

[Close]

BLAST of Bhi02G000319 vs. TrEMBL
Match: tr|R4GUA0|R4GUA0_DELBI (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Delilia biflora OX=183020 GN=rbcL PE=3 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 4.5e-66
Identity = 122/127 (96.06%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 76  VMHDYLTGGFTANTSLAHYCRDNGLLLHIHCAMHAVIDRQKNHDMHFRVLAKALRMSGGD 135
           VMHDYLTGGFTANTSLAHYCRDNGLLLHIH AMHAVIDRQKNH MHFRVLAKALRMSGGD
Sbjct: 248 VMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRMSGGD 307

Query: 136 HIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRNRGIYFTQDWVPLPGVLPVASGGIHV 195
           HIH+GTVVGKLEGEREITLGFVDLLRDDFIEKDRNRGIYFTQDWV LPGVLPVASGGIHV
Sbjct: 308 HIHSGTVVGKLEGEREITLGFVDLLRDDFIEKDRNRGIYFTQDWVSLPGVLPVASGGIHV 367

Query: 196 WHMPTLT 203
           WHMP LT
Sbjct: 368 WHMPALT 374

[Close]

BLAST of Bhi02G000319 vs. NCBI nr
Match: YP_009020751.1 (ribulose 1,5-bisphosphate carboxylase/oxygenase large subunit (chloroplast) [Praxelis clematidea] >AHM02411.1 ribulose 1,5-bisphosphate carboxylase/oxygenase large subunit (chloroplast) [Praxelis clematidea])

HSP 1 Score: 261.2 bits (666), Expect = 3.0e-66
Identity = 123/127 (96.85%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 76  VMHDYLTGGFTANTSLAHYCRDNGLLLHIHCAMHAVIDRQKNHDMHFRVLAKALRMSGGD 135
           VMHDYLTGGFTANTSLAHYCRDNGLLLHIH AMHAVIDRQKNH MHFRVLAKALRMSGGD
Sbjct: 265 VMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRMSGGD 324

Query: 136 HIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRNRGIYFTQDWVPLPGVLPVASGGIHV 195
           HIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRNRGIYFTQDWV LPGVLPVASGGIHV
Sbjct: 325 HIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRNRGIYFTQDWVSLPGVLPVASGGIHV 384

Query: 196 WHMPTLT 203
           WHMP LT
Sbjct: 385 WHMPALT 391

[Close]

BLAST of Bhi02G000319 vs. NCBI nr
Match: AOO78416.1 (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (chloroplast) [Praxelis clematidea])

HSP 1 Score: 261.2 bits (666), Expect = 3.0e-66
Identity = 123/127 (96.85%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 76  VMHDYLTGGFTANTSLAHYCRDNGLLLHIHCAMHAVIDRQKNHDMHFRVLAKALRMSGGD 135
           VMHDYLTGGFTANTSLAHYCRDNGLLLHIH AMHAVIDRQKNH MHFRVLAKALRMSGGD
Sbjct: 235 VMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRMSGGD 294

Query: 136 HIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRNRGIYFTQDWVPLPGVLPVASGGIHV 195
           HIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRNRGIYFTQDWV LPGVLPVASGGIHV
Sbjct: 295 HIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRNRGIYFTQDWVSLPGVLPVASGGIHV 354

Query: 196 WHMPTLT 203
           WHMP LT
Sbjct: 355 WHMPALT 361

[Close]

BLAST of Bhi02G000319 vs. NCBI nr
Match: AKG25194.1 (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (plastid) [Lamium galeobdolon])

HSP 1 Score: 260.4 bits (664), Expect = 5.2e-66
Identity = 122/127 (96.06%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 76  VMHDYLTGGFTANTSLAHYCRDNGLLLHIHCAMHAVIDRQKNHDMHFRVLAKALRMSGGD 135
           VMHDYLTGGFTANTSLAHYCRDNGLLLHIH AMHAVIDRQKNH MHFRVLAKALRMSGGD
Sbjct: 258 VMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRMSGGD 317

Query: 136 HIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRNRGIYFTQDWVPLPGVLPVASGGIHV 195
           HIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRNRGIYFTQDWV LPGV+PVASGGIHV
Sbjct: 318 HIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRNRGIYFTQDWVSLPGVIPVASGGIHV 377

Query: 196 WHMPTLT 203
           WHMP LT
Sbjct: 378 WHMPALT 384

[Close]

BLAST of Bhi02G000319 vs. NCBI nr
Match: YP_009461129.1 (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (plastid) [Lamium galeobdolon] >AUT82410.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (plastid) [Lamium galeobdolon])

HSP 1 Score: 260.4 bits (664), Expect = 5.2e-66
Identity = 122/127 (96.06%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 76  VMHDYLTGGFTANTSLAHYCRDNGLLLHIHCAMHAVIDRQKNHDMHFRVLAKALRMSGGD 135
           VMHDYLTGGFTANTSLAHYCRDNGLLLHIH AMHAVIDRQKNH MHFRVLAKALRMSGGD
Sbjct: 265 VMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRMSGGD 324

Query: 136 HIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRNRGIYFTQDWVPLPGVLPVASGGIHV 195
           HIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRNRGIYFTQDWV LPGV+PVASGGIHV
Sbjct: 325 HIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRNRGIYFTQDWVSLPGVIPVASGGIHV 384

Query: 196 WHMPTLT 203
           WHMP LT
Sbjct: 385 WHMPALT 391

[Close]

BLAST of Bhi02G000319 vs. NCBI nr
Match: BAJ16712.1 (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (chloroplast) [Eupatorium sp. SH-2010])

HSP 1 Score: 260.0 bits (663), Expect = 6.7e-66
Identity = 122/127 (96.06%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 76  VMHDYLTGGFTANTSLAHYCRDNGLLLHIHCAMHAVIDRQKNHDMHFRVLAKALRMSGGD 135
           VMHDYLTGGFTANTSLAHYCRDNGLLLHIH AMHAVIDRQKNH MHFRVLAKALRMSGGD
Sbjct: 187 VMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRMSGGD 246

Query: 136 HIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRNRGIYFTQDWVPLPGVLPVASGGIHV 195
           HIH+GTVVGKLEGEREITLGFVDLLRDDFIEKDRNRGIYFTQDWV LPGVLPVASGGIHV
Sbjct: 247 HIHSGTVVGKLEGEREITLGFVDLLRDDFIEKDRNRGIYFTQDWVSLPGVLPVASGGIHV 306

Query: 196 WHMPTLT 203
           WHMP LT
Sbjct: 307 WHMPALT 313

The following BLAST results are available for this feature:

BLAST of Bhi02G000319 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P28418\|RBL_GEUQU	3.8e-68	96.06	Ribulose bisphosphate carboxylase large chain (Fragment) OS=Geum quellyon OX=376...	[more]
sp\|Q01873\|RBL_LIQST	3.8e-68	96.06	Ribulose bisphosphate carboxylase large chain OS=Liquidambar styraciflua OX=4400...	[more]
sp\|P27064\|RBL_CUCSA	4.9e-68	95.28	Ribulose bisphosphate carboxylase large chain OS=Cucumis sativus OX=3659 GN=rbcL...	[more]
sp\|P28426\|RBL_ILECR	4.9e-68	95.28	Ribulose bisphosphate carboxylase large chain (Fragment) OS=Ilex crenata OX=4296...	[more]
sp\|P28450\|RBL_SANCA	4.9e-68	95.28	Ribulose bisphosphate carboxylase large chain (Fragment) OS=Sanguinaria canadens...	[more]

BLAST of Bhi02G000319 vs. TAIR10


Match Name	E-value	Identity	Description
ATCG00490.1	9.7e-67	90.55	ribulose-bisphosphate carboxylases	[more]
AT2G07732.1	5.2e-04	100.00	Ribulose bisphosphate carboxylase large chain, catalytic domain	[more]

BLAST of Bhi02G000319 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1C9HGR6\|A0A1C9HGR6_PRACL	2.0e-66	96.85	Ribulose bisphosphate carboxylase large chain (Fragment) OS=Praxelis clematidea ...	[more]
tr\|W8S147\|W8S147_PRACL	2.0e-66	96.85	Ribulose bisphosphate carboxylase large chain OS=Praxelis clematidea OX=287011 G...	[more]
tr\|A0A2K9RJW1\|A0A2K9RJW1_LAMGA	3.4e-66	96.06	Ribulose bisphosphate carboxylase large chain OS=Lamium galeobdolon OX=53161 GN=...	[more]
tr\|A0A0F7EW42\|A0A0F7EW42_LAMGA	3.4e-66	96.06	Ribulose bisphosphate carboxylase large chain (Fragment) OS=Lamium galeobdolon O...	[more]
tr\|R4GUA0\|R4GUA0_DELBI	4.5e-66	96.06	Ribulose bisphosphate carboxylase large chain (Fragment) OS=Delilia biflora OX=1...	[more]

BLAST of Bhi02G000319 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009020751.1	3.0e-66	96.85	ribulose 1,5-bisphosphate carboxylase/oxygenase large subunit (chloroplast) [Pra...	[more]
AOO78416.1	3.0e-66	96.85	ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (chloropl...	[more]
AKG25194.1	5.2e-66	96.06	ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (plastid)...	[more]
YP_009461129.1	5.2e-66	96.06	ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (plastid) [Lamium ...	[more]
BAJ16712.1	6.7e-66	96.06	ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (chloropl...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0000287	magnesium ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036376	RuBisCO_lsu_C_sf
IPR000685	RuBisCO_lsu_C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0009853	photorespiration
biological_process	GO:0019253	reductive pentose-phosphate cycle
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0004497	monooxygenase activity
molecular_function	GO:0016984	ribulose-bisphosphate carboxylase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi02M000319	Bhi02M000319	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000685	Ribulose bisphosphate carboxylase, large subunit, C-terminal	PFAM	PF00016	RuBisCO_large	coord: 71..201 e-value: 9.7E-47 score: 159.5
IPR036376	Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily	GENE3D	G3DSA:3.20.20.110		coord: 57..203 e-value: 3.8E-52 score: 179.2
IPR036376	Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily	SUPERFAMILY	SSF51649	RuBisCo, C-terminal domain	coord: 71..202
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..63
None	No IPR available	PANTHER	PTHR42704:SF2	RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN	coord: 74..202
None	No IPR available	PANTHER	PTHR42704	FAMILY NOT NAMED	coord: 74..202

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi02G000319	Cucumber (Gy14) v1	cgywgoB142
Bhi02G000319	Cucumber (Gy14) v1	cgywgoB417
Bhi02G000319	Cucumber (Gy14) v1	cgywgoB693
Bhi02G000319	Cucumber (Gy14) v2	cgybwgoB082
Bhi02G000319	Cucumber (Gy14) v2	cgybwgoB092
Bhi02G000319	Cucurbita maxima (Rimu)	cmawgoB0088
Bhi02G000319	Cucurbita maxima (Rimu)	cmawgoB0167
Bhi02G000319	Cucurbita maxima (Rimu)	cmawgoB0286
Bhi02G000319	Cucurbita maxima (Rimu)	cmawgoB0548
Bhi02G000319	Cucurbita moschata (Rifu)	cmowgoB0081
Bhi02G000319	Cucurbita moschata (Rifu)	cmowgoB0160
Bhi02G000319	Cucurbita moschata (Rifu)	cmowgoB0276
Bhi02G000319	Cucurbita moschata (Rifu)	cmowgoB0355
Bhi02G000319	Cucurbita moschata (Rifu)	cmowgoB0547
Bhi02G000319	Cucurbita pepo (Zucchini)	cpewgoB0063
Bhi02G000319	Cucurbita pepo (Zucchini)	cpewgoB0459
Bhi02G000319	Cucurbita pepo (Zucchini)	cpewgoB0665
Bhi02G000319	Cucurbita pepo (Zucchini)	cpewgoB0824
Bhi02G000319	Cucurbita pepo (Zucchini)	cpewgoB0883
Bhi02G000319	Wild cucumber (PI 183967)	cpiwgoB088
Bhi02G000319	Wild cucumber (PI 183967)	cpiwgoB098
Bhi02G000319	Wild cucumber (PI 183967)	cpiwgoB356
Bhi02G000319	Cucumber (Chinese Long) v3	cucwgoB093
Bhi02G000319	Cucumber (Chinese Long) v3	cucwgoB103
Bhi02G000319	Cucumber (Chinese Long) v2	cuwgoB086
Bhi02G000319	Cucumber (Chinese Long) v2	cuwgoB095
Bhi02G000319	Bottle gourd (USVL1VR-Ls)	lsiwgoB285
Bhi02G000319	Bottle gourd (USVL1VR-Ls)	lsiwgoB501
Bhi02G000319	Melon (DHL92) v3.6.1	medwgoB195
Bhi02G000319	Melon (DHL92) v3.6.1	medwgoB291
Bhi02G000319	Melon (DHL92) v3.6.1	medwgoB446
Bhi02G000319	Melon (DHL92) v3.5.1	mewgoB193
Bhi02G000319	Melon (DHL92) v3.5.1	mewgoB291
Bhi02G000319	Watermelon (Charleston Gray)	wcgwgoB136
Bhi02G000319	Watermelon (Charleston Gray)	wcgwgoB541
Bhi02G000319	Watermelon (97103) v2	wgowmbB623
Bhi02G000319	Watermelon (97103) v2	wgowmbB649
Bhi02G000319	Watermelon (97103) v1	wgowmB668
Bhi02G000319	Watermelon (97103) v1	wgowmB678
Bhi02G000319	Silver-seed gourd	carwgoB0449
Bhi02G000319	Silver-seed gourd	carwgoB0605
Bhi02G000319	Silver-seed gourd	carwgoB0732
Bhi02G000319	Silver-seed gourd	carwgoB1184