Bhi02G000301 (gene) Wax gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAATATGGCTACTGGATTAAGCAAGATAGCTTAATCATTTCTTGGCTTTTTGAAGTAATGCCGAAGGGCCTTCTTGCTAAAATGCTTGACTACGATTCATCAAAAGAGGTATGGACGGTTCTTAATGCAAGATTTCTTTCCATAATATGGCTCGAGTGCTTGATTTGAAAGGAAAACTAGATGCAATGAAAAAGGAAAATATGAAACTTGAAGAATTTTTCCAGAAAATTAAGAATTGGGTTAATTCCTTGAAGGCTGCTGGAAGAAAGATATCTCATGAAGATCATATAATGCATATTTTGGTCGGATTAGGACTAGAATATGATTCTATGGTATCTGTGATTACTGATAAAGATAAATACCAATCTTTTCAAAAAGTTTATTCTCAACTTCTTGCTCAATAAAACTAGATTAAAAGATATAGCTTTGTGAATCTTGATGGTTCTTTGCCTTGTGTGAATCTAACAACTCAAAGTCAATTAAAGCAATCTACTAATCCTTCTTCTTTTATGACCAGCAATGATGCAAATAGAAGCGGCAAGAATCAAGGAAGCAAGCAAAACAAGAAGTTCTAG ATGGAATATGGCTACTGGATTAAGCAAGATAGCTTAATCATTTCTTGGCTTTTTGAAGTAATGCCGAAGGGCCTTCTTGCTAAAATGCTTGACTACGATTCATCAAAAGAGATTTCTTTCCATAATATGGCTCGAGTGCTTGATTTGAAAGGAAAACTAGATGCAATGAAAAAGGAAAATATGAAACTTGAAGAATTTTTCCAGAAAATTAAGAATTGGGTTAATTCCTTGAAGGCTGCTGGAAGAAAGATATCTCATGAAGATCATATAATGCATATTTTGGTCGGATTAGGACTAGAATATGATTCTATGGTATCTGTGATTACTGATAAAGATAAATACCAATCTTTTCAAAAAATTAAAAGATATAGCTTTGTGAATCTTGATGGTTCTTTGCCTTGTGTGAATCTAACAACTCAAAGTCAATTAAAGCAATCTACTAATCCTTCTTCTTTTATGACCAGCAATGATGCAAATAGAAGCGGCAAGAATCAAGGAAGCAAGCAAAACAAGAAGTTCTAG ATGGAATATGGCTACTGGATTAAGCAAGATAGCTTAATCATTTCTTGGCTTTTTGAAGTAATGCCGAAGGGCCTTCTTGCTAAAATGCTTGACTACGATTCATCAAAAGAGATTTCTTTCCATAATATGGCTCGAGTGCTTGATTTGAAAGGAAAACTAGATGCAATGAAAAAGGAAAATATGAAACTTGAAGAATTTTTCCAGAAAATTAAGAATTGGGTTAATTCCTTGAAGGCTGCTGGAAGAAAGATATCTCATGAAGATCATATAATGCATATTTTGGTCGGATTAGGACTAGAATATGATTCTATGGTATCTGTGATTACTGATAAAGATAAATACCAATCTTTTCAAAAAATTAAAAGATATAGCTTTGTGAATCTTGATGGTTCTTTGCCTTGTGTGAATCTAACAACTCAAAGTCAATTAAAGCAATCTACTAATCCTTCTTCTTTTATGACCAGCAATGATGCAAATAGAAGCGGCAAGAATCAAGGAAGCAAGCAAAACAAGAAGTTCTAG MEYGYWIKQDSLIISWLFEVMPKGLLAKMLDYDSSKEISFHNMARVLDLKGKLDAMKKENMKLEEFFQKIKNWVNSLKAAGRKISHEDHIMHILVGLGLEYDSMVSVITDKDKYQSFQKIKRYSFVNLDGSLPCVNLTTQSQLKQSTNPSSFMTSNDANRSGKNQGSKQNKKF
BLAST of Bhi02G000301 vs. TAIR10
Match: AT5G48050.1 (Retrotransposon gag protein (InterPro:IPR005162)) HSP 1 Score: 48.5 bits (114), Expect = 4.8e-06 Identity = 37/154 (24.03%), Postives = 76/154 (49.35%), Query Frame = 0
BLAST of Bhi02G000301 vs. TAIR10
Match: AT1G34070.1 (Retrotransposon gag protein (InterPro:IPR005162)) HSP 1 Score: 46.2 bits (108), Expect = 2.4e-05 Identity = 29/121 (23.97%), Postives = 63/121 (52.07%), Query Frame = 0
BLAST of Bhi02G000301 vs. TrEMBL
Match: tr|A0A2I0AAC8|A0A2I0AAC8_9ASPA (5'-3' exoribonuclease 2 OS=Apostasia shenzhenica OX=1088818 GN=AXF42_Ash019126 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 7.0e-12 Identity = 37/117 (31.62%), Postives = 68/117 (58.12%), Query Frame = 0
BLAST of Bhi02G000301 vs. TrEMBL
Match: tr|A0A2I0AX36|A0A2I0AX36_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Apostasia shenzhenica OX=1088818 GN=AXF42_Ash009791 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 2.7e-11 Identity = 37/117 (31.62%), Postives = 68/117 (58.12%), Query Frame = 0
BLAST of Bhi02G000301 vs. TrEMBL
Match: tr|A0A2H5PGR9|A0A2H5PGR9_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_135090 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 3.5e-11 Identity = 50/171 (29.24%), Postives = 82/171 (47.95%), Query Frame = 0
BLAST of Bhi02G000301 vs. TrEMBL
Match: tr|A0A2P5F3E2|A0A2P5F3E2_9ROSA (Uncharacterized protein (Fragment) OS=Trema orientalis OX=63057 GN=TorRG33x02_119460 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 4.6e-11 Identity = 35/118 (29.66%), Postives = 71/118 (60.17%), Query Frame = 0
BLAST of Bhi02G000301 vs. TrEMBL
Match: tr|A0A2N9H4Q7|A0A2N9H4Q7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS34700 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 5.9e-11 Identity = 45/172 (26.16%), Postives = 90/172 (52.33%), Query Frame = 0
BLAST of Bhi02G000301 vs. NCBI nr
Match: XP_022154487.1 (uncharacterized protein LOC111021757 [Momordica charantia]) HSP 1 Score: 126.3 bits (316), Expect = 9.9e-26 Identity = 76/184 (41.30%), Postives = 112/184 (60.87%), Query Frame = 0
BLAST of Bhi02G000301 vs. NCBI nr
Match: XP_022136883.1 (dr1-associated corepressor homolog isoform X2 [Momordica charantia]) HSP 1 Score: 117.9 bits (294), Expect = 3.5e-23 Identity = 69/179 (38.55%), Postives = 107/179 (59.78%), Query Frame = 0
BLAST of Bhi02G000301 vs. NCBI nr
Match: XP_022136882.1 (dr1-associated corepressor homolog isoform X1 [Momordica charantia]) HSP 1 Score: 117.9 bits (294), Expect = 3.5e-23 Identity = 69/179 (38.55%), Postives = 107/179 (59.78%), Query Frame = 0
BLAST of Bhi02G000301 vs. NCBI nr
Match: XP_022156747.1 (uncharacterized protein LOC111023586 [Momordica charantia]) HSP 1 Score: 110.5 bits (275), Expect = 5.6e-21 Identity = 73/180 (40.56%), Postives = 100/180 (55.56%), Query Frame = 0
BLAST of Bhi02G000301 vs. NCBI nr
Match: XP_022158089.1 (uncharacterized protein LOC111024658 [Momordica charantia]) HSP 1 Score: 83.2 bits (204), Expect = 9.6e-13 Identity = 45/99 (45.45%), Postives = 67/99 (67.68%), Query Frame = 0
The following BLAST results are available for this feature:
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |