Bhi02G000248 (gene) Wax gourd

Overview
NameBhi02G000248
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionAldose 1-epimerase
Locationchr2 : 6370930 .. 6371214 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGCAAAATCCATAAACAAACCAACCCCAGTAAACTGGCCCAACCACTCTCTGAATCAAGACGCCATCAAGTGGCTGACATTCTATCTACAAAATCAAACTCTTCGCCTCAAAGCCATAACTCCCGTCACATCGAGCTTCAATCCCCACCGTAAATCGTGCCAGTGGCCGAAACGTCCTTTTGATTTCTCAACCCCAACGAGAAGAATCGGGTCCGCGATAAAAAGATCAATAGAGCGAGCGCGGATACGACATAATACGTGTGGACGACACTGGGAGTGA

mRNA sequence

ATGGAAGCAAAATCCATAAACAAACCAACCCCAGTAAACTGGCCCAACCACTCTCTGAATCAAGACGCCATCAAGTGGCTGACATTCTATCTACAAAATCAAACTCTTCGCCTCAAAGCCATAACTCCCGTCACATCGAGCTTCAATCCCCACCGTAAATCGTGCCAGTGGCCGAAACGTCCTTTTGATTTCTCAACCCCAACGAGAAGAATCGGGTCCGCGATAAAAAGATCAATAGAGCGAGCGCGGATACGACATAATACGTGTGGACGACACTGGGAGTGA

Coding sequence (CDS)

ATGGAAGCAAAATCCATAAACAAACCAACCCCAGTAAACTGGCCCAACCACTCTCTGAATCAAGACGCCATCAAGTGGCTGACATTCTATCTACAAAATCAAACTCTTCGCCTCAAAGCCATAACTCCCGTCACATCGAGCTTCAATCCCCACCGTAAATCGTGCCAGTGGCCGAAACGTCCTTTTGATTTCTCAACCCCAACGAGAAGAATCGGGTCCGCGATAAAAAGATCAATAGAGCGAGCGCGGATACGACATAATACGTGTGGACGACACTGGGAGTGA

Protein sequence

MEAKSINKPTPVNWPNHSLNQDAIKWLTFYLQNQTLRLKAITPVTSSFNPHRKSCQWPKRPFDFSTPTRRIGSAIKRSIERARIRHNTCGRHWE
Homology
[Close]
BLAST of Bhi02G000248 vs. TrEMBL
Match: tr|A0A0A0LRN1|A0A0A0LRN1_CUCSA (Aldose 1-epimerase OS=Cucumis sativus OX=3659 GN=Csa_1G009630 PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 8.5e-04
Identity = 34/77 (44.16%), Postives = 40/77 (51.95%), Query Frame = 0 

Query: 1   MEAKSINKPTPVNWPNHSL-NQDAIKWLTFYLQNQTLRLKAITPVTSSFNPHRKSCQWPK 60
           M+A+S+NKPTPVN   HS  N D             L   +ITPV S   P  K     +
Sbjct: 170 MQAESLNKPTPVNLAQHSYWNLDGHSSGNILSHKIKLFASSITPVDSELIPTGKITPVAR 229

Query: 61  RPFDFSTPTRRIGSAIK 77
            PFDF+TP R IGS IK
Sbjct: 230 TPFDFTTP-REIGSQIK 245

The following BLAST results are available for this feature:
BLAST of Bhi02G000248 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi02G000248 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi02G000248 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LRN1|A0A0A0LRN1_CUCSA8.5e-0444.16Aldose 1-epimerase OS=Cucumis sativus OX=3659 GN=Csa_1G009630 PE=3 SV=1[more]
BLAST of Bhi02G000248 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi02M000248Bhi02M000248mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi02G000248Wax gourdwgowgoB122
Bhi02G000248Wax gourdwgowgoB125
Bhi02G000248Cucumber (Gy14) v1cgywgoB144
Bhi02G000248Cucumber (Gy14) v1cgywgoB417
Bhi02G000248Cucumber (Gy14) v1cgywgoB585
Bhi02G000248Cucumber (Gy14) v1cgywgoB693
Bhi02G000248Cucumber (Gy14) v2cgybwgoB082
Bhi02G000248Cucumber (Gy14) v2cgybwgoB092
Bhi02G000248Cucurbita maxima (Rimu)cmawgoB0088
Bhi02G000248Cucurbita maxima (Rimu)cmawgoB0151
Bhi02G000248Cucurbita maxima (Rimu)cmawgoB0916
Bhi02G000248Cucurbita moschata (Rifu)cmowgoB0081
Bhi02G000248Cucurbita moschata (Rifu)cmowgoB0160
Bhi02G000248Cucurbita moschata (Rifu)cmowgoB0355
Bhi02G000248Cucurbita moschata (Rifu)cmowgoB0917
Bhi02G000248Cucurbita pepo (Zucchini)cpewgoB0062
Bhi02G000248Cucurbita pepo (Zucchini)cpewgoB0459
Bhi02G000248Cucurbita pepo (Zucchini)cpewgoB0581
Bhi02G000248Cucurbita pepo (Zucchini)cpewgoB0824
Bhi02G000248Cucurbita pepo (Zucchini)cpewgoB0883
Bhi02G000248Wild cucumber (PI 183967)cpiwgoB088
Bhi02G000248Wild cucumber (PI 183967)cpiwgoB098
Bhi02G000248Wild cucumber (PI 183967)cpiwgoB528
Bhi02G000248Cucumber (Chinese Long) v3cucwgoB103
Bhi02G000248Cucumber (Chinese Long) v3cucwgoB125
Bhi02G000248Cucumber (Chinese Long) v3cucwgoB537
Bhi02G000248Cucumber (Chinese Long) v2cuwgoB086
Bhi02G000248Cucumber (Chinese Long) v2cuwgoB095
Bhi02G000248Cucumber (Chinese Long) v2cuwgoB525
Bhi02G000248Bottle gourd (USVL1VR-Ls)lsiwgoB285
Bhi02G000248Bottle gourd (USVL1VR-Ls)lsiwgoB408
Bhi02G000248Bottle gourd (USVL1VR-Ls)lsiwgoB501
Bhi02G000248Melon (DHL92) v3.6.1medwgoB090
Bhi02G000248Melon (DHL92) v3.6.1medwgoB195
Bhi02G000248Melon (DHL92) v3.6.1medwgoB291
Bhi02G000248Melon (DHL92) v3.6.1medwgoB446
Bhi02G000248Melon (DHL92) v3.5.1mewgoB089
Bhi02G000248Melon (DHL92) v3.5.1mewgoB193
Bhi02G000248Melon (DHL92) v3.5.1mewgoB291
Bhi02G000248Watermelon (Charleston Gray)wcgwgoB256
Bhi02G000248Watermelon (Charleston Gray)wcgwgoB487
Bhi02G000248Watermelon (Charleston Gray)wcgwgoB541
Bhi02G000248Watermelon (97103) v2wgowmbB624
Bhi02G000248Watermelon (97103) v2wgowmbB647
Bhi02G000248Watermelon (97103) v2wgowmbB649
Bhi02G000248Watermelon (97103) v1wgowmB678
Bhi02G000248Silver-seed gourdcarwgoB0449
Bhi02G000248Silver-seed gourdcarwgoB0732